RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
USP11-210ENST00000489030 TRPC5Q9UL62 973 aaPredicted RBP17.3■□□□□ 0.36
USP11-210ENST00000489030 BCL9LQ86UU0 1499 aa17.3■□□□□ 0.36
USP11-210ENST00000489030 PXDNQ92626 1479 aa17.3■□□□□ 0.36
USP11-210ENST00000489030 ATAD2Q6PL18 1390 aa17.29■□□□□ 0.36
USP11-210ENST00000489030 ADGRF5Q8IZF2 1346 aa17.29■□□□□ 0.36
USP11-210ENST00000489030 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
USP11-210ENST00000489030 HFM1A2PYH4 1435 aa17.29■□□□□ 0.36
USP11-210ENST00000489030 COL22A1Q8NFW1 1626 aaPredicted RBP17.29■□□□□ 0.36
USP11-210ENST00000489030 FOXO3O43524 673 aa17.28■□□□□ 0.36
USP11-210ENST00000489030 WAPLQ7Z5K2 1190 aa17.28■□□□□ 0.36
USP11-210ENST00000489030 PPLO60437 1756 aa17.28■□□□□ 0.36
USP11-210ENST00000489030 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
USP11-210ENST00000489030 STK26Q9P289 416 aa17.27■□□□□ 0.36
USP11-210ENST00000489030 RPGRIP1LQ68CZ1 1315 aa17.26■□□□□ 0.35
USP11-210ENST00000489030 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
USP11-210ENST00000489030 CDC42BPGQ6DT37 1551 aa17.25■□□□□ 0.35
USP11-210ENST00000489030 NPHP3Q7Z494 1330 aa17.23■□□□□ 0.35
USP11-210ENST00000489030 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
USP11-210ENST00000489030 EP400Q96L91 3159 aa17.22■□□□□ 0.35
USP11-210ENST00000489030 RGL3Q3MIN7 710 aa17.22■□□□□ 0.35
USP11-210ENST00000489030 GJD4Q96KN9 370 aaPredicted RBP17.21■□□□□ 0.35
USP11-210ENST00000489030 LRPPRCP42704 1394 aaKnown RBP17.2■□□□□ 0.34
USP11-210ENST00000489030 TECPR2O15040 1411 aa17.2■□□□□ 0.34
USP11-210ENST00000489030 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
USP11-210ENST00000489030 GLI3P10071 1580 aa17.19■□□□□ 0.34
USP11-210ENST00000489030 MARF1Q9Y4F3 1742 aaKnown RBP17.18■□□□□ 0.34
USP11-210ENST00000489030 SPATA31A3Q5VYP0 1347 aa17.18■□□□□ 0.34
USP11-210ENST00000489030 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
USP11-210ENST00000489030 SLIT2O94813 1529 aa17.17■□□□□ 0.34
USP11-210ENST00000489030 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
USP11-210ENST00000489030 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
USP11-210ENST00000489030 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
USP11-210ENST00000489030 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
USP11-210ENST00000489030 CABLES1Q8TDN4 633 aa17.16■□□□□ 0.34
USP11-210ENST00000489030 DEFB132Q7Z7B7 95 aa17.15■□□□□ 0.34
USP11-210ENST00000489030 PIK3C2GO75747 1445 aa17.14■□□□□ 0.33
USP11-210ENST00000489030 FMN2Q9NZ56 1722 aa17.14■□□□□ 0.33
USP11-210ENST00000489030 KRT28Q7Z3Y7 464 aa17.14■□□□□ 0.33
USP11-210ENST00000489030 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
USP11-210ENST00000489030 YTHDC2Q9H6S0 1430 aaKnown RBP17.13■□□□□ 0.33
USP11-210ENST00000489030 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
USP11-210ENST00000489030 USP32Q8NFA0 1604 aa17.11■□□□□ 0.33
USP11-210ENST00000489030 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
USP11-210ENST00000489030 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.11■□□□□ 0.33
USP11-210ENST00000489030 CCDC125Q86Z20 511 aa17.11■□□□□ 0.33
USP11-210ENST00000489030 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
USP11-210ENST00000489030 BRWD3Q6RI45 1802 aa17.11■□□□□ 0.33
USP11-210ENST00000489030 ANKRD30BQ9BXX2 1392 aa17.11■□□□□ 0.33
USP11-210ENST00000489030 SEPT12Q8IYM1 358 aa17.1■□□□□ 0.33
USP11-210ENST00000489030 BLMP54132 1417 aaPredicted RBP17.1■□□□□ 0.33
USP11-210ENST00000489030 SAFB2Q14151 953 aaKnown RBP eCLIP17.09■□□□□ 0.33
USP11-210ENST00000489030 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
USP11-210ENST00000489030 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
USP11-210ENST00000489030 RGPD8O14715 1765 aaPredicted RBP17.09■□□□□ 0.33
USP11-210ENST00000489030 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.32
USP11-210ENST00000489030 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
USP11-210ENST00000489030 C14orf93Q9H972 538 aaKnown RBP17.07■□□□□ 0.32
USP11-210ENST00000489030 FAM83GA6ND36 823 aa17.06■□□□□ 0.32
USP11-210ENST00000489030 VPS72Q15906 364 aa17.06■□□□□ 0.32
USP11-210ENST00000489030 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
USP11-210ENST00000489030 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
USP11-210ENST00000489030 PLCH1Q4KWH8 1693 aa17.04■□□□□ 0.32
USP11-210ENST00000489030 ONECUT3O60422 494 aaPredicted RBP17.04■□□□□ 0.32
USP11-210ENST00000489030 LMOD2Q6P5Q4 547 aa17.04■□□□□ 0.32
USP11-210ENST00000489030 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
USP11-210ENST00000489030 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
USP11-210ENST00000489030 ABCA3Q99758 1704 aa17.04■□□□□ 0.32
USP11-210ENST00000489030 HAP1P54257 671 aaPredicted RBP17.03■□□□□ 0.32
USP11-210ENST00000489030 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
USP11-210ENST00000489030 SBNO1A3KN83 1393 aa17.02■□□□□ 0.32
USP11-210ENST00000489030 PSDA5PKW4 1024 aaPredicted RBP17.01■□□□□ 0.31
USP11-210ENST00000489030 PSME1Q06323 249 aa17.01■□□□□ 0.31
USP11-210ENST00000489030 KRT27Q7Z3Y8 459 aa17.01■□□□□ 0.31
USP11-210ENST00000489030 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
USP11-210ENST00000489030 FAM182BQ5T319 152 aa17■□□□□ 0.31
USP11-210ENST00000489030 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
USP11-210ENST00000489030 DHX57Q6P158 1386 aaKnown RBP17■□□□□ 0.31
USP11-210ENST00000489030 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
USP11-210ENST00000489030 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
USP11-210ENST00000489030 NWD2Q9ULI1 1742 aa16.98■□□□□ 0.31
USP11-210ENST00000489030 NRAPQ86VF7 1730 aa16.97■□□□□ 0.31
USP11-210ENST00000489030 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
USP11-210ENST00000489030 ADGRB1O14514 1584 aa16.97■□□□□ 0.31
USP11-210ENST00000489030 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.31
USP11-210ENST00000489030 A0A0G2JS52 829 aa16.96■□□□□ 0.31
USP11-210ENST00000489030 MYT1Q01538 1121 aa16.96■□□□□ 0.31
USP11-210ENST00000489030 SF3B2Q13435 895 aaKnown RBP16.96■□□□□ 0.31
USP11-210ENST00000489030 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
USP11-210ENST00000489030 ANKARQ7Z5J8 1434 aa16.96■□□□□ 0.3
USP11-210ENST00000489030 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.3
USP11-210ENST00000489030 POGKQ9P215 609 aa16.95■□□□□ 0.3
USP11-210ENST00000489030 TRAK1Q9UPV9 953 aa16.95■□□□□ 0.3
USP11-210ENST00000489030 DLC1Q96QB1 1528 aa16.95■□□□□ 0.3
USP11-210ENST00000489030 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
USP11-210ENST00000489030 HRCP23327 699 aa16.93■□□□□ 0.3
USP11-210ENST00000489030 ADGRB2O60241 1585 aa16.93■□□□□ 0.3
USP11-210ENST00000489030 ACIN1Q9UKV3 1341 aaKnown RBP16.93■□□□□ 0.3
USP11-210ENST00000489030 LRP5O75197 1615 aa16.92■□□□□ 0.3
USP11-210ENST00000489030 ALS2Q96Q42 1657 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms