RNA–Protein interactions for RNA: ENST00000488985.1

RPS6KA1-208, Transcript of ribosomal protein S6 kinase A1, human

TSL 3

Gene RPS6KA1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS6KA1-208	ENST00000488985	ASXL1	Q8IXJ9	1541 aa		11.31	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	WAPL	Q7Z5K2	1190 aa		11.31	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	C1orf167	Q5SNV9	1468 aa		11.3	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	SPATA31A6	Q5VVP1	1343 aa		11.3	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	PHLPP1	O60346	1717 aa		11.29	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	TECPR2	O15040	1411 aa		11.29	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	NUTM2F	A1L443	756 aa		11.29	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.29	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	NUTM2E	B1AL46	878 aa	Predicted RBP	11.29	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	MYT1	Q01538	1121 aa		11.29	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	ESCO1	Q5FWF5	840 aa		11.29	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.29	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	LRRC59	Q96AG4	307 aa	Known RBP	11.29	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	NRXN1	Q9ULB1	1477 aa		11.29	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.28	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	PRAM1	Q96QH2	718 aa		11.28	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	TRAK1	Q9UPV9	953 aa		11.28	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	PLEKHH1	Q9ULM0	1364 aa		11.28	□□□□□ -0.6
RPS6KA1-208	ENST00000488985	SETD1A	O15047	1707 aa	Known RBP	11.27	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	DDX17	Q92841	729 aa	Known RBP	11.27	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	SIRT1	Q96EB6	747 aa		11.27	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	ORAI2	Q96SN7	254 aa		11.27	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	NPHP3	Q7Z494	1330 aa		11.27	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	LAMC1	P11047	1609 aa		11.27	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	NALCN	Q8IZF0	1738 aa		11.26	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	SOCS7	O14512	581 aa		11.26	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	CDC42BPG	Q6DT37	1551 aa		11.25	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	COL16A1	Q07092	1604 aa	Predicted RBP	11.25	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	IFT172	Q9UG01	1749 aa		11.25	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	EIF3A	Q14152	1382 aa	Known RBP	11.24	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	CCER2	I3L3R5	266 aa		11.23	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	FOXO3	O43524	673 aa		11.23	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	ZNF772	Q68DY9	489 aa	Predicted RBP	11.23	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.23	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.23	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	XPC	Q01831	940 aa	Predicted RBP	11.22	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	PNPLA6	Q8IY17	1366 aa		11.22	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	DLC1	Q96QB1	1528 aa		11.22	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	KNDC1	Q76NI1	1749 aa		11.21	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	SOS2	Q07890	1332 aa	Predicted RBP	11.21	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	ADAMTS2	O95450	1211 aa		11.21	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	C8orf37	Q96NL8	207 aa		11.21	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	PHF8	Q9UPP1	1060 aa		11.21	□□□□□ -0.61
RPS6KA1-208	ENST00000488985	HAP1	P54257	671 aa	Predicted RBP	11.2	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	PSME1	Q06323	249 aa		11.2	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	LMOD2	Q6P5Q4	547 aa		11.2	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	SIN3A	Q96ST3	1273 aa		11.2	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	LRP6	O75581	1613 aa		11.2	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	ADGRB1	O14514	1584 aa		11.2	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	TONSL	Q96HA7	1378 aa		11.19	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	POTEA	Q6S8J7	498 aa		11.19	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	NGLY1	Q96IV0	654 aa		11.19	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	RGS17	Q9UGC6	210 aa	Predicted RBP	11.19	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	NHSL1	Q5SYE7	1610 aa		11.19	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	AFF2	P51816	1311 aa		11.18	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	WASL	O00401	505 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	KRT28	Q7Z3Y7	464 aa		11.18	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	L3MBTL2	Q969R5	705 aa		11.18	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	ANKAR	Q7Z5J8	1434 aa		11.18	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	SHPRH	Q149N8	1683 aa		11.17	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	PLEKHG5	O94827	1062 aa		11.17	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	NGDN	Q8NEJ9	315 aa	Known RBP	11.17	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	PMFBP1	Q8TBY8	1022 aa		11.17	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	GPRASP1	Q5JY77	1395 aa		11.16	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	NBPF1	Q3BBV0	1214 aa		11.16	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	YTHDC1	Q96MU7	727 aa	Known RBP	11.16	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	ROCK2	O75116	1388 aa	Known RBP	11.16	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.15	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	RXRB	P28702	533 aa		11.15	□□□□□ -0.62
RPS6KA1-208	ENST00000488985	SPATA31A3	Q5VYP0	1347 aa		11.14	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	PXDN	Q92626	1479 aa		11.14	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	SRPK2	P78362	688 aa	Known RBP	11.14	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	FMN2	Q9NZ56	1722 aa		11.14	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	ARHGEF10	O15013	1369 aa		11.14	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	TULP4	Q9NRJ4	1543 aa		11.14	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	KIF1A	Q12756	1690 aa		11.14	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	ADGRB2	O60241	1585 aa		11.13	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	TNS3	Q68CZ2	1445 aa		11.13	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	ANP32C	O43423	234 aa		11.13	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	PAK3	O75914	559 aa	Predicted RBP	11.13	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	CDK19	Q9BWU1	502 aa		11.13	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	USP21	Q9UK80	565 aa		11.13	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	SBNO1	A3KN83	1393 aa		11.13	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	NUDT16	Q96DE0	195 aa	Known RBP	11.12	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	PRR36	Q9H6K5	1346 aa		11.11	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	QTRT2	Q9H974	415 aa	Known RBP	11.11	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	TRPC5	Q9UL62	973 aa	Predicted RBP	11.11	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	RBM6	P78332	1123 aa	Known RBP	11.1	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	CCDC61	Q9Y6R9	512 aa		11.1	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	CARD11	Q9BXL7	1154 aa		11.09	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	CABP2	Q9NPB3	220 aa		11.09	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	KIAA1210	Q9ULL0	1709 aa		11.09	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	EVC2	Q86UK5	1308 aa		11.09	□□□□□ -0.63
RPS6KA1-208	ENST00000488985	CABLES1	Q8TDN4	633 aa		11.08	□□□□□ -0.64
RPS6KA1-208	ENST00000488985	CCDC9	Q9Y3X0	531 aa	Known RBP	11.08	□□□□□ -0.64
RPS6KA1-208	ENST00000488985	ATP7B	P35670	1465 aa		11.07	□□□□□ -0.64
RPS6KA1-208	ENST00000488985	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.07	□□□□□ -0.64
RPS6KA1-208	ENST00000488985	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.06	□□□□□ -0.64
RPS6KA1-208	ENST00000488985	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms