RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 AHDC1Q5TGY3 1603 aaPredicted RBP21.66■■□□□ 1.06
CYTH3-209ENST00000488964 C1orf167Q5SNV9 1468 aa21.66■■□□□ 1.06
CYTH3-209ENST00000488964 PRAM1Q96QH2 718 aa21.66■■□□□ 1.06
CYTH3-209ENST00000488964 TRAK1Q9UPV9 953 aa21.66■■□□□ 1.06
CYTH3-209ENST00000488964 L3MBTL2Q969R5 705 aa21.65■■□□□ 1.06
CYTH3-209ENST00000488964 TONSLQ96HA7 1378 aa21.63■■□□□ 1.05
CYTH3-209ENST00000488964 JCADQ9P266 1359 aa21.63■■□□□ 1.05
CYTH3-209ENST00000488964 PLEKHH1Q9ULM0 1364 aa21.63■■□□□ 1.05
CYTH3-209ENST00000488964 PCGF6Q9BYE7 350 aa21.62■■□□□ 1.05
CYTH3-209ENST00000488964 EIF3AQ14152 1382 aaKnown RBP21.61■■□□□ 1.05
CYTH3-209ENST00000488964 SAFB2Q14151 953 aaKnown RBP eCLIP21.61■■□□□ 1.05
CYTH3-209ENST00000488964 MED1Q15648 1581 aaPredicted RBP21.61■■□□□ 1.05
CYTH3-209ENST00000488964 PHF23Q9BUL5 403 aaPredicted RBP21.6■■□□□ 1.05
CYTH3-209ENST00000488964 COL16A1Q07092 1604 aaPredicted RBP21.59■■□□□ 1.05
CYTH3-209ENST00000488964 ESCO1Q5FWF5 840 aa21.59■■□□□ 1.05
CYTH3-209ENST00000488964 NHSL1Q5SYE7 1610 aa21.58■■□□□ 1.04
CYTH3-209ENST00000488964 FMN2Q9NZ56 1722 aa21.57■■□□□ 1.04
CYTH3-209ENST00000488964 NPHP3Q7Z494 1330 aa21.56■■□□□ 1.04
CYTH3-209ENST00000488964 LRRC59Q96AG4 307 aaKnown RBP21.56■■□□□ 1.04
CYTH3-209ENST00000488964 ADGRB2O60241 1585 aa21.56■■□□□ 1.04
CYTH3-209ENST00000488964 ARHGEF28Q8N1W1 1705 aaKnown RBP21.55■■□□□ 1.04
CYTH3-209ENST00000488964 ORAI2Q96SN7 254 aa21.55■■□□□ 1.04
CYTH3-209ENST00000488964 SPATA31A6Q5VVP1 1343 aa21.55■■□□□ 1.04
CYTH3-209ENST00000488964 NUTM2FA1L443 756 aa21.54■■□□□ 1.04
CYTH3-209ENST00000488964 MINK1Q8N4C8 1332 aaPredicted RBP21.54■■□□□ 1.04
CYTH3-209ENST00000488964 KIF1AQ12756 1690 aa21.53■■□□□ 1.04
CYTH3-209ENST00000488964 ROCK2O75116 1388 aaKnown RBP21.53■■□□□ 1.04
CYTH3-209ENST00000488964 ANKARQ7Z5J8 1434 aa21.53■■□□□ 1.04
CYTH3-209ENST00000488964 CLSPNQ9HAW4 1339 aa21.53■■□□□ 1.04
CYTH3-209ENST00000488964 SHPRHQ149N8 1683 aa21.52■■□□□ 1.04
CYTH3-209ENST00000488964 NBPF1Q3BBV0 1214 aa21.51■■□□□ 1.03
CYTH3-209ENST00000488964 MEX3CQ5U5Q3 659 aaKnown RBP21.5■■□□□ 1.03
CYTH3-209ENST00000488964 HIRIP3Q9BW71 556 aaPredicted RBP21.5■■□□□ 1.03
CYTH3-209ENST00000488964 TRPM1Q7Z4N2 1603 aa21.5■■□□□ 1.03
CYTH3-209ENST00000488964 WASLO00401 505 aaPredicted RBP21.48■■□□□ 1.03
CYTH3-209ENST00000488964 SOS2Q07890 1332 aaPredicted RBP21.48■■□□□ 1.03
CYTH3-209ENST00000488964 CENPJQ9HC77 1338 aaPredicted RBP21.48■■□□□ 1.03
CYTH3-209ENST00000488964 TULP4Q9NRJ4 1543 aa21.47■■□□□ 1.03
CYTH3-209ENST00000488964 FOXO3O43524 673 aa21.47■■□□□ 1.03
CYTH3-209ENST00000488964 DDX17Q92841 729 aaKnown RBP21.47■■□□□ 1.03
CYTH3-209ENST00000488964 PHF8Q9UPP1 1060 aa21.47■■□□□ 1.03
CYTH3-209ENST00000488964 PSME1Q06323 249 aa21.45■■□□□ 1.02
CYTH3-209ENST00000488964 PNPLA6Q8IY17 1366 aa21.43■■□□□ 1.02
CYTH3-209ENST00000488964 RGPD8O14715 1765 aaPredicted RBP21.43■■□□□ 1.02
CYTH3-209ENST00000488964 ITSN1Q15811 1721 aa21.42■■□□□ 1.02
CYTH3-209ENST00000488964 RALGAPBQ86X10 1494 aa21.42■■□□□ 1.02
CYTH3-209ENST00000488964 CCER1Q8TC90 406 aaPredicted RBP21.42■■□□□ 1.02
CYTH3-209ENST00000488964 CARD11Q9BXL7 1154 aa21.42■■□□□ 1.02
CYTH3-209ENST00000488964 TIMELESSQ9UNS1 1208 aa21.42■■□□□ 1.02
CYTH3-209ENST00000488964 QRICH2Q9H0J4 1663 aa21.41■■□□□ 1.02
CYTH3-209ENST00000488964 PXDNQ92626 1479 aa21.41■■□□□ 1.02
CYTH3-209ENST00000488964 GPRASP1Q5JY77 1395 aa21.41■■□□□ 1.02
CYTH3-209ENST00000488964 NUTM2BA6NNL0 878 aaPredicted RBP21.41■■□□□ 1.02
CYTH3-209ENST00000488964 NUTM2EB1AL46 878 aaPredicted RBP21.41■■□□□ 1.02
CYTH3-209ENST00000488964 NUTM2AQ8IVF1 878 aaPredicted RBP21.41■■□□□ 1.02
CYTH3-209ENST00000488964 CDK19Q9BWU1 502 aa21.4■■□□□ 1.02
CYTH3-209ENST00000488964 XPCQ01831 940 aaPredicted RBP21.39■■□□□ 1.01
CYTH3-209ENST00000488964 NBPF8Q3BBV2 869 aa21.39■■□□□ 1.01
CYTH3-209ENST00000488964 KRT28Q7Z3Y7 464 aa21.39■■□□□ 1.01
CYTH3-209ENST00000488964 USP32Q8NFA0 1604 aa21.38■■□□□ 1.01
CYTH3-209ENST00000488964 SRPK2P78362 688 aaKnown RBP21.38■■□□□ 1.01
CYTH3-209ENST00000488964 NGDNQ8NEJ9 315 aaKnown RBP21.38■■□□□ 1.01
CYTH3-209ENST00000488964 EVC2Q86UK5 1308 aa21.37■■□□□ 1.01
CYTH3-209ENST00000488964 PMFBP1Q8TBY8 1022 aa21.37■■□□□ 1.01
CYTH3-209ENST00000488964 NUDT16Q96DE0 195 aaKnown RBP21.37■■□□□ 1.01
CYTH3-209ENST00000488964 SBNO1A3KN83 1393 aa21.36■■□□□ 1.01
CYTH3-209ENST00000488964 ATP7BP35670 1465 aa21.35■■□□□ 1.01
CYTH3-209ENST00000488964 CCDC61Q9Y6R9 512 aa21.35■■□□□ 1.01
CYTH3-209ENST00000488964 LRP6O75581 1613 aa21.35■■□□□ 1.01
CYTH3-209ENST00000488964 ARHGEF10O15013 1369 aa21.35■■□□□ 1.01
CYTH3-209ENST00000488964 PRR36Q9H6K5 1346 aa21.34■■□□□ 1.01
CYTH3-209ENST00000488964 COL22A1Q8NFW1 1626 aaPredicted RBP21.34■■□□□ 1.01
CYTH3-209ENST00000488964 ZNF772Q68DY9 489 aaPredicted RBP21.34■■□□□ 1.01
CYTH3-209ENST00000488964 TNS3Q68CZ2 1445 aa21.34■■□□□ 1.01
CYTH3-209ENST00000488964 SPATA31A3Q5VYP0 1347 aa21.33■■□□□ 1.01
CYTH3-209ENST00000488964 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1.01
CYTH3-209ENST00000488964 SLC24A1O60721 1099 aa21.32■■□□□ 1
CYTH3-209ENST00000488964 LMOD2Q6P5Q4 547 aa21.32■■□□□ 1
CYTH3-209ENST00000488964 SBNO2Q9Y2G9 1366 aa21.3■■□□□ 1
CYTH3-209ENST00000488964 TOPAZ1Q8N9V7 1692 aa21.29■■□□□ 1
CYTH3-209ENST00000488964 ADAMTS2O95450 1211 aa21.29■■□□□ 1
CYTH3-209ENST00000488964 C8orf37Q96NL8 207 aa21.29■■□□□ 1
CYTH3-209ENST00000488964 PAK3O75914 559 aaPredicted RBP21.28■■□□□ 1
CYTH3-209ENST00000488964 ILDR2Q71H61 639 aa21.28■■□□□ 1
CYTH3-209ENST00000488964 CABP2Q9NPB3 220 aa21.28■■□□□ 1
CYTH3-209ENST00000488964 ATAD2Q6PL18 1390 aa21.27■■□□□ 1
CYTH3-209ENST00000488964 NGLY1Q96IV0 654 aa21.27■■□□□ 1
CYTH3-209ENST00000488964 PPIP5K1Q6PFW1 1433 aa21.27■■□□□ 1
CYTH3-209ENST00000488964 PLEKHG3A1L390 1219 aa21.26■□□□□ 0.99
CYTH3-209ENST00000488964 POLR3AO14802 1390 aaPredicted RBP21.25■□□□□ 0.99
CYTH3-209ENST00000488964 RGS17Q9UGC6 210 aaPredicted RBP21.25■□□□□ 0.99
CYTH3-209ENST00000488964 ACEP12821 1306 aa21.25■□□□□ 0.99
CYTH3-209ENST00000488964 AFF2P51816 1311 aa21.25■□□□□ 0.99
CYTH3-209ENST00000488964 TRPM3Q9HCF6 1732 aaPredicted RBP21.23■□□□□ 0.99
CYTH3-209ENST00000488964 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
CYTH3-209ENST00000488964 MARF1Q9Y4F3 1742 aaKnown RBP21.21■□□□□ 0.99
CYTH3-209ENST00000488964 POTEAQ6S8J7 498 aa21.2■□□□□ 0.98
CYTH3-209ENST00000488964 ALS2Q96Q42 1657 aa21.19■□□□□ 0.98
CYTH3-209ENST00000488964 CABP1Q9NZU7 370 aa21.19■□□□□ 0.98
CYTH3-209ENST00000488964 USP47Q96K76 1375 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms