RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 REPIN1Q9BWE0 567 aaKnown RBP7.33□□□□□ -1.24
PRPF4-203ENST00000488937 GTPBP6O43824 516 aaPredicted RBP7.32□□□□□ -1.24
PRPF4-203ENST00000488937 PDIA6Q15084 440 aa7.31□□□□□ -1.24
PRPF4-203ENST00000488937 PADI6Q6TGC4 694 aa7.31□□□□□ -1.24
PRPF4-203ENST00000488937 CDHR5Q9HBB8 845 aa7.31□□□□□ -1.24
PRPF4-203ENST00000488937 MSTNO14793 375 aa7.3□□□□□ -1.24
PRPF4-203ENST00000488937 DNAJB2P25686 324 aa7.28□□□□□ -1.24
PRPF4-203ENST00000488937 TRIM32Q13049 653 aa7.27□□□□□ -1.25
PRPF4-203ENST00000488937 SPDYE16A6NNV3 312 aaPredicted RBP7.26□□□□□ -1.25
PRPF4-203ENST00000488937 CAPN5O15484 640 aaPredicted RBP7.26□□□□□ -1.25
PRPF4-203ENST00000488937 ZFP42Q96MM3 310 aa7.26□□□□□ -1.25
PRPF4-203ENST00000488937 TMEM134Q9H6X4 195 aa7.26□□□□□ -1.25
PRPF4-203ENST00000488937 SPOCK3Q9BQ16 436 aa7.24□□□□□ -1.25
PRPF4-203ENST00000488937 SLC10A3P09131 477 aa7.23□□□□□ -1.25
PRPF4-203ENST00000488937 NPDC1Q9NQX5 325 aaPredicted RBP7.23□□□□□ -1.25
PRPF4-203ENST00000488937 K7ELQ4 463 aaPredicted RBP7.22□□□□□ -1.25
PRPF4-203ENST00000488937 PUS10Q3MIT2 529 aaKnown RBP7.22□□□□□ -1.25
PRPF4-203ENST00000488937 FAM160A2Q8N612 972 aaPredicted RBP7.22□□□□□ -1.25
PRPF4-203ENST00000488937 THAP11Q96EK4 314 aa7.22□□□□□ -1.25
PRPF4-203ENST00000488937 ZNF385CQ66K41 422 aaPredicted RBP7.21□□□□□ -1.26
PRPF4-203ENST00000488937 SCARF2Q96GP6 870 aaPredicted RBP7.21□□□□□ -1.26
PRPF4-203ENST00000488937 ALDH1A1P00352 501 aa7.2□□□□□ -1.26
PRPF4-203ENST00000488937 KRT76Q01546 638 aa7.2□□□□□ -1.26
PRPF4-203ENST00000488937 PLA2G4EQ3MJ16 856 aa7.2□□□□□ -1.26
PRPF4-203ENST00000488937 GRXCR2A6NFK2 248 aa7.19□□□□□ -1.26
PRPF4-203ENST00000488937 OSBPP22059 807 aa7.19□□□□□ -1.26
PRPF4-203ENST00000488937 RC3H1Q5TC82 1133 aaKnown RBP7.19□□□□□ -1.26
PRPF4-203ENST00000488937 CADPS2Q86UW7 1296 aa7.19□□□□□ -1.26
PRPF4-203ENST00000488937 SVOPQ8N4V2 548 aa7.19□□□□□ -1.26
PRPF4-203ENST00000488937 ARHGEF15O94989 841 aa7.18□□□□□ -1.26
PRPF4-203ENST00000488937 MARSP56192 900 aaKnown RBP7.18□□□□□ -1.26
PRPF4-203ENST00000488937 CNTNAP3BQ96NU0 1288 aa7.17□□□□□ -1.26
PRPF4-203ENST00000488937 CNTNAP3Q9BZ76 1288 aa7.17□□□□□ -1.26
PRPF4-203ENST00000488937 PRDM9Q9NQV7 894 aa7.17□□□□□ -1.26
PRPF4-203ENST00000488937 PPFIA3O75145 1194 aa7.16□□□□□ -1.26
PRPF4-203ENST00000488937 FMNL1O95466 1100 aaPredicted RBP7.16□□□□□ -1.26
PRPF4-203ENST00000488937 PROCP04070 461 aa7.16□□□□□ -1.26
PRPF4-203ENST00000488937 RBM46Q8TBY0 533 aaKnown RBP7.16□□□□□ -1.26
PRPF4-203ENST00000488937 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
PRPF4-203ENST00000488937 ITGB2P05107 769 aa7.14□□□□□ -1.27
PRPF4-203ENST00000488937 WNT7BP56706 349 aa7.14□□□□□ -1.27
PRPF4-203ENST00000488937 GALNT6Q8NCL4 622 aa7.14□□□□□ -1.27
PRPF4-203ENST00000488937 SALL2Q9Y467 1007 aaPredicted RBP7.14□□□□□ -1.27
PRPF4-203ENST00000488937 SOBPA7XYQ1 873 aa7.13□□□□□ -1.27
PRPF4-203ENST00000488937 DCAF8L2P0C7V8 631 aa7.13□□□□□ -1.27
PRPF4-203ENST00000488937 SCARF1Q14162 830 aa7.13□□□□□ -1.27
PRPF4-203ENST00000488937 MSS51Q4VC12 460 aa7.13□□□□□ -1.27
PRPF4-203ENST00000488937 MORN1Q5T089 497 aa7.13□□□□□ -1.27
PRPF4-203ENST00000488937 RCCD1A6NED2 376 aa7.12□□□□□ -1.27
PRPF4-203ENST00000488937 SKOR1P84550 965 aa7.11□□□□□ -1.27
PRPF4-203ENST00000488937 MRPL14Q6P1L8 145 aaKnown RBP7.11□□□□□ -1.27
PRPF4-203ENST00000488937 WASF2Q9Y6W5 498 aa7.11□□□□□ -1.27
PRPF4-203ENST00000488937 RSPH4AQ5TD94 716 aa7.1□□□□□ -1.27
PRPF4-203ENST00000488937 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
PRPF4-203ENST00000488937 GPR161Q8N6U8 529 aaKnown RBP7.1□□□□□ -1.27
PRPF4-203ENST00000488937 DCAF5Q96JK2 942 aa7.1□□□□□ -1.27
PRPF4-203ENST00000488937 SIAH2O43255 324 aa7.09□□□□□ -1.27
PRPF4-203ENST00000488937 SLURP2P0DP57 97 aa7.09□□□□□ -1.27
PRPF4-203ENST00000488937 BRICD5Q6PL45 260 aa7.09□□□□□ -1.27
PRPF4-203ENST00000488937 WHAMMQ8TF30 809 aa7.09□□□□□ -1.27
PRPF4-203ENST00000488937 ARIH1Q9Y4X5 557 aaPredicted RBP7.09□□□□□ -1.27
PRPF4-203ENST00000488937 FECHP22830 423 aa7.08□□□□□ -1.28
PRPF4-203ENST00000488937 PURBQ96QR8 312 aaKnown RBP7.08□□□□□ -1.28
PRPF4-203ENST00000488937 COL25A1Q9BXS0 654 aaPredicted RBP7.07□□□□□ -1.28
PRPF4-203ENST00000488937 SLC27A5Q9Y2P5 690 aa7.07□□□□□ -1.28
PRPF4-203ENST00000488937 ADGRG1Q9Y653 693 aa7.07□□□□□ -1.28
PRPF4-203ENST00000488937 MAN1A2O60476 641 aa7.06□□□□□ -1.28
PRPF4-203ENST00000488937 MMP16P51512 607 aa7.06□□□□□ -1.28
PRPF4-203ENST00000488937 E2F4Q16254 413 aa7.06□□□□□ -1.28
PRPF4-203ENST00000488937 ATP6V1AP38606 617 aa7.04□□□□□ -1.28
PRPF4-203ENST00000488937 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.03□□□□□ -1.28
PRPF4-203ENST00000488937 WDR70Q9NW82 654 aa7.03□□□□□ -1.28
PRPF4-203ENST00000488937 BAG6P46379 1132 aa7.02□□□□□ -1.29
PRPF4-203ENST00000488937 PHF20L1A8MW92 1017 aa7.01□□□□□ -1.29
PRPF4-203ENST00000488937 FUT2Q10981 343 aa7.01□□□□□ -1.29
PRPF4-203ENST00000488937 RNFT1Q5M7Z0 435 aa7.01□□□□□ -1.29
PRPF4-203ENST00000488937 LCE1DQ5T752 114 aa7.01□□□□□ -1.29
PRPF4-203ENST00000488937 GOLGA2P5Q9HBQ8 144 aa7.01□□□□□ -1.29
PRPF4-203ENST00000488937 EHBP1Q8NDI1 1231 aa7□□□□□ -1.29
PRPF4-203ENST00000488937 NANOS1Q8WY41 292 aaKnown RBP7□□□□□ -1.29
PRPF4-203ENST00000488937 BBXQ8WY36 941 aaPredicted RBP6.99□□□□□ -1.29
PRPF4-203ENST00000488937 FURINP09958 794 aa6.98□□□□□ -1.29
PRPF4-203ENST00000488937 RNF19BQ6ZMZ0 732 aa6.98□□□□□ -1.29
PRPF4-203ENST00000488937 DXOO77932 396 aaKnown RBP6.97□□□□□ -1.29
PRPF4-203ENST00000488937 PLCB2Q00722 1185 aa6.97□□□□□ -1.29
PRPF4-203ENST00000488937 TIMP2P16035 220 aa6.95□□□□□ -1.3
PRPF4-203ENST00000488937 MAP3K10Q02779 954 aa6.95□□□□□ -1.3
PRPF4-203ENST00000488937 CCDC24Q8N4L8 307 aa6.95□□□□□ -1.3
PRPF4-203ENST00000488937 BEND7Q8N7W2 519 aaPredicted RBP6.94□□□□□ -1.3
PRPF4-203ENST00000488937 ENAMQ9NRM1 1142 aa6.94□□□□□ -1.3
PRPF4-203ENST00000488937 ADH1CP00326 375 aa6.93□□□□□ -1.3
PRPF4-203ENST00000488937 PRKCSHP14314 528 aaPredicted RBP6.93□□□□□ -1.3
PRPF4-203ENST00000488937 PTGDRQ13258 359 aa6.93□□□□□ -1.3
PRPF4-203ENST00000488937 FAM161AQ3B820 660 aa6.93□□□□□ -1.3
PRPF4-203ENST00000488937 LYPD4Q6UWN0 246 aa6.93□□□□□ -1.3
PRPF4-203ENST00000488937 NNTQ13423 1086 aa6.92□□□□□ -1.3
PRPF4-203ENST00000488937 SPRYD3Q8NCJ5 442 aa6.92□□□□□ -1.3
PRPF4-203ENST00000488937 BCANQ96GW7 911 aa6.92□□□□□ -1.3
PRPF4-203ENST00000488937 CNTNAP5Q8WYK1 1306 aa6.92□□□□□ -1.3
PRPF4-203ENST00000488937 WDR4P57081 412 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms