RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 ROBO2Q9HCK4 1378 aa15.02■□□□□ -0
COL21A1-211ENST00000488912 PANK3Q9H999 370 aa15.02■□□□□ -0
COL21A1-211ENST00000488912 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
COL21A1-211ENST00000488912 PRKRIP1Q9H875 184 aaPredicted RBP15□□□□□ -0.01
COL21A1-211ENST00000488912 SIRT1Q96EB6 747 aa15□□□□□ -0.01
COL21A1-211ENST00000488912 CHD2O14647 1828 aaKnown RBP15□□□□□ -0.01
COL21A1-211ENST00000488912 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
COL21A1-211ENST00000488912 CABP2Q9NPB3 220 aa14.99□□□□□ -0.01
COL21A1-211ENST00000488912 AMOTL2Q9Y2J4 779 aa14.99□□□□□ -0.01
COL21A1-211ENST00000488912 NCKAP5LQ9HCH0 1330 aa14.99□□□□□ -0.01
COL21A1-211ENST00000488912 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.99□□□□□ -0.01
COL21A1-211ENST00000488912 PTCH1Q13635 1447 aa14.98□□□□□ -0.01
COL21A1-211ENST00000488912 CNGB1Q14028 1251 aaPredicted RBP14.98□□□□□ -0.01
COL21A1-211ENST00000488912 PIK3R4Q99570 1358 aa14.98□□□□□ -0.01
COL21A1-211ENST00000488912 SRPK2P78362 688 aaKnown RBP14.98□□□□□ -0.01
COL21A1-211ENST00000488912 PUS7Q96PZ0 661 aaKnown RBP14.98□□□□□ -0.01
COL21A1-211ENST00000488912 LMTK3Q96Q04 1460 aa14.97□□□□□ -0.01
COL21A1-211ENST00000488912 ADGRB2O60241 1585 aa14.96□□□□□ -0.01
COL21A1-211ENST00000488912 CCER2I3L3R5 266 aa14.96□□□□□ -0.01
COL21A1-211ENST00000488912 CDK19Q9BWU1 502 aa14.96□□□□□ -0.01
COL21A1-211ENST00000488912 HSPA2P54652 639 aa14.95□□□□□ -0.02
COL21A1-211ENST00000488912 TMC1Q8TDI8 760 aa14.95□□□□□ -0.02
COL21A1-211ENST00000488912 SLC12A5Q9H2X9 1139 aa14.95□□□□□ -0.02
COL21A1-211ENST00000488912 ATAD2Q6PL18 1390 aa14.94□□□□□ -0.02
COL21A1-211ENST00000488912 KCNA6P17658 529 aa14.94□□□□□ -0.02
COL21A1-211ENST00000488912 WASLO00401 505 aaPredicted RBP14.93□□□□□ -0.02
COL21A1-211ENST00000488912 KNSTRNQ9Y448 316 aa14.93□□□□□ -0.02
COL21A1-211ENST00000488912 KTN1Q86UP2 1357 aaKnown RBP14.92□□□□□ -0.02
COL21A1-211ENST00000488912 CARD14Q9BXL6 1004 aa14.92□□□□□ -0.02
COL21A1-211ENST00000488912 NINLQ9Y2I6 1382 aa14.92□□□□□ -0.02
COL21A1-211ENST00000488912 GTF3C3Q9Y5Q9 886 aa14.92□□□□□ -0.02
COL21A1-211ENST00000488912 CC2D1BQ5T0F9 858 aaKnown RBP14.91□□□□□ -0.02
COL21A1-211ENST00000488912 STRCQ7RTU9 1775 aa14.91□□□□□ -0.02
COL21A1-211ENST00000488912 PARD3Q8TEW0 1356 aa14.91□□□□□ -0.02
COL21A1-211ENST00000488912 NWD1Q149M9 1564 aa14.91□□□□□ -0.02
COL21A1-211ENST00000488912 AMER1Q5JTC6 1135 aaPredicted RBP14.91□□□□□ -0.02
COL21A1-211ENST00000488912 ANKRD36BQ8N2N9 1353 aa14.9□□□□□ -0.02
COL21A1-211ENST00000488912 YTHDC1Q96MU7 727 aaKnown RBP14.9□□□□□ -0.02
COL21A1-211ENST00000488912 NSD3Q9BZ95 1437 aa14.9□□□□□ -0.02
COL21A1-211ENST00000488912 CCDC184Q52MB2 194 aa14.89□□□□□ -0.03
COL21A1-211ENST00000488912 CD163L1Q9NR16 1453 aa14.89□□□□□ -0.03
COL21A1-211ENST00000488912 NALCNQ8IZF0 1738 aa14.89□□□□□ -0.03
COL21A1-211ENST00000488912 ATP7BP35670 1465 aa14.89□□□□□ -0.03
COL21A1-211ENST00000488912 RALBP1Q15311 655 aa14.89□□□□□ -0.03
COL21A1-211ENST00000488912 USP32Q8NFA0 1604 aa14.89□□□□□ -0.03
COL21A1-211ENST00000488912 A0A1W2PP64 1363 aa14.88□□□□□ -0.03
COL21A1-211ENST00000488912 TOPAZ1Q8N9V7 1692 aa14.88□□□□□ -0.03
COL21A1-211ENST00000488912 NPC1L1Q9UHC9 1359 aa14.87□□□□□ -0.03
COL21A1-211ENST00000488912 CABP1Q9NZU7 370 aa14.87□□□□□ -0.03
COL21A1-211ENST00000488912 PPIP5K1Q6PFW1 1433 aa14.87□□□□□ -0.03
COL21A1-211ENST00000488912 PRR36Q9H6K5 1346 aa14.87□□□□□ -0.03
COL21A1-211ENST00000488912 NUDT16Q96DE0 195 aaKnown RBP14.86□□□□□ -0.03
COL21A1-211ENST00000488912 MYBBP1AQ9BQG0 1328 aaKnown RBP14.86□□□□□ -0.03
COL21A1-211ENST00000488912 STRCP1A6NGW2 1772 aa14.86□□□□□ -0.03
COL21A1-211ENST00000488912 RGPD8O14715 1765 aaPredicted RBP14.86□□□□□ -0.03
COL21A1-211ENST00000488912 MRS2Q9HD23 443 aa14.85□□□□□ -0.03
COL21A1-211ENST00000488912 ITSN1Q15811 1721 aa14.85□□□□□ -0.03
COL21A1-211ENST00000488912 CENPBP07199 599 aaPredicted RBP14.84□□□□□ -0.03
COL21A1-211ENST00000488912 RBM33Q96EV2 1170 aaKnown RBP14.84□□□□□ -0.03
COL21A1-211ENST00000488912 TERF2IPQ9NYB0 399 aa14.84□□□□□ -0.03
COL21A1-211ENST00000488912 FMN2Q9NZ56 1722 aa14.84□□□□□ -0.03
COL21A1-211ENST00000488912 CDC42BPGQ6DT37 1551 aa14.84□□□□□ -0.03
COL21A1-211ENST00000488912 CCDC61Q9Y6R9 512 aa14.84□□□□□ -0.03
COL21A1-211ENST00000488912 AKAP12Q02952 1782 aa14.83□□□□□ -0.03
COL21A1-211ENST00000488912 NUTM2FA1L443 756 aa14.83□□□□□ -0.03
COL21A1-211ENST00000488912 NKTRP30414 1462 aaKnown RBP14.83□□□□□ -0.04
COL21A1-211ENST00000488912 MON2Q7Z3U7 1717 aa14.83□□□□□ -0.04
COL21A1-211ENST00000488912 HDGFL2Q7Z4V5 671 aaPredicted RBP14.82□□□□□ -0.04
COL21A1-211ENST00000488912 ADGRL3Q9HAR2 1447 aa14.82□□□□□ -0.04
COL21A1-211ENST00000488912 CPSF1Q10570 1443 aaKnown RBP14.82□□□□□ -0.04
COL21A1-211ENST00000488912 CGNL1Q0VF96 1302 aa14.82□□□□□ -0.04
COL21A1-211ENST00000488912 KIF20BQ96Q89 1820 aa14.82□□□□□ -0.04
COL21A1-211ENST00000488912 BRD4O60885 1362 aaPredicted RBP14.81□□□□□ -0.04
COL21A1-211ENST00000488912 NLRP13Q86W25 1043 aa14.81□□□□□ -0.04
COL21A1-211ENST00000488912 ANKRD26Q9UPS8 1709 aa14.8□□□□□ -0.04
COL21A1-211ENST00000488912 ANKARQ7Z5J8 1434 aa14.78□□□□□ -0.04
COL21A1-211ENST00000488912 NSD2O96028 1365 aa14.78□□□□□ -0.04
COL21A1-211ENST00000488912 PPP2R1AP30153 589 aa14.78□□□□□ -0.04
COL21A1-211ENST00000488912 PROSER2Q86WR7 435 aaPredicted RBP14.78□□□□□ -0.04
COL21A1-211ENST00000488912 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.04
COL21A1-211ENST00000488912 EDC4Q6P2E9 1401 aaKnown RBP14.77□□□□□ -0.05
COL21A1-211ENST00000488912 C14orf37Q86TY3 774 aa14.77□□□□□ -0.05
COL21A1-211ENST00000488912 PLEKHG3A1L390 1219 aa14.76□□□□□ -0.05
COL21A1-211ENST00000488912 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
COL21A1-211ENST00000488912 MORC1Q86VD1 984 aa14.76□□□□□ -0.05
COL21A1-211ENST00000488912 ACEP12821 1306 aa14.75□□□□□ -0.05
COL21A1-211ENST00000488912 FYB1O15117 783 aa14.75□□□□□ -0.05
COL21A1-211ENST00000488912 XIRP1Q702N8 1843 aaKnown RBP14.75□□□□□ -0.05
COL21A1-211ENST00000488912 TMEM94Q12767 1356 aa14.75□□□□□ -0.05
COL21A1-211ENST00000488912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL21A1-211ENST00000488912 GGNBP2Q9H3C7 697 aa14.75□□□□□ -0.05
COL21A1-211ENST00000488912 PMFBP1Q8TBY8 1022 aa14.74□□□□□ -0.05
COL21A1-211ENST00000488912 PNISRQ8TF01 805 aaKnown RBP14.74□□□□□ -0.05
COL21A1-211ENST00000488912 TNNT2P45379 298 aaPredicted RBP14.74□□□□□ -0.05
COL21A1-211ENST00000488912 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
COL21A1-211ENST00000488912 USP6P35125 1406 aa14.73□□□□□ -0.05
COL21A1-211ENST00000488912 POLR3AO14802 1390 aaPredicted RBP14.73□□□□□ -0.05
COL21A1-211ENST00000488912 ZNF335Q9H4Z2 1342 aaPredicted RBP14.72□□□□□ -0.05
COL21A1-211ENST00000488912 NME9Q86XW9 330 aa14.71□□□□□ -0.05
COL21A1-211ENST00000488912 C19orf44Q9H6X5 657 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms