RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
TRAIP-209ENST00000488860 LRRC7Q96NW7 1537 aa17.31■□□□□ 0.36
TRAIP-209ENST00000488860 MINK1Q8N4C8 1332 aaPredicted RBP17.3■□□□□ 0.36
TRAIP-209ENST00000488860 C14orf37Q86TY3 774 aa17.3■□□□□ 0.36
TRAIP-209ENST00000488860 TULP4Q9NRJ4 1543 aa17.29■□□□□ 0.36
TRAIP-209ENST00000488860 TMEM94Q12767 1356 aa17.28■□□□□ 0.36
TRAIP-209ENST00000488860 FMN2Q9NZ56 1722 aa17.28■□□□□ 0.36
TRAIP-209ENST00000488860 SIRT1Q96EB6 747 aa17.28■□□□□ 0.36
TRAIP-209ENST00000488860 ADGRL3Q9HAR2 1447 aa17.28■□□□□ 0.36
TRAIP-209ENST00000488860 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
TRAIP-209ENST00000488860 RGPD8O14715 1765 aaPredicted RBP17.27■□□□□ 0.35
TRAIP-209ENST00000488860 SBNO2Q9Y2G9 1366 aa17.26■□□□□ 0.35
TRAIP-209ENST00000488860 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
TRAIP-209ENST00000488860 DISP3Q9P2K9 1392 aa17.24■□□□□ 0.35
TRAIP-209ENST00000488860 TESK2Q96S53 571 aa17.23■□□□□ 0.35
TRAIP-209ENST00000488860 NCOA3Q9Y6Q9 1424 aa17.22■□□□□ 0.35
TRAIP-209ENST00000488860 TMF1P82094 1093 aa17.22■□□□□ 0.35
TRAIP-209ENST00000488860 MSH6P52701 1360 aa17.22■□□□□ 0.35
TRAIP-209ENST00000488860 EVC2Q86UK5 1308 aa17.21■□□□□ 0.35
TRAIP-209ENST00000488860 USP32Q8NFA0 1604 aa17.21■□□□□ 0.35
TRAIP-209ENST00000488860 MYOM1P52179 1685 aa17.21■□□□□ 0.35
TRAIP-209ENST00000488860 TOPAZ1Q8N9V7 1692 aa17.21■□□□□ 0.35
TRAIP-209ENST00000488860 POLR3GLQ9BT43 218 aa17.21■□□□□ 0.35
TRAIP-209ENST00000488860 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
TRAIP-209ENST00000488860 WASLO00401 505 aaPredicted RBP17.18■□□□□ 0.34
TRAIP-209ENST00000488860 CDK19Q9BWU1 502 aa17.18■□□□□ 0.34
TRAIP-209ENST00000488860 DCCP43146 1447 aa17.18■□□□□ 0.34
TRAIP-209ENST00000488860 NUTM2FA1L443 756 aa17.17■□□□□ 0.34
TRAIP-209ENST00000488860 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
TRAIP-209ENST00000488860 CABP2Q9NPB3 220 aa17.17■□□□□ 0.34
TRAIP-209ENST00000488860 ATP7BP35670 1465 aa17.17■□□□□ 0.34
TRAIP-209ENST00000488860 ATF3P18847 181 aa17.16■□□□□ 0.34
TRAIP-209ENST00000488860 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
TRAIP-209ENST00000488860 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
TRAIP-209ENST00000488860 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
TRAIP-209ENST00000488860 KIF7Q2M1P5 1343 aa17.15■□□□□ 0.34
TRAIP-209ENST00000488860 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
TRAIP-209ENST00000488860 CDCA8Q53HL2 280 aa17.14■□□□□ 0.33
TRAIP-209ENST00000488860 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
TRAIP-209ENST00000488860 MST1RQ04912 1400 aa17.13■□□□□ 0.33
TRAIP-209ENST00000488860 ANKARQ7Z5J8 1434 aa17.13■□□□□ 0.33
TRAIP-209ENST00000488860 IQSEC2Q5JU85 1478 aa17.13■□□□□ 0.33
TRAIP-209ENST00000488860 ATAD2Q6PL18 1390 aa17.13■□□□□ 0.33
TRAIP-209ENST00000488860 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
TRAIP-209ENST00000488860 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
TRAIP-209ENST00000488860 WASHC2AQ641Q2 1341 aa17.12■□□□□ 0.33
TRAIP-209ENST00000488860 PPIP5K1Q6PFW1 1433 aa17.12■□□□□ 0.33
TRAIP-209ENST00000488860 PRR36Q9H6K5 1346 aa17.11■□□□□ 0.33
TRAIP-209ENST00000488860 C1orf167Q5SNV9 1468 aa17.11■□□□□ 0.33
TRAIP-209ENST00000488860 CERKQ8TCT0 537 aa17.1■□□□□ 0.33
TRAIP-209ENST00000488860 NUDT16Q96DE0 195 aaKnown RBP17.1■□□□□ 0.33
TRAIP-209ENST00000488860 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
TRAIP-209ENST00000488860 ROBO1Q9Y6N7 1651 aa17.09■□□□□ 0.33
TRAIP-209ENST00000488860 MON2Q7Z3U7 1717 aa17.09■□□□□ 0.33
TRAIP-209ENST00000488860 ESCO1Q5FWF5 840 aa17.06■□□□□ 0.32
TRAIP-209ENST00000488860 PUS7Q96PZ0 661 aaKnown RBP17.06■□□□□ 0.32
TRAIP-209ENST00000488860 NINLQ9Y2I6 1382 aa17.05■□□□□ 0.32
TRAIP-209ENST00000488860 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
TRAIP-209ENST00000488860 NHSL1Q5SYE7 1610 aa17.04■□□□□ 0.32
TRAIP-209ENST00000488860 NRKQ7Z2Y5 1582 aa17.04■□□□□ 0.32
TRAIP-209ENST00000488860 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
TRAIP-209ENST00000488860 CABP1Q9NZU7 370 aa17.04■□□□□ 0.32
TRAIP-209ENST00000488860 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
TRAIP-209ENST00000488860 UBAP1LF5GYI3 381 aa17.03■□□□□ 0.32
TRAIP-209ENST00000488860 ORAI2Q96SN7 254 aa17.03■□□□□ 0.32
TRAIP-209ENST00000488860 SLC12A5Q9H2X9 1139 aa17.03■□□□□ 0.32
TRAIP-209ENST00000488860 SLAIN2Q9P270 581 aa17.03■□□□□ 0.32
TRAIP-209ENST00000488860 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.32
TRAIP-209ENST00000488860 CD163L1Q9NR16 1453 aa17.02■□□□□ 0.32
TRAIP-209ENST00000488860 TOM1O60784 492 aa17.02■□□□□ 0.32
TRAIP-209ENST00000488860 PHF8Q9UPP1 1060 aa17.02■□□□□ 0.32
TRAIP-209ENST00000488860 PHLPP1O60346 1717 aa17.01■□□□□ 0.31
TRAIP-209ENST00000488860 A0A1W2PP64 1363 aa17.01■□□□□ 0.31
TRAIP-209ENST00000488860 ANKRD36BQ8N2N9 1353 aa17.01■□□□□ 0.31
TRAIP-209ENST00000488860 PIP4K2BP78356 416 aa17■□□□□ 0.31
TRAIP-209ENST00000488860 HDGFL2Q7Z4V5 671 aaPredicted RBP17■□□□□ 0.31
TRAIP-209ENST00000488860 NGDNQ8NEJ9 315 aaKnown RBP17■□□□□ 0.31
TRAIP-209ENST00000488860 TRPM3Q9HCF6 1732 aaPredicted RBP17■□□□□ 0.31
TRAIP-209ENST00000488860 ACEP12821 1306 aa16.99■□□□□ 0.31
TRAIP-209ENST00000488860 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
TRAIP-209ENST00000488860 BRINP3Q76B58 766 aa16.99■□□□□ 0.31
TRAIP-209ENST00000488860 PLEKHG3A1L390 1219 aa16.98■□□□□ 0.31
TRAIP-209ENST00000488860 TERF2IPQ9NYB0 399 aa16.98■□□□□ 0.31
TRAIP-209ENST00000488860 POLR3AO14802 1390 aaPredicted RBP16.98■□□□□ 0.31
TRAIP-209ENST00000488860 KTN1Q86UP2 1357 aaKnown RBP16.98■□□□□ 0.31
TRAIP-209ENST00000488860 NSD3Q9BZ95 1437 aa16.97■□□□□ 0.31
TRAIP-209ENST00000488860 ANKRD26Q9UPS8 1709 aa16.97■□□□□ 0.31
TRAIP-209ENST00000488860 PANK3Q9H999 370 aa16.97■□□□□ 0.31
TRAIP-209ENST00000488860 USP6P35125 1406 aa16.96■□□□□ 0.31
TRAIP-209ENST00000488860 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.31
TRAIP-209ENST00000488860 AHDC1Q5TGY3 1603 aaPredicted RBP16.96■□□□□ 0.31
TRAIP-209ENST00000488860 XPCQ01831 940 aaPredicted RBP16.96■□□□□ 0.31
TRAIP-209ENST00000488860 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
TRAIP-209ENST00000488860 FOXO3O43524 673 aa16.95■□□□□ 0.3
TRAIP-209ENST00000488860 NPHP3Q7Z494 1330 aa16.95■□□□□ 0.3
TRAIP-209ENST00000488860 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
TRAIP-209ENST00000488860 PXDNQ92626 1479 aa16.94■□□□□ 0.3
TRAIP-209ENST00000488860 PSME1Q06323 249 aa16.94■□□□□ 0.3
TRAIP-209ENST00000488860 EDC4Q6P2E9 1401 aaKnown RBP16.94■□□□□ 0.3
TRAIP-209ENST00000488860 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms