RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 ROBO2Q9HCK4 1378 aa14.1□□□□□ -0.15
PDPN-206ENST00000488631 NCOA3Q9Y6Q9 1424 aa14.1□□□□□ -0.15
PDPN-206ENST00000488631 MYOM2P54296 1465 aa14.1□□□□□ -0.15
PDPN-206ENST00000488631 CHD2O14647 1828 aaKnown RBP14.1□□□□□ -0.15
PDPN-206ENST00000488631 LRPPRCP42704 1394 aaKnown RBP14.09□□□□□ -0.15
PDPN-206ENST00000488631 TONSLQ96HA7 1378 aa14.09□□□□□ -0.15
PDPN-206ENST00000488631 NUTM2FA1L443 756 aa14.09□□□□□ -0.15
PDPN-206ENST00000488631 CCER1Q8TC90 406 aaPredicted RBP14.09□□□□□ -0.15
PDPN-206ENST00000488631 YTHDC2Q9H6S0 1430 aaKnown RBP14.08□□□□□ -0.15
PDPN-206ENST00000488631 PRAM1Q96QH2 718 aa14.08□□□□□ -0.16
PDPN-206ENST00000488631 ABCC11Q96J66 1382 aa14.06□□□□□ -0.16
PDPN-206ENST00000488631 PTCH1Q13635 1447 aa14.06□□□□□ -0.16
PDPN-206ENST00000488631 ZBTB22O15209 634 aa14.05□□□□□ -0.16
PDPN-206ENST00000488631 ADGRL3Q9HAR2 1447 aa14.05□□□□□ -0.16
PDPN-206ENST00000488631 ABCB7O75027 752 aa14.04□□□□□ -0.16
PDPN-206ENST00000488631 ESCO1Q5FWF5 840 aa14.04□□□□□ -0.16
PDPN-206ENST00000488631 FAM135BQ49AJ0 1406 aa14.04□□□□□ -0.16
PDPN-206ENST00000488631 XRN1Q8IZH2 1706 aaKnown RBP14.04□□□□□ -0.16
PDPN-206ENST00000488631 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
PDPN-206ENST00000488631 MINK1Q8N4C8 1332 aaPredicted RBP14.03□□□□□ -0.16
PDPN-206ENST00000488631 PLEKHH1Q9ULM0 1364 aa14.03□□□□□ -0.16
PDPN-206ENST00000488631 NRXN1Q9ULB1 1477 aa14.03□□□□□ -0.16
PDPN-206ENST00000488631 IFT172Q9UG01 1749 aa14.03□□□□□ -0.16
PDPN-206ENST00000488631 BRINP3Q76B58 766 aa14.02□□□□□ -0.17
PDPN-206ENST00000488631 NBPF1Q3BBV0 1214 aa14.01□□□□□ -0.17
PDPN-206ENST00000488631 SIRT1Q96EB6 747 aa14.01□□□□□ -0.17
PDPN-206ENST00000488631 XIRP1Q702N8 1843 aaKnown RBP14.01□□□□□ -0.17
PDPN-206ENST00000488631 DCCP43146 1447 aa14□□□□□ -0.17
PDPN-206ENST00000488631 ORAI2Q96SN7 254 aa14□□□□□ -0.17
PDPN-206ENST00000488631 LAMC1P11047 1609 aa14□□□□□ -0.17
PDPN-206ENST00000488631 PRAG1Q86YV5 1406 aa13.99□□□□□ -0.17
PDPN-206ENST00000488631 ROCK2O75116 1388 aaKnown RBP13.99□□□□□ -0.17
PDPN-206ENST00000488631 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.99□□□□□ -0.17
PDPN-206ENST00000488631 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
PDPN-206ENST00000488631 ASXL1Q8IXJ9 1541 aa13.99□□□□□ -0.17
PDPN-206ENST00000488631 TECPR2O15040 1411 aa13.98□□□□□ -0.17
PDPN-206ENST00000488631 MEX3CQ5U5Q3 659 aaKnown RBP13.98□□□□□ -0.17
PDPN-206ENST00000488631 MST1RQ04912 1400 aa13.98□□□□□ -0.17
PDPN-206ENST00000488631 ROBO1Q9Y6N7 1651 aa13.98□□□□□ -0.17
PDPN-206ENST00000488631 NUTM2BA6NNL0 878 aaPredicted RBP13.97□□□□□ -0.17
PDPN-206ENST00000488631 NUTM2EB1AL46 878 aaPredicted RBP13.97□□□□□ -0.17
PDPN-206ENST00000488631 NUTM2AQ8IVF1 878 aaPredicted RBP13.97□□□□□ -0.17
PDPN-206ENST00000488631 SETD1AO15047 1707 aaKnown RBP13.97□□□□□ -0.17
PDPN-206ENST00000488631 C1orf167Q5SNV9 1468 aa13.96□□□□□ -0.17
PDPN-206ENST00000488631 PLEKHG5O94827 1062 aa13.96□□□□□ -0.17
PDPN-206ENST00000488631 XPCQ01831 940 aaPredicted RBP13.96□□□□□ -0.17
PDPN-206ENST00000488631 CARD11Q9BXL7 1154 aa13.96□□□□□ -0.17
PDPN-206ENST00000488631 FOXO3O43524 673 aa13.95□□□□□ -0.18
PDPN-206ENST00000488631 LMOD2Q6P5Q4 547 aa13.95□□□□□ -0.18
PDPN-206ENST00000488631 LRRC59Q96AG4 307 aaKnown RBP13.95□□□□□ -0.18
PDPN-206ENST00000488631 CENPJQ9HC77 1338 aaPredicted RBP13.94□□□□□ -0.18
PDPN-206ENST00000488631 SRPK2P78362 688 aaKnown RBP13.94□□□□□ -0.18
PDPN-206ENST00000488631 PSME1Q06323 249 aa13.94□□□□□ -0.18
PDPN-206ENST00000488631 NALCNQ8IZF0 1738 aa13.93□□□□□ -0.18
PDPN-206ENST00000488631 ADGRB1O14514 1584 aa13.93□□□□□ -0.18
PDPN-206ENST00000488631 WASLO00401 505 aaPredicted RBP13.93□□□□□ -0.18
PDPN-206ENST00000488631 NBPF8Q3BBV2 869 aa13.93□□□□□ -0.18
PDPN-206ENST00000488631 PMFBP1Q8TBY8 1022 aa13.93□□□□□ -0.18
PDPN-206ENST00000488631 PHF8Q9UPP1 1060 aa13.93□□□□□ -0.18
PDPN-206ENST00000488631 JCADQ9P266 1359 aa13.93□□□□□ -0.18
PDPN-206ENST00000488631 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
PDPN-206ENST00000488631 NGDNQ8NEJ9 315 aaKnown RBP13.92□□□□□ -0.18
PDPN-206ENST00000488631 CDK19Q9BWU1 502 aa13.92□□□□□ -0.18
PDPN-206ENST00000488631 EIF3AQ14152 1382 aaKnown RBP13.92□□□□□ -0.18
PDPN-206ENST00000488631 DLC1Q96QB1 1528 aa13.91□□□□□ -0.18
PDPN-206ENST00000488631 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
PDPN-206ENST00000488631 MED1Q15648 1581 aaPredicted RBP13.91□□□□□ -0.18
PDPN-206ENST00000488631 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
PDPN-206ENST00000488631 PHLPP1O60346 1717 aa13.9□□□□□ -0.18
PDPN-206ENST00000488631 KNDC1Q76NI1 1749 aa13.9□□□□□ -0.18
PDPN-206ENST00000488631 CDC42BPGQ6DT37 1551 aa13.89□□□□□ -0.19
PDPN-206ENST00000488631 PAK3O75914 559 aaPredicted RBP13.89□□□□□ -0.19
PDPN-206ENST00000488631 KRT28Q7Z3Y7 464 aa13.89□□□□□ -0.19
PDPN-206ENST00000488631 NUDT16Q96DE0 195 aaKnown RBP13.89□□□□□ -0.19
PDPN-206ENST00000488631 CABP2Q9NPB3 220 aa13.88□□□□□ -0.19
PDPN-206ENST00000488631 GPRASP1Q5JY77 1395 aa13.87□□□□□ -0.19
PDPN-206ENST00000488631 ADAMTS2O95450 1211 aa13.87□□□□□ -0.19
PDPN-206ENST00000488631 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
PDPN-206ENST00000488631 SPATA31A6Q5VVP1 1343 aa13.87□□□□□ -0.19
PDPN-206ENST00000488631 EVC2Q86UK5 1308 aa13.87□□□□□ -0.19
PDPN-206ENST00000488631 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
PDPN-206ENST00000488631 KIAA1210Q9ULL0 1709 aa13.85□□□□□ -0.19
PDPN-206ENST00000488631 SOS2Q07890 1332 aaPredicted RBP13.85□□□□□ -0.19
PDPN-206ENST00000488631 ANKARQ7Z5J8 1434 aa13.84□□□□□ -0.19
PDPN-206ENST00000488631 AHDC1Q5TGY3 1603 aaPredicted RBP13.84□□□□□ -0.19
PDPN-206ENST00000488631 C8orf37Q96NL8 207 aa13.84□□□□□ -0.19
PDPN-206ENST00000488631 CCDC61Q9Y6R9 512 aa13.84□□□□□ -0.19
PDPN-206ENST00000488631 TMC1Q8TDI8 760 aa13.83□□□□□ -0.2
PDPN-206ENST00000488631 PRR36Q9H6K5 1346 aa13.83□□□□□ -0.2
PDPN-206ENST00000488631 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
PDPN-206ENST00000488631 COL16A1Q07092 1604 aaPredicted RBP13.81□□□□□ -0.2
PDPN-206ENST00000488631 TRPM1Q7Z4N2 1603 aa13.81□□□□□ -0.2
PDPN-206ENST00000488631 PNPLA6Q8IY17 1366 aa13.81□□□□□ -0.2
PDPN-206ENST00000488631 FMN2Q9NZ56 1722 aa13.81□□□□□ -0.2
PDPN-206ENST00000488631 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
PDPN-206ENST00000488631 TULP4Q9NRJ4 1543 aa13.8□□□□□ -0.2
PDPN-206ENST00000488631 POLA2Q14181 598 aa13.8□□□□□ -0.2
PDPN-206ENST00000488631 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
PDPN-206ENST00000488631 ARHGEF28Q8N1W1 1705 aaKnown RBP13.8□□□□□ -0.2
PDPN-206ENST00000488631 ST20-MTHFSA0A0A6YYL1 179 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms