RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 SALL2Q9Y467 1007 aaPredicted RBP8.15□□□□□ -1.1
CD46-215ENST00000488596 AXIN1O15169 862 aa8.14□□□□□ -1.11
CD46-215ENST00000488596 RPIAP49247 311 aa8.14□□□□□ -1.11
CD46-215ENST00000488596 GMPR2Q9P2T1 348 aaKnown RBP8.14□□□□□ -1.11
CD46-215ENST00000488596 CD46P15529 392 aa8.13□□□□□ -1.11
CD46-215ENST00000488596 MAP2K5Q13163 448 aa8.13□□□□□ -1.11
CD46-215ENST00000488596 TOR4AQ9NXH8 423 aa8.13□□□□□ -1.11
CD46-215ENST00000488596 DACH1Q9UI36 760 aa8.13□□□□□ -1.11
CD46-215ENST00000488596 IRF6O14896 467 aa8.12□□□□□ -1.11
CD46-215ENST00000488596 CD2BP2O95400 341 aaKnown RBP8.11□□□□□ -1.11
CD46-215ENST00000488596 GRIPAP1Q4V328 841 aa8.1□□□□□ -1.11
CD46-215ENST00000488596 MSS51Q4VC12 460 aa8.1□□□□□ -1.11
CD46-215ENST00000488596 CYP4X1Q8N118 509 aa8.1□□□□□ -1.11
CD46-215ENST00000488596 MDM2Q00987 491 aaPredicted RBP8.09□□□□□ -1.11
CD46-215ENST00000488596 VSIG10Q8N0Z9 540 aa8.09□□□□□ -1.11
CD46-215ENST00000488596 HLA-CQ95604 372 aa8.09□□□□□ -1.11
CD46-215ENST00000488596 KDM4AO75164 1064 aa8.08□□□□□ -1.12
CD46-215ENST00000488596 MINK1Q8N4C8 1332 aaPredicted RBP8.07□□□□□ -1.12
CD46-215ENST00000488596 FAM181BA6NEQ2 426 aa8.06□□□□□ -1.12
CD46-215ENST00000488596 TULP1O00294 542 aaPredicted RBP8.06□□□□□ -1.12
CD46-215ENST00000488596 MMP16P51512 607 aa8.06□□□□□ -1.12
CD46-215ENST00000488596 Q3C1V9 767 aa8.06□□□□□ -1.12
CD46-215ENST00000488596 CCDC102AQ96A19 550 aa8.06□□□□□ -1.12
CD46-215ENST00000488596 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
CD46-215ENST00000488596 TERTO14746 1132 aaKnown RBP8.05□□□□□ -1.12
CD46-215ENST00000488596 ZBTB24O43167 697 aaPredicted RBP8.05□□□□□ -1.12
CD46-215ENST00000488596 USB1Q9BQ65 265 aaKnown RBP8.05□□□□□ -1.12
CD46-215ENST00000488596 KRTAP4-6Q9BYQ5 205 aa8.05□□□□□ -1.12
CD46-215ENST00000488596 SENP2Q9HC62 589 aa8.04□□□□□ -1.12
CD46-215ENST00000488596 HOXA2O43364 376 aa8.03□□□□□ -1.12
CD46-215ENST00000488596 DXOO77932 396 aaKnown RBP8.03□□□□□ -1.12
CD46-215ENST00000488596 GUCA2AQ02747 115 aa8.03□□□□□ -1.12
CD46-215ENST00000488596 TRIM32Q13049 653 aa8.02□□□□□ -1.13
CD46-215ENST00000488596 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.02□□□□□ -1.13
CD46-215ENST00000488596 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
CD46-215ENST00000488596 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
CD46-215ENST00000488596 TTC24A2A3L6 582 aaPredicted RBP8.01□□□□□ -1.13
CD46-215ENST00000488596 USP46P62068 366 aa8.01□□□□□ -1.13
CD46-215ENST00000488596 LCE2CQ5TA81 110 aa8.01□□□□□ -1.13
CD46-215ENST00000488596 SYMPKQ92797 1274 aaKnown RBP8.01□□□□□ -1.13
CD46-215ENST00000488596 REPIN1Q9BWE0 567 aaKnown RBP8.01□□□□□ -1.13
CD46-215ENST00000488596 ATP13A2Q9NQ11 1180 aa8.01□□□□□ -1.13
CD46-215ENST00000488596 FAM217BQ9NTX9 383 aaPredicted RBP8.01□□□□□ -1.13
CD46-215ENST00000488596 WNT7AO00755 349 aa8□□□□□ -1.13
CD46-215ENST00000488596 SMPD1P17405 629 aa7.99□□□□□ -1.13
CD46-215ENST00000488596 CLCN1P35523 988 aa7.99□□□□□ -1.13
CD46-215ENST00000488596 CCDC24Q8N4L8 307 aa7.99□□□□□ -1.13
CD46-215ENST00000488596 KIFC2Q96AC6 838 aa7.99□□□□□ -1.13
CD46-215ENST00000488596 MRGPRX2Q96LB1 330 aa7.99□□□□□ -1.13
CD46-215ENST00000488596 J3QL48 77 aa7.98□□□□□ -1.13
CD46-215ENST00000488596 SNRPBP14678 240 aaKnown RBP7.98□□□□□ -1.13
CD46-215ENST00000488596 SNIP1Q8TAD8 396 aaKnown RBP7.98□□□□□ -1.13
CD46-215ENST00000488596 SKOR1P84550 965 aa7.97□□□□□ -1.13
CD46-215ENST00000488596 KRI1Q8N9T8 703 aaKnown RBP7.96□□□□□ -1.14
CD46-215ENST00000488596 SLC16A10Q8TF71 515 aa7.96□□□□□ -1.14
CD46-215ENST00000488596 JUNDP17535 347 aa7.95□□□□□ -1.14
CD46-215ENST00000488596 RC3H1Q5TC82 1133 aaKnown RBP7.95□□□□□ -1.14
CD46-215ENST00000488596 NUTM1Q86Y26 1132 aa7.95□□□□□ -1.14
CD46-215ENST00000488596 PCDHGC3Q9UN70 934 aa7.95□□□□□ -1.14
CD46-215ENST00000488596 SSTR3P32745 418 aaPredicted RBP7.94□□□□□ -1.14
CD46-215ENST00000488596 PTCRAQ6ISU1 281 aaPredicted RBP7.94□□□□□ -1.14
CD46-215ENST00000488596 RETREG3Q86VR2 466 aa7.93□□□□□ -1.14
CD46-215ENST00000488596 HPS1Q92902 700 aa7.93□□□□□ -1.14
CD46-215ENST00000488596 FDX1P10109 184 aa7.92□□□□□ -1.14
CD46-215ENST00000488596 WNT7BP56706 349 aa7.92□□□□□ -1.14
CD46-215ENST00000488596 NPAS3Q8IXF0 933 aa7.92□□□□□ -1.14
CD46-215ENST00000488596 ZSCAN1Q8NBB4 408 aa7.92□□□□□ -1.14
CD46-215ENST00000488596 SPIRE2Q8WWL2 714 aa7.92□□□□□ -1.14
CD46-215ENST00000488596 ZMYND10O75800 440 aa7.91□□□□□ -1.14
CD46-215ENST00000488596 NDUFV2P19404 249 aa7.91□□□□□ -1.14
CD46-215ENST00000488596 BARGINQ6ZT62 677 aa7.91□□□□□ -1.14
CD46-215ENST00000488596 NUDT12Q9BQG2 462 aa7.91□□□□□ -1.14
CD46-215ENST00000488596 C6orf229H3BNL8 230 aa7.9□□□□□ -1.14
CD46-215ENST00000488596 NXF1Q9UBU9 619 aaKnown RBP7.9□□□□□ -1.14
CD46-215ENST00000488596 MOXD2PA6NHM9 499 aa7.89□□□□□ -1.15
CD46-215ENST00000488596 ZC3H15Q8WU90 426 aaKnown RBP7.89□□□□□ -1.15
CD46-215ENST00000488596 IRF7Q92985 503 aa7.89□□□□□ -1.15
CD46-215ENST00000488596 SIAH2O43255 324 aa7.88□□□□□ -1.15
CD46-215ENST00000488596 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
CD46-215ENST00000488596 TTLL12Q14166 644 aaPredicted RBP7.88□□□□□ -1.15
CD46-215ENST00000488596 ALDH1A1P00352 501 aa7.87□□□□□ -1.15
CD46-215ENST00000488596 GMPRP36959 345 aa7.87□□□□□ -1.15
CD46-215ENST00000488596 AMHR2Q16671 573 aa7.87□□□□□ -1.15
CD46-215ENST00000488596 CCNYL3P0C7X3 344 aa7.86□□□□□ -1.15
CD46-215ENST00000488596 MS4A1P11836 297 aa7.86□□□□□ -1.15
CD46-215ENST00000488596 SH3BP2P78314 561 aa7.86□□□□□ -1.15
CD46-215ENST00000488596 GIGYF2Q6Y7W6 1299 aaKnown RBP7.86□□□□□ -1.15
CD46-215ENST00000488596 EVA1BQ9NVM1 165 aa7.85□□□□□ -1.15
CD46-215ENST00000488596 PTPRNQ16849 979 aa7.84□□□□□ -1.15
CD46-215ENST00000488596 EHBP1Q8NDI1 1231 aa7.84□□□□□ -1.15
CD46-215ENST00000488596 PRR7Q8TB68 274 aa7.84□□□□□ -1.15
CD46-215ENST00000488596 BEGAINQ9BUH8 593 aa7.84□□□□□ -1.15
CD46-215ENST00000488596 UNC93B1Q9H1C4 597 aa7.84□□□□□ -1.15
CD46-215ENST00000488596 MTMR2Q13614 643 aa7.83□□□□□ -1.16
CD46-215ENST00000488596 SUZ12Q15022 739 aaKnown RBP7.83□□□□□ -1.16
CD46-215ENST00000488596 KCNH2Q12809 1159 aa7.82□□□□□ -1.16
CD46-215ENST00000488596 BAP1Q92560 729 aa7.82□□□□□ -1.16
CD46-215ENST00000488596 TBC1D2Q9BYX2 928 aa7.82□□□□□ -1.16
CD46-215ENST00000488596 H3BM21 787 aa7.81□□□□□ -1.16
CD46-215ENST00000488596 LINC01559Q495D7 138 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms