RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 ORAI2Q96SN7 254 aa18.54■□□□□ 0.56
TTC3-221ENST00000488522 QTRT2Q9H974 415 aaKnown RBP18.54■□□□□ 0.56
TTC3-221ENST00000488522 IFT172Q9UG01 1749 aa18.54■□□□□ 0.56
TTC3-221ENST00000488522 PXDNQ92626 1479 aa18.52■□□□□ 0.56
TTC3-221ENST00000488522 KNDC1Q76NI1 1749 aa18.52■□□□□ 0.56
TTC3-221ENST00000488522 SPATA31E1Q6ZUB1 1445 aa18.51■□□□□ 0.55
TTC3-221ENST00000488522 FNBP4Q8N3X1 1017 aaPredicted RBP18.51■□□□□ 0.55
TTC3-221ENST00000488522 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
TTC3-221ENST00000488522 ATRNO75882 1429 aa18.5■□□□□ 0.55
TTC3-221ENST00000488522 MARF1Q9Y4F3 1742 aaKnown RBP18.5■□□□□ 0.55
TTC3-221ENST00000488522 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
TTC3-221ENST00000488522 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
TTC3-221ENST00000488522 LRPPRCP42704 1394 aaKnown RBP18.47■□□□□ 0.55
TTC3-221ENST00000488522 ANKRD30BQ9BXX2 1392 aa18.47■□□□□ 0.55
TTC3-221ENST00000488522 ADAMTS2O95450 1211 aa18.47■□□□□ 0.55
TTC3-221ENST00000488522 TRPC5Q9UL62 973 aaPredicted RBP18.47■□□□□ 0.55
TTC3-221ENST00000488522 CCDC144AA2RUR9 1427 aa18.47■□□□□ 0.55
TTC3-221ENST00000488522 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.46■□□□□ 0.55
TTC3-221ENST00000488522 ATAD2Q6PL18 1390 aa18.46■□□□□ 0.55
TTC3-221ENST00000488522 ABCC11Q96J66 1382 aa18.46■□□□□ 0.55
TTC3-221ENST00000488522 USP21Q9UK80 565 aa18.46■□□□□ 0.55
TTC3-221ENST00000488522 PIK3C2GO75747 1445 aa18.46■□□□□ 0.55
TTC3-221ENST00000488522 ADGRF5Q8IZF2 1346 aa18.46■□□□□ 0.55
TTC3-221ENST00000488522 FMN2Q9NZ56 1722 aa18.45■□□□□ 0.54
TTC3-221ENST00000488522 BCL9LQ86UU0 1499 aa18.45■□□□□ 0.54
TTC3-221ENST00000488522 EP400Q96L91 3159 aa18.44■□□□□ 0.54
TTC3-221ENST00000488522 KIF1AQ12756 1690 aa18.44■□□□□ 0.54
TTC3-221ENST00000488522 SRCAPQ6ZRS2 3230 aa18.42■□□□□ 0.54
TTC3-221ENST00000488522 ESCO1Q5FWF5 840 aa18.41■□□□□ 0.54
TTC3-221ENST00000488522 NRXN1Q9ULB1 1477 aa18.4■□□□□ 0.54
TTC3-221ENST00000488522 SIRT1Q96EB6 747 aa18.39■□□□□ 0.53
TTC3-221ENST00000488522 YTHDC2Q9H6S0 1430 aaKnown RBP18.39■□□□□ 0.53
TTC3-221ENST00000488522 SLIT2O94813 1529 aa18.39■□□□□ 0.53
TTC3-221ENST00000488522 FOXO3O43524 673 aa18.38■□□□□ 0.53
TTC3-221ENST00000488522 PLEKHH1Q9ULM0 1364 aa18.38■□□□□ 0.53
TTC3-221ENST00000488522 WAPLQ7Z5K2 1190 aa18.37■□□□□ 0.53
TTC3-221ENST00000488522 USP32Q8NFA0 1604 aa18.37■□□□□ 0.53
TTC3-221ENST00000488522 SPATA31A3Q5VYP0 1347 aa18.36■□□□□ 0.53
TTC3-221ENST00000488522 MPHOSPH9Q99550 1183 aa18.36■□□□□ 0.53
TTC3-221ENST00000488522 GLI3P10071 1580 aa18.35■□□□□ 0.53
TTC3-221ENST00000488522 ACIN1Q9UKV3 1341 aaKnown RBP18.35■□□□□ 0.53
TTC3-221ENST00000488522 CCDC125Q86Z20 511 aa18.34■□□□□ 0.53
TTC3-221ENST00000488522 GJD4Q96KN9 370 aaPredicted RBP18.34■□□□□ 0.53
TTC3-221ENST00000488522 XPCQ01831 940 aaPredicted RBP18.33■□□□□ 0.52
TTC3-221ENST00000488522 RGL3Q3MIN7 710 aa18.33■□□□□ 0.52
TTC3-221ENST00000488522 STK26Q9P289 416 aa18.33■□□□□ 0.52
TTC3-221ENST00000488522 RALGAPBQ86X10 1494 aa18.33■□□□□ 0.52
TTC3-221ENST00000488522 ABCA3Q99758 1704 aa18.32■□□□□ 0.52
TTC3-221ENST00000488522 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
TTC3-221ENST00000488522 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
TTC3-221ENST00000488522 DLC1Q96QB1 1528 aa18.32■□□□□ 0.52
TTC3-221ENST00000488522 NWD2Q9ULI1 1742 aa18.32■□□□□ 0.52
TTC3-221ENST00000488522 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
TTC3-221ENST00000488522 ADGRB2O60241 1585 aa18.31■□□□□ 0.52
TTC3-221ENST00000488522 RGPD8O14715 1765 aaPredicted RBP18.31■□□□□ 0.52
TTC3-221ENST00000488522 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
TTC3-221ENST00000488522 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
TTC3-221ENST00000488522 NUTM2FA1L443 756 aa18.29■□□□□ 0.52
TTC3-221ENST00000488522 PLCH1Q4KWH8 1693 aa18.28■□□□□ 0.52
TTC3-221ENST00000488522 ANKARQ7Z5J8 1434 aa18.28■□□□□ 0.52
TTC3-221ENST00000488522 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
TTC3-221ENST00000488522 KRT28Q7Z3Y7 464 aa18.27■□□□□ 0.52
TTC3-221ENST00000488522 BRWD3Q6RI45 1802 aa18.27■□□□□ 0.52
TTC3-221ENST00000488522 ADGRB1O14514 1584 aa18.26■□□□□ 0.51
TTC3-221ENST00000488522 BLMP54132 1417 aaPredicted RBP18.26■□□□□ 0.51
TTC3-221ENST00000488522 ZRANB1Q9UGI0 708 aa18.25■□□□□ 0.51
TTC3-221ENST00000488522 PHF8Q9UPP1 1060 aa18.25■□□□□ 0.51
TTC3-221ENST00000488522 ARHGEF10O15013 1369 aa18.25■□□□□ 0.51
TTC3-221ENST00000488522 TRPM3Q9HCF6 1732 aaPredicted RBP18.24■□□□□ 0.51
TTC3-221ENST00000488522 ONECUT3O60422 494 aaPredicted RBP18.23■□□□□ 0.51
TTC3-221ENST00000488522 PSME1Q06323 249 aa18.23■□□□□ 0.51
TTC3-221ENST00000488522 VPS72Q15906 364 aa18.23■□□□□ 0.51
TTC3-221ENST00000488522 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
TTC3-221ENST00000488522 NRAPQ86VF7 1730 aa18.22■□□□□ 0.51
TTC3-221ENST00000488522 ALS2Q96Q42 1657 aa18.22■□□□□ 0.51
TTC3-221ENST00000488522 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
TTC3-221ENST00000488522 CRYBG1Q9Y4K1 1723 aa18.19■□□□□ 0.5
TTC3-221ENST00000488522 TULP4Q9NRJ4 1543 aa18.18■□□□□ 0.5
TTC3-221ENST00000488522 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
TTC3-221ENST00000488522 SEPT12Q8IYM1 358 aa18.17■□□□□ 0.5
TTC3-221ENST00000488522 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
TTC3-221ENST00000488522 CABLES1Q8TDN4 633 aa18.16■□□□□ 0.5
TTC3-221ENST00000488522 RAB3GAP2Q9H2M9 1393 aa18.15■□□□□ 0.5
TTC3-221ENST00000488522 LRP5O75197 1615 aa18.14■□□□□ 0.49
TTC3-221ENST00000488522 HAP1P54257 671 aaPredicted RBP18.14■□□□□ 0.49
TTC3-221ENST00000488522 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
TTC3-221ENST00000488522 STAC3Q96MF2 364 aa18.13■□□□□ 0.49
TTC3-221ENST00000488522 POGKQ9P215 609 aa18.13■□□□□ 0.49
TTC3-221ENST00000488522 PRR36Q9H6K5 1346 aa18.13■□□□□ 0.49
TTC3-221ENST00000488522 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
TTC3-221ENST00000488522 KRT27Q7Z3Y8 459 aa18.12■□□□□ 0.49
TTC3-221ENST00000488522 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
TTC3-221ENST00000488522 PMFBP1Q8TBY8 1022 aa18.11■□□□□ 0.49
TTC3-221ENST00000488522 GPRASP1Q5JY77 1395 aa18.11■□□□□ 0.49
TTC3-221ENST00000488522 THSD7AQ9UPZ6 1657 aa18.11■□□□□ 0.49
TTC3-221ENST00000488522 ITSN1Q15811 1721 aa18.11■□□□□ 0.49
TTC3-221ENST00000488522 ARHGEF28Q8N1W1 1705 aaKnown RBP18.11■□□□□ 0.49
TTC3-221ENST00000488522 ATP7BP35670 1465 aa18.09■□□□□ 0.49
TTC3-221ENST00000488522 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
TTC3-221ENST00000488522 SF3B2Q13435 895 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms