RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 CDC42BPGQ6DT37 1551 aa23.14■■□□□ 1.3
ERGIC3-216ENST00000488384 SLAIN2Q9P270 581 aa23.14■■□□□ 1.29
ERGIC3-216ENST00000488384 MST1RQ04912 1400 aa23.14■■□□□ 1.29
ERGIC3-216ENST00000488384 WAPLQ7Z5K2 1190 aa23.12■■□□□ 1.29
ERGIC3-216ENST00000488384 AHDC1Q5TGY3 1603 aaPredicted RBP23.11■■□□□ 1.29
ERGIC3-216ENST00000488384 SIRT1Q96EB6 747 aa23.1■■□□□ 1.29
ERGIC3-216ENST00000488384 ARHGEF28Q8N1W1 1705 aaKnown RBP23.09■■□□□ 1.29
ERGIC3-216ENST00000488384 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.29
ERGIC3-216ENST00000488384 RGS17Q9UGC6 210 aaPredicted RBP23.07■■□□□ 1.28
ERGIC3-216ENST00000488384 TONSLQ96HA7 1378 aa23.06■■□□□ 1.28
ERGIC3-216ENST00000488384 PRAM1Q96QH2 718 aa23.06■■□□□ 1.28
ERGIC3-216ENST00000488384 C1orf167Q5SNV9 1468 aa23.05■■□□□ 1.28
ERGIC3-216ENST00000488384 TRAK1Q9UPV9 953 aa23.05■■□□□ 1.28
ERGIC3-216ENST00000488384 ADGRB2O60241 1585 aa23.05■■□□□ 1.28
ERGIC3-216ENST00000488384 NHSL1Q5SYE7 1610 aa23.04■■□□□ 1.28
ERGIC3-216ENST00000488384 SHPRHQ149N8 1683 aa23.04■■□□□ 1.28
ERGIC3-216ENST00000488384 NBPF1Q3BBV0 1214 aa23.04■■□□□ 1.28
ERGIC3-216ENST00000488384 FMN2Q9NZ56 1722 aa23.04■■□□□ 1.28
ERGIC3-216ENST00000488384 BRINP3Q76B58 766 aa23.03■■□□□ 1.28
ERGIC3-216ENST00000488384 SAFB2Q14151 953 aaKnown RBP eCLIP23.01■■□□□ 1.27
ERGIC3-216ENST00000488384 POGKQ9P215 609 aa23■■□□□ 1.27
ERGIC3-216ENST00000488384 CLSPNQ9HAW4 1339 aa23■■□□□ 1.27
ERGIC3-216ENST00000488384 LRP6O75581 1613 aa23■■□□□ 1.27
ERGIC3-216ENST00000488384 NBPF8Q3BBV2 869 aa22.99■■□□□ 1.27
ERGIC3-216ENST00000488384 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
ERGIC3-216ENST00000488384 JCADQ9P266 1359 aa22.96■■□□□ 1.27
ERGIC3-216ENST00000488384 ROCK2O75116 1388 aaKnown RBP22.95■■□□□ 1.26
ERGIC3-216ENST00000488384 RALGAPBQ86X10 1494 aa22.95■■□□□ 1.26
ERGIC3-216ENST00000488384 GPRASP1Q5JY77 1395 aa22.94■■□□□ 1.26
ERGIC3-216ENST00000488384 USP32Q8NFA0 1604 aa22.93■■□□□ 1.26
ERGIC3-216ENST00000488384 MINK1Q8N4C8 1332 aaPredicted RBP22.93■■□□□ 1.26
ERGIC3-216ENST00000488384 ORAI2Q96SN7 254 aa22.93■■□□□ 1.26
ERGIC3-216ENST00000488384 NUTM2FA1L443 756 aa22.91■■□□□ 1.26
ERGIC3-216ENST00000488384 HIRIP3Q9BW71 556 aaPredicted RBP22.91■■□□□ 1.26
ERGIC3-216ENST00000488384 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
ERGIC3-216ENST00000488384 RGPD8O14715 1765 aaPredicted RBP22.9■■□□□ 1.26
ERGIC3-216ENST00000488384 KIF1AQ12756 1690 aa22.9■■□□□ 1.26
ERGIC3-216ENST00000488384 ANKARQ7Z5J8 1434 aa22.9■■□□□ 1.26
ERGIC3-216ENST00000488384 TULP4Q9NRJ4 1543 aa22.89■■□□□ 1.26
ERGIC3-216ENST00000488384 POTEAQ6S8J7 498 aa22.89■■□□□ 1.25
ERGIC3-216ENST00000488384 CCER1Q8TC90 406 aaPredicted RBP22.89■■□□□ 1.25
ERGIC3-216ENST00000488384 DDX17Q92841 729 aaKnown RBP22.89■■□□□ 1.25
ERGIC3-216ENST00000488384 ESCO1Q5FWF5 840 aa22.87■■□□□ 1.25
ERGIC3-216ENST00000488384 CENPJQ9HC77 1338 aaPredicted RBP22.86■■□□□ 1.25
ERGIC3-216ENST00000488384 EIF3AQ14152 1382 aaKnown RBP22.86■■□□□ 1.25
ERGIC3-216ENST00000488384 WASLO00401 505 aaPredicted RBP22.85■■□□□ 1.25
ERGIC3-216ENST00000488384 ATP7BP35670 1465 aa22.85■■□□□ 1.25
ERGIC3-216ENST00000488384 PXDNQ92626 1479 aa22.85■■□□□ 1.25
ERGIC3-216ENST00000488384 PRR36Q9H6K5 1346 aa22.84■■□□□ 1.25
ERGIC3-216ENST00000488384 TIMELESSQ9UNS1 1208 aa22.83■■□□□ 1.25
ERGIC3-216ENST00000488384 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
ERGIC3-216ENST00000488384 SPATA31A6Q5VVP1 1343 aa22.82■■□□□ 1.24
ERGIC3-216ENST00000488384 NPHP3Q7Z494 1330 aa22.82■■□□□ 1.24
ERGIC3-216ENST00000488384 CARD11Q9BXL7 1154 aa22.81■■□□□ 1.24
ERGIC3-216ENST00000488384 TOPAZ1Q8N9V7 1692 aa22.81■■□□□ 1.24
ERGIC3-216ENST00000488384 ITSN1Q15811 1721 aa22.8■■□□□ 1.24
ERGIC3-216ENST00000488384 PHF8Q9UPP1 1060 aa22.79■■□□□ 1.24
ERGIC3-216ENST00000488384 FOXO3O43524 673 aa22.78■■□□□ 1.24
ERGIC3-216ENST00000488384 PNPLA6Q8IY17 1366 aa22.77■■□□□ 1.24
ERGIC3-216ENST00000488384 LRRC59Q96AG4 307 aaKnown RBP22.77■■□□□ 1.24
ERGIC3-216ENST00000488384 CDK19Q9BWU1 502 aa22.77■■□□□ 1.24
ERGIC3-216ENST00000488384 XPCQ01831 940 aaPredicted RBP22.76■■□□□ 1.23
ERGIC3-216ENST00000488384 COL22A1Q8NFW1 1626 aaPredicted RBP22.75■■□□□ 1.23
ERGIC3-216ENST00000488384 SBNO2Q9Y2G9 1366 aa22.75■■□□□ 1.23
ERGIC3-216ENST00000488384 NUDT16Q96DE0 195 aaKnown RBP22.74■■□□□ 1.23
ERGIC3-216ENST00000488384 PMFBP1Q8TBY8 1022 aa22.73■■□□□ 1.23
ERGIC3-216ENST00000488384 TRPM3Q9HCF6 1732 aaPredicted RBP22.71■■□□□ 1.23
ERGIC3-216ENST00000488384 TNS3Q68CZ2 1445 aa22.69■■□□□ 1.22
ERGIC3-216ENST00000488384 EVC2Q86UK5 1308 aa22.69■■□□□ 1.22
ERGIC3-216ENST00000488384 SRPK2P78362 688 aaKnown RBP22.69■■□□□ 1.22
ERGIC3-216ENST00000488384 KRT28Q7Z3Y7 464 aa22.69■■□□□ 1.22
ERGIC3-216ENST00000488384 CABP2Q9NPB3 220 aa22.69■■□□□ 1.22
ERGIC3-216ENST00000488384 SBNO1A3KN83 1393 aa22.67■■□□□ 1.22
ERGIC3-216ENST00000488384 USP47Q96K76 1375 aa22.67■■□□□ 1.22
ERGIC3-216ENST00000488384 SPATA31A3Q5VYP0 1347 aa22.67■■□□□ 1.22
ERGIC3-216ENST00000488384 CCDC61Q9Y6R9 512 aa22.67■■□□□ 1.22
ERGIC3-216ENST00000488384 PPIP5K1Q6PFW1 1433 aa22.66■■□□□ 1.22
ERGIC3-216ENST00000488384 POLR3AO14802 1390 aaPredicted RBP22.66■■□□□ 1.22
ERGIC3-216ENST00000488384 MARF1Q9Y4F3 1742 aaKnown RBP22.66■■□□□ 1.22
ERGIC3-216ENST00000488384 NUTM2BA6NNL0 878 aaPredicted RBP22.65■■□□□ 1.22
ERGIC3-216ENST00000488384 NUTM2EB1AL46 878 aaPredicted RBP22.65■■□□□ 1.22
ERGIC3-216ENST00000488384 NUTM2AQ8IVF1 878 aaPredicted RBP22.65■■□□□ 1.22
ERGIC3-216ENST00000488384 ALS2Q96Q42 1657 aa22.65■■□□□ 1.22
ERGIC3-216ENST00000488384 PSME1Q06323 249 aa22.64■■□□□ 1.21
ERGIC3-216ENST00000488384 NGDNQ8NEJ9 315 aaKnown RBP22.64■■□□□ 1.21
ERGIC3-216ENST00000488384 PLEKHG3A1L390 1219 aa22.63■■□□□ 1.21
ERGIC3-216ENST00000488384 MEX3CQ5U5Q3 659 aaKnown RBP22.63■■□□□ 1.21
ERGIC3-216ENST00000488384 ST20-MTHFSA0A0A6YYL1 179 aa22.62■■□□□ 1.21
ERGIC3-216ENST00000488384 TESK2Q96S53 571 aa22.62■■□□□ 1.21
ERGIC3-216ENST00000488384 ACEP12821 1306 aa22.61■■□□□ 1.21
ERGIC3-216ENST00000488384 ABCA3Q99758 1704 aa22.61■■□□□ 1.21
ERGIC3-216ENST00000488384 AFF2P51816 1311 aa22.6■■□□□ 1.21
ERGIC3-216ENST00000488384 ZNF772Q68DY9 489 aaPredicted RBP22.6■■□□□ 1.21
ERGIC3-216ENST00000488384 ARHGEF10O15013 1369 aa22.6■■□□□ 1.21
ERGIC3-216ENST00000488384 ATAD2Q6PL18 1390 aa22.6■■□□□ 1.21
ERGIC3-216ENST00000488384 CDK12Q9NYV4 1490 aaPredicted RBP22.6■■□□□ 1.21
ERGIC3-216ENST00000488384 CABP1Q9NZU7 370 aa22.57■■□□□ 1.2
ERGIC3-216ENST00000488384 CRYBG1Q9Y4K1 1723 aa22.57■■□□□ 1.2
ERGIC3-216ENST00000488384 AKAP12Q02952 1782 aa22.55■■□□□ 1.2
ERGIC3-216ENST00000488384 RGS12O14924 1447 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms