RNA–Protein interactions for RNA: ENST00000488145.1

NPDC1-205, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-205ENST00000488145 DLC1Q96QB1 1528 aa26.16■■□□□ 1.78
NPDC1-205ENST00000488145 SIRT1Q96EB6 747 aa26.16■■□□□ 1.78
NPDC1-205ENST00000488145 CDC42BPGQ6DT37 1551 aa26.16■■□□□ 1.78
NPDC1-205ENST00000488145 PLEKHH1Q9ULM0 1364 aa26.15■■□□□ 1.78
NPDC1-205ENST00000488145 TRAK1Q9UPV9 953 aa26.11■■□□□ 1.77
NPDC1-205ENST00000488145 BRINP3Q76B58 766 aa26.1■■□□□ 1.77
NPDC1-205ENST00000488145 PRAM1Q96QH2 718 aa26.1■■□□□ 1.77
NPDC1-205ENST00000488145 ARHGEF28Q8N1W1 1705 aaKnown RBP26.1■■□□□ 1.77
NPDC1-205ENST00000488145 POGKQ9P215 609 aa26.09■■□□□ 1.77
NPDC1-205ENST00000488145 AHDC1Q5TGY3 1603 aaPredicted RBP26.09■■□□□ 1.77
NPDC1-205ENST00000488145 C1orf167Q5SNV9 1468 aa26.09■■□□□ 1.77
NPDC1-205ENST00000488145 FMN2Q9NZ56 1722 aa26.08■■□□□ 1.77
NPDC1-205ENST00000488145 SAFB2Q14151 953 aaKnown RBP eCLIP26.07■■□□□ 1.76
NPDC1-205ENST00000488145 TONSLQ96HA7 1378 aa26.07■■□□□ 1.76
NPDC1-205ENST00000488145 NHSL1Q5SYE7 1610 aa26.06■■□□□ 1.76
NPDC1-205ENST00000488145 TRPM1Q7Z4N2 1603 aa26.06■■□□□ 1.76
NPDC1-205ENST00000488145 COL16A1Q07092 1604 aaPredicted RBP26.06■■□□□ 1.76
NPDC1-205ENST00000488145 NBPF1Q3BBV0 1214 aa26.03■■□□□ 1.76
NPDC1-205ENST00000488145 ADGRB2O60241 1585 aa26.03■■□□□ 1.76
NPDC1-205ENST00000488145 RGPD8O14715 1765 aaPredicted RBP26■■□□□ 1.75
NPDC1-205ENST00000488145 NUTM2FA1L443 756 aa25.99■■□□□ 1.75
NPDC1-205ENST00000488145 ORAI2Q96SN7 254 aa25.99■■□□□ 1.75
NPDC1-205ENST00000488145 MINK1Q8N4C8 1332 aaPredicted RBP25.97■■□□□ 1.75
NPDC1-205ENST00000488145 ESCO1Q5FWF5 840 aa25.96■■□□□ 1.75
NPDC1-205ENST00000488145 JCADQ9P266 1359 aa25.95■■□□□ 1.75
NPDC1-205ENST00000488145 ROCK2O75116 1388 aaKnown RBP25.95■■□□□ 1.74
NPDC1-205ENST00000488145 KIF1AQ12756 1690 aa25.94■■□□□ 1.74
NPDC1-205ENST00000488145 SHPRHQ149N8 1683 aa25.94■■□□□ 1.74
NPDC1-205ENST00000488145 DDX17Q92841 729 aaKnown RBP25.94■■□□□ 1.74
NPDC1-205ENST00000488145 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
NPDC1-205ENST00000488145 HIRIP3Q9BW71 556 aaPredicted RBP25.94■■□□□ 1.74
NPDC1-205ENST00000488145 CLSPNQ9HAW4 1339 aa25.93■■□□□ 1.74
NPDC1-205ENST00000488145 NBPF8Q3BBV2 869 aa25.93■■□□□ 1.74
NPDC1-205ENST00000488145 RGS17Q9UGC6 210 aaPredicted RBP25.93■■□□□ 1.74
NPDC1-205ENST00000488145 QRICH2Q9H0J4 1663 aa25.91■■□□□ 1.74
NPDC1-205ENST00000488145 EIF3AQ14152 1382 aaKnown RBP25.91■■□□□ 1.74
NPDC1-205ENST00000488145 USP32Q8NFA0 1604 aa25.91■■□□□ 1.74
NPDC1-205ENST00000488145 ANKARQ7Z5J8 1434 aa25.9■■□□□ 1.74
NPDC1-205ENST00000488145 WASLO00401 505 aaPredicted RBP25.88■■□□□ 1.73
NPDC1-205ENST00000488145 LRRC59Q96AG4 307 aaKnown RBP25.88■■□□□ 1.73
NPDC1-205ENST00000488145 TULP4Q9NRJ4 1543 aa25.88■■□□□ 1.73
NPDC1-205ENST00000488145 NPHP3Q7Z494 1330 aa25.88■■□□□ 1.73
NPDC1-205ENST00000488145 CENPJQ9HC77 1338 aaPredicted RBP25.88■■□□□ 1.73
NPDC1-205ENST00000488145 RALGAPBQ86X10 1494 aa25.87■■□□□ 1.73
NPDC1-205ENST00000488145 CCER1Q8TC90 406 aaPredicted RBP25.87■■□□□ 1.73
NPDC1-205ENST00000488145 SOS2Q07890 1332 aaPredicted RBP25.86■■□□□ 1.73
NPDC1-205ENST00000488145 ITSN1Q15811 1721 aa25.85■■□□□ 1.73
NPDC1-205ENST00000488145 GPRASP1Q5JY77 1395 aa25.85■■□□□ 1.73
NPDC1-205ENST00000488145 FOXO3O43524 673 aa25.85■■□□□ 1.73
NPDC1-205ENST00000488145 PHF8Q9UPP1 1060 aa25.84■■□□□ 1.73
NPDC1-205ENST00000488145 SPATA31A6Q5VVP1 1343 aa25.84■■□□□ 1.73
NPDC1-205ENST00000488145 PXDNQ92626 1479 aa25.82■■□□□ 1.72
NPDC1-205ENST00000488145 CARD11Q9BXL7 1154 aa25.81■■□□□ 1.72
NPDC1-205ENST00000488145 PRR36Q9H6K5 1346 aa25.81■■□□□ 1.72
NPDC1-205ENST00000488145 CDK19Q9BWU1 502 aa25.8■■□□□ 1.72
NPDC1-205ENST00000488145 PNPLA6Q8IY17 1366 aa25.8■■□□□ 1.72
NPDC1-205ENST00000488145 XPCQ01831 940 aaPredicted RBP25.79■■□□□ 1.72
NPDC1-205ENST00000488145 TIMELESSQ9UNS1 1208 aa25.79■■□□□ 1.72
NPDC1-205ENST00000488145 ATP7BP35670 1465 aa25.79■■□□□ 1.72
NPDC1-205ENST00000488145 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
NPDC1-205ENST00000488145 LRP6O75581 1613 aa25.77■■□□□ 1.72
NPDC1-205ENST00000488145 NUDT16Q96DE0 195 aaKnown RBP25.76■■□□□ 1.71
NPDC1-205ENST00000488145 TOPAZ1Q8N9V7 1692 aa25.76■■□□□ 1.71
NPDC1-205ENST00000488145 KRT28Q7Z3Y7 464 aa25.75■■□□□ 1.71
NPDC1-205ENST00000488145 COL22A1Q8NFW1 1626 aaPredicted RBP25.74■■□□□ 1.71
NPDC1-205ENST00000488145 NUTM2BA6NNL0 878 aaPredicted RBP25.74■■□□□ 1.71
NPDC1-205ENST00000488145 NUTM2EB1AL46 878 aaPredicted RBP25.74■■□□□ 1.71
NPDC1-205ENST00000488145 NUTM2AQ8IVF1 878 aaPredicted RBP25.74■■□□□ 1.71
NPDC1-205ENST00000488145 SRPK2P78362 688 aaKnown RBP25.73■■□□□ 1.71
NPDC1-205ENST00000488145 PSME1Q06323 249 aa25.73■■□□□ 1.71
NPDC1-205ENST00000488145 MEX3CQ5U5Q3 659 aaKnown RBP25.73■■□□□ 1.71
NPDC1-205ENST00000488145 POTEAQ6S8J7 498 aa25.73■■□□□ 1.71
NPDC1-205ENST00000488145 EVC2Q86UK5 1308 aa25.7■■□□□ 1.71
NPDC1-205ENST00000488145 NGDNQ8NEJ9 315 aaKnown RBP25.7■■□□□ 1.7
NPDC1-205ENST00000488145 SPATA31A3Q5VYP0 1347 aa25.69■■□□□ 1.7
NPDC1-205ENST00000488145 TRPM3Q9HCF6 1732 aaPredicted RBP25.69■■□□□ 1.7
NPDC1-205ENST00000488145 CCDC61Q9Y6R9 512 aa25.69■■□□□ 1.7
NPDC1-205ENST00000488145 CABP2Q9NPB3 220 aa25.68■■□□□ 1.7
NPDC1-205ENST00000488145 TNS3Q68CZ2 1445 aa25.68■■□□□ 1.7
NPDC1-205ENST00000488145 SBNO1A3KN83 1393 aa25.68■■□□□ 1.7
NPDC1-205ENST00000488145 SBNO2Q9Y2G9 1366 aa25.67■■□□□ 1.7
NPDC1-205ENST00000488145 PPIP5K1Q6PFW1 1433 aa25.64■■□□□ 1.7
NPDC1-205ENST00000488145 MARF1Q9Y4F3 1742 aaKnown RBP25.63■■□□□ 1.69
NPDC1-205ENST00000488145 ALS2Q96Q42 1657 aa25.63■■□□□ 1.69
NPDC1-205ENST00000488145 POLR3AO14802 1390 aaPredicted RBP25.62■■□□□ 1.69
NPDC1-205ENST00000488145 ARHGEF10O15013 1369 aa25.62■■□□□ 1.69
NPDC1-205ENST00000488145 PLEKHG3A1L390 1219 aa25.62■■□□□ 1.69
NPDC1-205ENST00000488145 LMOD2Q6P5Q4 547 aa25.62■■□□□ 1.69
NPDC1-205ENST00000488145 ACEP12821 1306 aa25.61■■□□□ 1.69
NPDC1-205ENST00000488145 ADAMTS2O95450 1211 aa25.6■■□□□ 1.69
NPDC1-205ENST00000488145 ABCA3Q99758 1704 aa25.59■■□□□ 1.69
NPDC1-205ENST00000488145 PAK3O75914 559 aaPredicted RBP25.58■■□□□ 1.69
NPDC1-205ENST00000488145 C8orf37Q96NL8 207 aa25.58■■□□□ 1.69
NPDC1-205ENST00000488145 USP47Q96K76 1375 aa25.57■■□□□ 1.68
NPDC1-205ENST00000488145 ST20-MTHFSA0A0A6YYL1 179 aa25.57■■□□□ 1.68
NPDC1-205ENST00000488145 ATAD2Q6PL18 1390 aa25.56■■□□□ 1.68
NPDC1-205ENST00000488145 CABP1Q9NZU7 370 aa25.56■■□□□ 1.68
NPDC1-205ENST00000488145 ZNF772Q68DY9 489 aaPredicted RBP25.55■■□□□ 1.68
NPDC1-205ENST00000488145 AFF2P51816 1311 aa25.55■■□□□ 1.68
NPDC1-205ENST00000488145 HAP1P54257 671 aaPredicted RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms