RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 KIAA1210Q9ULL0 1709 aa24.52■■□□□ 1.52
SHROOM1-205ENST00000488072 SIRT1Q96EB6 747 aa24.52■■□□□ 1.52
SHROOM1-205ENST00000488072 MINK1Q8N4C8 1332 aaPredicted RBP24.52■■□□□ 1.52
SHROOM1-205ENST00000488072 FAM135BQ49AJ0 1406 aa24.52■■□□□ 1.52
SHROOM1-205ENST00000488072 ATF3P18847 181 aa24.51■■□□□ 1.51
SHROOM1-205ENST00000488072 DLC1Q96QB1 1528 aa24.51■■□□□ 1.51
SHROOM1-205ENST00000488072 SLAIN2Q9P270 581 aa24.5■■□□□ 1.51
SHROOM1-205ENST00000488072 RALGAPBQ86X10 1494 aa24.48■■□□□ 1.51
SHROOM1-205ENST00000488072 CARD11Q9BXL7 1154 aa24.47■■□□□ 1.51
SHROOM1-205ENST00000488072 ARHGEF28Q8N1W1 1705 aaKnown RBP24.47■■□□□ 1.51
SHROOM1-205ENST00000488072 MST1RQ04912 1400 aa24.46■■□□□ 1.51
SHROOM1-205ENST00000488072 CADPS2Q86UW7 1296 aa24.46■■□□□ 1.51
SHROOM1-205ENST00000488072 GPRASP1Q5JY77 1395 aa24.45■■□□□ 1.5
SHROOM1-205ENST00000488072 TIMELESSQ9UNS1 1208 aa24.45■■□□□ 1.5
SHROOM1-205ENST00000488072 HSPA1LP34931 641 aa24.43■■□□□ 1.5
SHROOM1-205ENST00000488072 DDX17Q92841 729 aaKnown RBP24.43■■□□□ 1.5
SHROOM1-205ENST00000488072 ORAI2Q96SN7 254 aa24.43■■□□□ 1.5
SHROOM1-205ENST00000488072 BRINP3Q76B58 766 aa24.41■■□□□ 1.5
SHROOM1-205ENST00000488072 DCCP43146 1447 aa24.41■■□□□ 1.5
SHROOM1-205ENST00000488072 CENPJQ9HC77 1338 aaPredicted RBP24.4■■□□□ 1.5
SHROOM1-205ENST00000488072 C1orf167Q5SNV9 1468 aa24.4■■□□□ 1.5
SHROOM1-205ENST00000488072 CDC42BPGQ6DT37 1551 aa24.37■■□□□ 1.49
SHROOM1-205ENST00000488072 ROBO1Q9Y6N7 1651 aa24.37■■□□□ 1.49
SHROOM1-205ENST00000488072 PRR36Q9H6K5 1346 aa24.36■■□□□ 1.49
SHROOM1-205ENST00000488072 WASLO00401 505 aaPredicted RBP24.36■■□□□ 1.49
SHROOM1-205ENST00000488072 ESCO1Q5FWF5 840 aa24.34■■□□□ 1.49
SHROOM1-205ENST00000488072 CDK19Q9BWU1 502 aa24.34■■□□□ 1.49
SHROOM1-205ENST00000488072 FMN2Q9NZ56 1722 aa24.32■■□□□ 1.48
SHROOM1-205ENST00000488072 ST20-MTHFSA0A0A6YYL1 179 aa24.31■■□□□ 1.48
SHROOM1-205ENST00000488072 CABP2Q9NPB3 220 aa24.31■■□□□ 1.48
SHROOM1-205ENST00000488072 ADGRB2O60241 1585 aa24.3■■□□□ 1.48
SHROOM1-205ENST00000488072 XPCQ01831 940 aaPredicted RBP24.3■■□□□ 1.48
SHROOM1-205ENST00000488072 QRICH2Q9H0J4 1663 aa24.3■■□□□ 1.48
SHROOM1-205ENST00000488072 USP32Q8NFA0 1604 aa24.29■■□□□ 1.48
SHROOM1-205ENST00000488072 PMFBP1Q8TBY8 1022 aa24.29■■□□□ 1.48
SHROOM1-205ENST00000488072 TULP4Q9NRJ4 1543 aa24.29■■□□□ 1.48
SHROOM1-205ENST00000488072 USP47Q96K76 1375 aa24.28■■□□□ 1.48
SHROOM1-205ENST00000488072 FOXO3O43524 673 aa24.26■■□□□ 1.47
SHROOM1-205ENST00000488072 NUDT16Q96DE0 195 aaKnown RBP24.26■■□□□ 1.47
SHROOM1-205ENST00000488072 EIF3AQ14152 1382 aaKnown RBP24.26■■□□□ 1.47
SHROOM1-205ENST00000488072 RGPD8O14715 1765 aaPredicted RBP24.25■■□□□ 1.47
SHROOM1-205ENST00000488072 TESK2Q96S53 571 aa24.25■■□□□ 1.47
SHROOM1-205ENST00000488072 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
SHROOM1-205ENST00000488072 PHF8Q9UPP1 1060 aa24.23■■□□□ 1.47
SHROOM1-205ENST00000488072 ATP7BP35670 1465 aa24.23■■□□□ 1.47
SHROOM1-205ENST00000488072 ANKARQ7Z5J8 1434 aa24.2■■□□□ 1.46
SHROOM1-205ENST00000488072 HSPA5P11021 654 aaKnown RBP24.2■■□□□ 1.46
SHROOM1-205ENST00000488072 PHLPP1O60346 1717 aa24.19■■□□□ 1.46
SHROOM1-205ENST00000488072 AHDC1Q5TGY3 1603 aaPredicted RBP24.19■■□□□ 1.46
SHROOM1-205ENST00000488072 COL16A1Q07092 1604 aaPredicted RBP24.18■■□□□ 1.46
SHROOM1-205ENST00000488072 EVC2Q86UK5 1308 aa24.18■■□□□ 1.46
SHROOM1-205ENST00000488072 DISP3Q9P2K9 1392 aa24.17■■□□□ 1.46
SHROOM1-205ENST00000488072 NHSL1Q5SYE7 1610 aa24.17■■□□□ 1.46
SHROOM1-205ENST00000488072 SOS2Q07890 1332 aaPredicted RBP24.15■■□□□ 1.46
SHROOM1-205ENST00000488072 CABP1Q9NZU7 370 aa24.15■■□□□ 1.46
SHROOM1-205ENST00000488072 SBNO2Q9Y2G9 1366 aa24.15■■□□□ 1.46
SHROOM1-205ENST00000488072 KRT28Q7Z3Y7 464 aa24.14■■□□□ 1.45
SHROOM1-205ENST00000488072 CCDC61Q9Y6R9 512 aa24.14■■□□□ 1.45
SHROOM1-205ENST00000488072 PXDNQ92626 1479 aa24.13■■□□□ 1.45
SHROOM1-205ENST00000488072 PPIP5K1Q6PFW1 1433 aa24.12■■□□□ 1.45
SHROOM1-205ENST00000488072 PLEKHG5O94827 1062 aa24.12■■□□□ 1.45
SHROOM1-205ENST00000488072 NGDNQ8NEJ9 315 aaKnown RBP24.12■■□□□ 1.45
SHROOM1-205ENST00000488072 ACEP12821 1306 aa24.11■■□□□ 1.45
SHROOM1-205ENST00000488072 NPHP3Q7Z494 1330 aa24.11■■□□□ 1.45
SHROOM1-205ENST00000488072 EIF4G2P78344 907 aaKnown RBP eCLIP24.11■■□□□ 1.45
SHROOM1-205ENST00000488072 PSME1Q06323 249 aa24.1■■□□□ 1.45
SHROOM1-205ENST00000488072 TOPAZ1Q8N9V7 1692 aa24.09■■□□□ 1.45
SHROOM1-205ENST00000488072 PLEKHG3A1L390 1219 aa24.09■■□□□ 1.45
SHROOM1-205ENST00000488072 C11orf95C9JLR9 678 aaPredicted RBP24.09■■□□□ 1.45
SHROOM1-205ENST00000488072 SLC12A5Q9H2X9 1139 aa24.07■■□□□ 1.44
SHROOM1-205ENST00000488072 KIF1AQ12756 1690 aa24.07■■□□□ 1.44
SHROOM1-205ENST00000488072 PNPLA6Q8IY17 1366 aa24.06■■□□□ 1.44
SHROOM1-205ENST00000488072 TMC1Q8TDI8 760 aa24.06■■□□□ 1.44
SHROOM1-205ENST00000488072 LRRC59Q96AG4 307 aaKnown RBP24.06■■□□□ 1.44
SHROOM1-205ENST00000488072 JCADQ9P266 1359 aa24.05■■□□□ 1.44
SHROOM1-205ENST00000488072 TMF1P82094 1093 aa24.05■■□□□ 1.44
SHROOM1-205ENST00000488072 POLR3AO14802 1390 aaPredicted RBP24.04■■□□□ 1.44
SHROOM1-205ENST00000488072 NUTM2BA6NNL0 878 aaPredicted RBP24.04■■□□□ 1.44
SHROOM1-205ENST00000488072 NUTM2EB1AL46 878 aaPredicted RBP24.04■■□□□ 1.44
SHROOM1-205ENST00000488072 LMOD2Q6P5Q4 547 aa24.04■■□□□ 1.44
SHROOM1-205ENST00000488072 NUTM2AQ8IVF1 878 aaPredicted RBP24.04■■□□□ 1.44
SHROOM1-205ENST00000488072 SPATA31A3Q5VYP0 1347 aa24.04■■□□□ 1.44
SHROOM1-205ENST00000488072 POLR3GLQ9BT43 218 aa24.03■■□□□ 1.44
SHROOM1-205ENST00000488072 PAK3O75914 559 aaPredicted RBP24.02■■□□□ 1.44
SHROOM1-205ENST00000488072 CABLES1Q8TDN4 633 aa24.02■■□□□ 1.44
SHROOM1-205ENST00000488072 ATAD2Q6PL18 1390 aa24.02■■□□□ 1.44
SHROOM1-205ENST00000488072 NUTM2GQ5VZR2 741 aa24.01■■□□□ 1.43
SHROOM1-205ENST00000488072 LRP6O75581 1613 aa24.01■■□□□ 1.43
SHROOM1-205ENST00000488072 ITSN1Q15811 1721 aa24.01■■□□□ 1.43
SHROOM1-205ENST00000488072 CD163L1Q9NR16 1453 aa24■■□□□ 1.43
SHROOM1-205ENST00000488072 TNS3Q68CZ2 1445 aa23.98■■□□□ 1.43
SHROOM1-205ENST00000488072 TRPM3Q9HCF6 1732 aaPredicted RBP23.98■■□□□ 1.43
SHROOM1-205ENST00000488072 SBNO1A3KN83 1393 aa23.97■■□□□ 1.43
SHROOM1-205ENST00000488072 SHPRHQ149N8 1683 aa23.95■■□□□ 1.42
SHROOM1-205ENST00000488072 USP6P35125 1406 aa23.94■■□□□ 1.42
SHROOM1-205ENST00000488072 CPSF1Q10570 1443 aaKnown RBP23.94■■□□□ 1.42
SHROOM1-205ENST00000488072 ADAMTS2O95450 1211 aa23.94■■□□□ 1.42
SHROOM1-205ENST00000488072 PUS7Q96PZ0 661 aaKnown RBP23.94■■□□□ 1.42
SHROOM1-205ENST00000488072 ZRANB1Q9UGI0 708 aa23.94■■□□□ 1.42
SHROOM1-205ENST00000488072 MED1Q15648 1581 aaPredicted RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms