RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.38
TMF1-203ENST00000488010 XRCC6P12956 609 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMF1-203ENST00000488010 NAP1L5Q96NT1 182 aaPredicted RBP12.7□□□□□ -0.38
TMF1-203ENST00000488010 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
TMF1-203ENST00000488010 MCM4P33991 863 aa12.7□□□□□ -0.38
TMF1-203ENST00000488010 UBE2Q2Q8WVN8 375 aa12.69□□□□□ -0.38
TMF1-203ENST00000488010 CFAP53Q96M91 514 aa12.69□□□□□ -0.38
TMF1-203ENST00000488010 POLR3AO14802 1390 aaPredicted RBP12.69□□□□□ -0.38
TMF1-203ENST00000488010 KANK1Q14678 1352 aa12.69□□□□□ -0.38
TMF1-203ENST00000488010 ITPRIPQ8IWB1 547 aa12.69□□□□□ -0.38
TMF1-203ENST00000488010 SMC4Q9NTJ3 1288 aa12.69□□□□□ -0.38
TMF1-203ENST00000488010 CLTCL1P53675 1640 aa12.69□□□□□ -0.38
TMF1-203ENST00000488010 MVPQ14764 893 aaKnown RBP12.69□□□□□ -0.38
TMF1-203ENST00000488010 ZKSCAN2Q63HK3 967 aa12.69□□□□□ -0.38
TMF1-203ENST00000488010 STAC3Q96MF2 364 aa12.69□□□□□ -0.38
TMF1-203ENST00000488010 TMEM132EQ6IEE7 984 aa12.68□□□□□ -0.38
TMF1-203ENST00000488010 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
TMF1-203ENST00000488010 MYH16Q9H6N6 1097 aa12.68□□□□□ -0.38
TMF1-203ENST00000488010 TRPM2O94759 1503 aa12.68□□□□□ -0.38
TMF1-203ENST00000488010 VIRMAQ69YN4 1812 aaKnown RBP12.68□□□□□ -0.38
TMF1-203ENST00000488010 UGGT1Q9NYU2 1555 aa12.68□□□□□ -0.38
TMF1-203ENST00000488010 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
TMF1-203ENST00000488010 TRAK2O60296 914 aa12.67□□□□□ -0.38
TMF1-203ENST00000488010 PLCH2O75038 1416 aa12.67□□□□□ -0.38
TMF1-203ENST00000488010 SPHKAPQ2M3C7 1700 aa12.67□□□□□ -0.38
TMF1-203ENST00000488010 WDR63Q8IWG1 891 aa12.67□□□□□ -0.38
TMF1-203ENST00000488010 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
TMF1-203ENST00000488010 HSCBQ8IWL3 235 aa12.67□□□□□ -0.38
TMF1-203ENST00000488010 CHMP5Q9NZZ3 219 aa12.67□□□□□ -0.38
TMF1-203ENST00000488010 NUTM2DQ5VT03 806 aaPredicted RBP12.66□□□□□ -0.38
TMF1-203ENST00000488010 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.38
TMF1-203ENST00000488010 PNNQ9H307 717 aaKnown RBP12.66□□□□□ -0.38
TMF1-203ENST00000488010 CEP152O94986 1710 aa12.65□□□□□ -0.38
TMF1-203ENST00000488010 EXOSC9Q06265 439 aaKnown RBP12.65□□□□□ -0.38
TMF1-203ENST00000488010 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
TMF1-203ENST00000488010 AAMPQ13685 434 aa12.64□□□□□ -0.39
TMF1-203ENST00000488010 PTPRTO14522 1441 aa12.64□□□□□ -0.39
TMF1-203ENST00000488010 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
TMF1-203ENST00000488010 TRIM27P14373 513 aa12.63□□□□□ -0.39
TMF1-203ENST00000488010 HSP90AA1P07900 732 aaKnown RBP12.62□□□□□ -0.39
TMF1-203ENST00000488010 LNPKQ9C0E8 428 aa12.62□□□□□ -0.39
TMF1-203ENST00000488010 ABCC1P33527 1531 aa12.62□□□□□ -0.39
TMF1-203ENST00000488010 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
TMF1-203ENST00000488010 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
TMF1-203ENST00000488010 NOS1P29475 1434 aa12.61□□□□□ -0.39
TMF1-203ENST00000488010 FSD2A1L4K1 749 aa12.61□□□□□ -0.39
TMF1-203ENST00000488010 HSP90AB1P08238 724 aaKnown RBP12.61□□□□□ -0.39
TMF1-203ENST00000488010 PHF23Q9BUL5 403 aaPredicted RBP12.61□□□□□ -0.39
TMF1-203ENST00000488010 ABCA6Q8N139 1617 aa12.61□□□□□ -0.39
TMF1-203ENST00000488010 TMEM57Q8N5G2 664 aa12.6□□□□□ -0.39
TMF1-203ENST00000488010 DDX19BQ9UMR2 479 aa12.6□□□□□ -0.39
TMF1-203ENST00000488010 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
TMF1-203ENST00000488010 MRE11P49959 708 aa12.59□□□□□ -0.39
TMF1-203ENST00000488010 GRPEL1Q9HAV7 217 aa12.59□□□□□ -0.39
TMF1-203ENST00000488010 CCDC27Q2M243 656 aa12.59□□□□□ -0.39
TMF1-203ENST00000488010 ATF7IPQ6VMQ6 1270 aa12.59□□□□□ -0.39
TMF1-203ENST00000488010 IQSEC2Q5JU85 1478 aa12.59□□□□□ -0.39
TMF1-203ENST00000488010 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.39
TMF1-203ENST00000488010 GGNBP2Q9H3C7 697 aa12.58□□□□□ -0.39
TMF1-203ENST00000488010 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
TMF1-203ENST00000488010 SHPRHQ149N8 1683 aa12.58□□□□□ -0.4
TMF1-203ENST00000488010 ZFYVE16Q7Z3T8 1539 aa12.57□□□□□ -0.4
TMF1-203ENST00000488010 GGT6Q6P531 493 aa12.57□□□□□ -0.4
TMF1-203ENST00000488010 TRIM44Q96DX7 344 aaPredicted RBP12.57□□□□□ -0.4
TMF1-203ENST00000488010 ZNF518AQ6AHZ1 1483 aa12.57□□□□□ -0.4
TMF1-203ENST00000488010 TMPOP42166 694 aaKnown RBP12.56□□□□□ -0.4
TMF1-203ENST00000488010 HDAC1Q13547 482 aaPredicted RBP12.56□□□□□ -0.4
TMF1-203ENST00000488010 TNPO1Q92973 898 aaKnown RBP12.56□□□□□ -0.4
TMF1-203ENST00000488010 STK26Q9P289 416 aa12.56□□□□□ -0.4
TMF1-203ENST00000488010 ZMYM3Q14202 1370 aa12.56□□□□□ -0.4
TMF1-203ENST00000488010 CLCN1P35523 988 aa12.56□□□□□ -0.4
TMF1-203ENST00000488010 C1orf115Q9H7X2 142 aa12.56□□□□□ -0.4
TMF1-203ENST00000488010 TET3O43151 1660 aa12.56□□□□□ -0.4
TMF1-203ENST00000488010 RTEL1-TNFRSF6BF6WH68 1400 aa12.56□□□□□ -0.4
TMF1-203ENST00000488010 RIPK4P57078 832 aa12.56□□□□□ -0.4
TMF1-203ENST00000488010 SRPK2P78362 688 aaKnown RBP12.55□□□□□ -0.4
TMF1-203ENST00000488010 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
TMF1-203ENST00000488010 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
TMF1-203ENST00000488010 MYOM2P54296 1465 aa12.55□□□□□ -0.4
TMF1-203ENST00000488010 SMC5Q8IY18 1101 aa12.54□□□□□ -0.4
TMF1-203ENST00000488010 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
TMF1-203ENST00000488010 CHD1O14646 1710 aa12.54□□□□□ -0.4
TMF1-203ENST00000488010 GBP4Q96PP9 640 aa12.54□□□□□ -0.4
TMF1-203ENST00000488010 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
TMF1-203ENST00000488010 EVC2Q86UK5 1308 aa12.54□□□□□ -0.4
TMF1-203ENST00000488010 KIAA1210Q9ULL0 1709 aa12.54□□□□□ -0.4
TMF1-203ENST00000488010 ESPNB1AK53 854 aa12.53□□□□□ -0.4
TMF1-203ENST00000488010 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
TMF1-203ENST00000488010 SBNO2Q9Y2G9 1366 aa12.53□□□□□ -0.4
TMF1-203ENST00000488010 ZCCHC11Q5TAX3 1644 aaKnown RBP12.53□□□□□ -0.4
TMF1-203ENST00000488010 CHD1LQ86WJ1 897 aa12.53□□□□□ -0.4
TMF1-203ENST00000488010 ATP7AQ04656 1500 aa12.53□□□□□ -0.4
TMF1-203ENST00000488010 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
TMF1-203ENST00000488010 GAS2L3Q86XJ1 694 aa12.53□□□□□ -0.4
TMF1-203ENST00000488010 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
TMF1-203ENST00000488010 ZBTB40Q9NUA8 1239 aa12.53□□□□□ -0.4
TMF1-203ENST00000488010 ELL2O00472 640 aaPredicted RBP12.52□□□□□ -0.4
TMF1-203ENST00000488010 ERBB4Q15303 1308 aa12.52□□□□□ -0.4
TMF1-203ENST00000488010 CFAP65Q6ZU64 1925 aaKnown RBP12.52□□□□□ -0.4
TMF1-203ENST00000488010 HSP90AA2PQ14568 343 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms