RNA–Protein interactions for RNA: ENST00000487902.5

PDE6B-210, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-210ENST00000487902 L3MBTL2Q969R5 705 aa25.44■■□□□ 1.66
PDE6B-210ENST00000487902 C1orf167Q5SNV9 1468 aa25.44■■□□□ 1.66
PDE6B-210ENST00000487902 PRAM1Q96QH2 718 aa25.43■■□□□ 1.66
PDE6B-210ENST00000487902 TRAK1Q9UPV9 953 aa25.42■■□□□ 1.66
PDE6B-210ENST00000487902 PLEKHH1Q9ULM0 1364 aa25.41■■□□□ 1.66
PDE6B-210ENST00000487902 DISP3Q9P2K9 1392 aa25.4■■□□□ 1.66
PDE6B-210ENST00000487902 JCADQ9P266 1359 aa25.39■■□□□ 1.65
PDE6B-210ENST00000487902 TONSLQ96HA7 1378 aa25.38■■□□□ 1.65
PDE6B-210ENST00000487902 COL16A1Q07092 1604 aaPredicted RBP25.37■■□□□ 1.65
PDE6B-210ENST00000487902 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
PDE6B-210ENST00000487902 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
PDE6B-210ENST00000487902 EIF3AQ14152 1382 aaKnown RBP25.36■■□□□ 1.65
PDE6B-210ENST00000487902 MED1Q15648 1581 aaPredicted RBP25.35■■□□□ 1.65
PDE6B-210ENST00000487902 FMN2Q9NZ56 1722 aa25.35■■□□□ 1.65
PDE6B-210ENST00000487902 SAFB2Q14151 953 aaKnown RBP eCLIP25.34■■□□□ 1.65
PDE6B-210ENST00000487902 ESCO1Q5FWF5 840 aa25.34■■□□□ 1.65
PDE6B-210ENST00000487902 LRRC59Q96AG4 307 aaKnown RBP25.34■■□□□ 1.65
PDE6B-210ENST00000487902 ADGRB2O60241 1585 aa25.34■■□□□ 1.65
PDE6B-210ENST00000487902 ARHGEF28Q8N1W1 1705 aaKnown RBP25.33■■□□□ 1.65
PDE6B-210ENST00000487902 ORAI2Q96SN7 254 aa25.32■■□□□ 1.64
PDE6B-210ENST00000487902 SPATA31A6Q5VVP1 1343 aa25.31■■□□□ 1.64
PDE6B-210ENST00000487902 NPHP3Q7Z494 1330 aa25.31■■□□□ 1.64
PDE6B-210ENST00000487902 CLSPNQ9HAW4 1339 aa25.31■■□□□ 1.64
PDE6B-210ENST00000487902 PHF23Q9BUL5 403 aaPredicted RBP25.3■■□□□ 1.64
PDE6B-210ENST00000487902 KIF1AQ12756 1690 aa25.29■■□□□ 1.64
PDE6B-210ENST00000487902 SHPRHQ149N8 1683 aa25.29■■□□□ 1.64
PDE6B-210ENST00000487902 ANKARQ7Z5J8 1434 aa25.29■■□□□ 1.64
PDE6B-210ENST00000487902 TRPM1Q7Z4N2 1603 aa25.28■■□□□ 1.64
PDE6B-210ENST00000487902 NBPF1Q3BBV0 1214 aa25.28■■□□□ 1.64
PDE6B-210ENST00000487902 NUTM2FA1L443 756 aa25.27■■□□□ 1.64
PDE6B-210ENST00000487902 MINK1Q8N4C8 1332 aaPredicted RBP25.27■■□□□ 1.64
PDE6B-210ENST00000487902 ROCK2O75116 1388 aaKnown RBP25.26■■□□□ 1.63
PDE6B-210ENST00000487902 SOS2Q07890 1332 aaPredicted RBP25.25■■□□□ 1.63
PDE6B-210ENST00000487902 WASLO00401 505 aaPredicted RBP25.24■■□□□ 1.63
PDE6B-210ENST00000487902 HIRIP3Q9BW71 556 aaPredicted RBP25.23■■□□□ 1.63
PDE6B-210ENST00000487902 CENPJQ9HC77 1338 aaPredicted RBP25.22■■□□□ 1.63
PDE6B-210ENST00000487902 TULP4Q9NRJ4 1543 aa25.22■■□□□ 1.63
PDE6B-210ENST00000487902 FOXO3O43524 673 aa25.21■■□□□ 1.63
PDE6B-210ENST00000487902 TIMELESSQ9UNS1 1208 aa25.21■■□□□ 1.63
PDE6B-210ENST00000487902 PHF8Q9UPP1 1060 aa25.21■■□□□ 1.63
PDE6B-210ENST00000487902 DDX17Q92841 729 aaKnown RBP25.2■■□□□ 1.62
PDE6B-210ENST00000487902 RGPD8O14715 1765 aaPredicted RBP25.19■■□□□ 1.62
PDE6B-210ENST00000487902 PSME1Q06323 249 aa25.18■■□□□ 1.62
PDE6B-210ENST00000487902 GPRASP1Q5JY77 1395 aa25.18■■□□□ 1.62
PDE6B-210ENST00000487902 MEX3CQ5U5Q3 659 aaKnown RBP25.17■■□□□ 1.62
PDE6B-210ENST00000487902 PNPLA6Q8IY17 1366 aa25.17■■□□□ 1.62
PDE6B-210ENST00000487902 ITSN1Q15811 1721 aa25.16■■□□□ 1.62
PDE6B-210ENST00000487902 PXDNQ92626 1479 aa25.15■■□□□ 1.62
PDE6B-210ENST00000487902 NBPF8Q3BBV2 869 aa25.15■■□□□ 1.62
PDE6B-210ENST00000487902 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
PDE6B-210ENST00000487902 RALGAPBQ86X10 1494 aa25.15■■□□□ 1.62
PDE6B-210ENST00000487902 CARD11Q9BXL7 1154 aa25.14■■□□□ 1.62
PDE6B-210ENST00000487902 QRICH2Q9H0J4 1663 aa25.13■■□□□ 1.61
PDE6B-210ENST00000487902 CDK19Q9BWU1 502 aa25.13■■□□□ 1.61
PDE6B-210ENST00000487902 KRT28Q7Z3Y7 464 aa25.12■■□□□ 1.61
PDE6B-210ENST00000487902 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
PDE6B-210ENST00000487902 NUDT16Q96DE0 195 aaKnown RBP25.11■■□□□ 1.61
PDE6B-210ENST00000487902 NUTM2BA6NNL0 878 aaPredicted RBP25.1■■□□□ 1.61
PDE6B-210ENST00000487902 NUTM2EB1AL46 878 aaPredicted RBP25.1■■□□□ 1.61
PDE6B-210ENST00000487902 NUTM2AQ8IVF1 878 aaPredicted RBP25.1■■□□□ 1.61
PDE6B-210ENST00000487902 COL22A1Q8NFW1 1626 aaPredicted RBP25.09■■□□□ 1.61
PDE6B-210ENST00000487902 XPCQ01831 940 aaPredicted RBP25.09■■□□□ 1.61
PDE6B-210ENST00000487902 PMFBP1Q8TBY8 1022 aa25.09■■□□□ 1.61
PDE6B-210ENST00000487902 CCDC61Q9Y6R9 512 aa25.09■■□□□ 1.61
PDE6B-210ENST00000487902 EVC2Q86UK5 1308 aa25.09■■□□□ 1.61
PDE6B-210ENST00000487902 PRR36Q9H6K5 1346 aa25.09■■□□□ 1.61
PDE6B-210ENST00000487902 ATP7BP35670 1465 aa25.09■■□□□ 1.61
PDE6B-210ENST00000487902 SBNO1A3KN83 1393 aa25.08■■□□□ 1.61
PDE6B-210ENST00000487902 SRPK2P78362 688 aaKnown RBP25.08■■□□□ 1.61
PDE6B-210ENST00000487902 NGDNQ8NEJ9 315 aaKnown RBP25.08■■□□□ 1.61
PDE6B-210ENST00000487902 SPATA31A3Q5VYP0 1347 aa25.08■■□□□ 1.6
PDE6B-210ENST00000487902 LRP6O75581 1613 aa25.08■■□□□ 1.6
PDE6B-210ENST00000487902 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
PDE6B-210ENST00000487902 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
PDE6B-210ENST00000487902 ZNF772Q68DY9 489 aaPredicted RBP25.05■■□□□ 1.6
PDE6B-210ENST00000487902 TNS3Q68CZ2 1445 aa25.04■■□□□ 1.6
PDE6B-210ENST00000487902 SBNO2Q9Y2G9 1366 aa25.04■■□□□ 1.6
PDE6B-210ENST00000487902 TOPAZ1Q8N9V7 1692 aa25.02■■□□□ 1.6
PDE6B-210ENST00000487902 PLEKHG3A1L390 1219 aa25■■□□□ 1.59
PDE6B-210ENST00000487902 ILDR2Q71H61 639 aa24.99■■□□□ 1.59
PDE6B-210ENST00000487902 RGS17Q9UGC6 210 aaPredicted RBP24.99■■□□□ 1.59
PDE6B-210ENST00000487902 POLR3AO14802 1390 aaPredicted RBP24.98■■□□□ 1.59
PDE6B-210ENST00000487902 HAP1P54257 671 aaPredicted RBP24.98■■□□□ 1.59
PDE6B-210ENST00000487902 LMOD2Q6P5Q4 547 aa24.98■■□□□ 1.59
PDE6B-210ENST00000487902 CABP2Q9NPB3 220 aa24.98■■□□□ 1.59
PDE6B-210ENST00000487902 PPIP5K1Q6PFW1 1433 aa24.97■■□□□ 1.59
PDE6B-210ENST00000487902 ADAMTS2O95450 1211 aa24.97■■□□□ 1.59
PDE6B-210ENST00000487902 C8orf37Q96NL8 207 aa24.97■■□□□ 1.59
PDE6B-210ENST00000487902 NGLY1Q96IV0 654 aa24.96■■□□□ 1.59
PDE6B-210ENST00000487902 TRPM3Q9HCF6 1732 aaPredicted RBP24.95■■□□□ 1.59
PDE6B-210ENST00000487902 BRD4O60885 1362 aaPredicted RBP24.95■■□□□ 1.59
PDE6B-210ENST00000487902 ATAD2Q6PL18 1390 aa24.95■■□□□ 1.59
PDE6B-210ENST00000487902 ACEP12821 1306 aa24.95■■□□□ 1.58
PDE6B-210ENST00000487902 AFF2P51816 1311 aa24.94■■□□□ 1.58
PDE6B-210ENST00000487902 PAK3O75914 559 aaPredicted RBP24.94■■□□□ 1.58
PDE6B-210ENST00000487902 MARF1Q9Y4F3 1742 aaKnown RBP24.93■■□□□ 1.58
PDE6B-210ENST00000487902 ALS2Q96Q42 1657 aa24.91■■□□□ 1.58
PDE6B-210ENST00000487902 POTEAQ6S8J7 498 aa24.9■■□□□ 1.58
PDE6B-210ENST00000487902 PUS7Q96PZ0 661 aaKnown RBP24.9■■□□□ 1.58
PDE6B-210ENST00000487902 CABP1Q9NZU7 370 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms