RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 SIN3AQ96ST3 1273 aa13.42□□□□□ -0.26
LCN2-205ENST00000487719 NHSL1Q5SYE7 1610 aa13.42□□□□□ -0.26
LCN2-205ENST00000487719 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
LCN2-205ENST00000487719 RGPD8O14715 1765 aaPredicted RBP13.41□□□□□ -0.26
LCN2-205ENST00000487719 TRPM1Q7Z4N2 1603 aa13.41□□□□□ -0.26
LCN2-205ENST00000487719 KIF1AQ12756 1690 aa13.4□□□□□ -0.26
LCN2-205ENST00000487719 ITSN1Q15811 1721 aa13.4□□□□□ -0.26
LCN2-205ENST00000487719 WAPLQ7Z5K2 1190 aa13.4□□□□□ -0.26
LCN2-205ENST00000487719 L3MBTL2Q969R5 705 aa13.4□□□□□ -0.26
LCN2-205ENST00000487719 TRAK1Q9UPV9 953 aa13.4□□□□□ -0.26
LCN2-205ENST00000487719 EIF3AQ14152 1382 aaKnown RBP13.4□□□□□ -0.26
LCN2-205ENST00000487719 PRAM1Q96QH2 718 aa13.39□□□□□ -0.27
LCN2-205ENST00000487719 ADGRB2O60241 1585 aa13.39□□□□□ -0.27
LCN2-205ENST00000487719 COL16A1Q07092 1604 aaPredicted RBP13.39□□□□□ -0.27
LCN2-205ENST00000487719 C1orf167Q5SNV9 1468 aa13.38□□□□□ -0.27
LCN2-205ENST00000487719 SAFB2Q14151 953 aaKnown RBP eCLIP13.38□□□□□ -0.27
LCN2-205ENST00000487719 SHPRHQ149N8 1683 aa13.37□□□□□ -0.27
LCN2-205ENST00000487719 BRINP3Q76B58 766 aa13.37□□□□□ -0.27
LCN2-205ENST00000487719 QRICH2Q9H0J4 1663 aa13.37□□□□□ -0.27
LCN2-205ENST00000487719 CLSPNQ9HAW4 1339 aa13.37□□□□□ -0.27
LCN2-205ENST00000487719 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
LCN2-205ENST00000487719 JCADQ9P266 1359 aa13.36□□□□□ -0.27
LCN2-205ENST00000487719 PLEKHH1Q9ULM0 1364 aa13.36□□□□□ -0.27
LCN2-205ENST00000487719 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
LCN2-205ENST00000487719 DISP3Q9P2K9 1392 aa13.35□□□□□ -0.27
LCN2-205ENST00000487719 ESCO1Q5FWF5 840 aa13.35□□□□□ -0.27
LCN2-205ENST00000487719 PHF23Q9BUL5 403 aaPredicted RBP13.35□□□□□ -0.27
LCN2-205ENST00000487719 NPHP3Q7Z494 1330 aa13.34□□□□□ -0.27
LCN2-205ENST00000487719 MINK1Q8N4C8 1332 aaPredicted RBP13.33□□□□□ -0.28
LCN2-205ENST00000487719 ANKARQ7Z5J8 1434 aa13.32□□□□□ -0.28
LCN2-205ENST00000487719 NUTM2FA1L443 756 aa13.32□□□□□ -0.28
LCN2-205ENST00000487719 CCER1Q8TC90 406 aaPredicted RBP13.32□□□□□ -0.28
LCN2-205ENST00000487719 LRRC59Q96AG4 307 aaKnown RBP13.32□□□□□ -0.28
LCN2-205ENST00000487719 TULP4Q9NRJ4 1543 aa13.31□□□□□ -0.28
LCN2-205ENST00000487719 CENPJQ9HC77 1338 aaPredicted RBP13.31□□□□□ -0.28
LCN2-205ENST00000487719 NBPF1Q3BBV0 1214 aa13.3□□□□□ -0.28
LCN2-205ENST00000487719 ORAI2Q96SN7 254 aa13.3□□□□□ -0.28
LCN2-205ENST00000487719 HIRIP3Q9BW71 556 aaPredicted RBP13.3□□□□□ -0.28
LCN2-205ENST00000487719 SPATA31A6Q5VVP1 1343 aa13.3□□□□□ -0.28
LCN2-205ENST00000487719 RALGAPBQ86X10 1494 aa13.29□□□□□ -0.28
LCN2-205ENST00000487719 MEX3CQ5U5Q3 659 aaKnown RBP13.29□□□□□ -0.28
LCN2-205ENST00000487719 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
LCN2-205ENST00000487719 USP32Q8NFA0 1604 aa13.28□□□□□ -0.28
LCN2-205ENST00000487719 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
LCN2-205ENST00000487719 CARD11Q9BXL7 1154 aa13.28□□□□□ -0.28
LCN2-205ENST00000487719 PHF8Q9UPP1 1060 aa13.28□□□□□ -0.28
LCN2-205ENST00000487719 PSME1Q06323 249 aa13.27□□□□□ -0.29
LCN2-205ENST00000487719 FOXO3O43524 673 aa13.26□□□□□ -0.29
LCN2-205ENST00000487719 SOS2Q07890 1332 aaPredicted RBP13.26□□□□□ -0.29
LCN2-205ENST00000487719 MARF1Q9Y4F3 1742 aaKnown RBP13.26□□□□□ -0.29
LCN2-205ENST00000487719 TOPAZ1Q8N9V7 1692 aa13.25□□□□□ -0.29
LCN2-205ENST00000487719 COL22A1Q8NFW1 1626 aaPredicted RBP13.25□□□□□ -0.29
LCN2-205ENST00000487719 GPRASP1Q5JY77 1395 aa13.25□□□□□ -0.29
LCN2-205ENST00000487719 SRPK2P78362 688 aaKnown RBP13.25□□□□□ -0.29
LCN2-205ENST00000487719 PXDNQ92626 1479 aa13.24□□□□□ -0.29
LCN2-205ENST00000487719 EVC2Q86UK5 1308 aa13.24□□□□□ -0.29
LCN2-205ENST00000487719 DDX17Q92841 729 aaKnown RBP13.24□□□□□ -0.29
LCN2-205ENST00000487719 PNPLA6Q8IY17 1366 aa13.23□□□□□ -0.29
LCN2-205ENST00000487719 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
LCN2-205ENST00000487719 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
LCN2-205ENST00000487719 NBPF8Q3BBV2 869 aa13.23□□□□□ -0.29
LCN2-205ENST00000487719 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
LCN2-205ENST00000487719 NGDNQ8NEJ9 315 aaKnown RBP13.23□□□□□ -0.29
LCN2-205ENST00000487719 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
LCN2-205ENST00000487719 ATP7BP35670 1465 aa13.23□□□□□ -0.29
LCN2-205ENST00000487719 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
LCN2-205ENST00000487719 KRT28Q7Z3Y7 464 aa13.22□□□□□ -0.29
LCN2-205ENST00000487719 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
LCN2-205ENST00000487719 ARHGEF10O15013 1369 aa13.21□□□□□ -0.29
LCN2-205ENST00000487719 HAP1P54257 671 aaPredicted RBP13.21□□□□□ -0.29
LCN2-205ENST00000487719 XPCQ01831 940 aaPredicted RBP13.21□□□□□ -0.29
LCN2-205ENST00000487719 PMFBP1Q8TBY8 1022 aa13.21□□□□□ -0.29
LCN2-205ENST00000487719 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
LCN2-205ENST00000487719 TNS3Q68CZ2 1445 aa13.21□□□□□ -0.3
LCN2-205ENST00000487719 TRPM3Q9HCF6 1732 aaPredicted RBP13.2□□□□□ -0.3
LCN2-205ENST00000487719 LMOD2Q6P5Q4 547 aa13.2□□□□□ -0.3
LCN2-205ENST00000487719 SBNO1A3KN83 1393 aa13.2□□□□□ -0.3
LCN2-205ENST00000487719 SBNO2Q9Y2G9 1366 aa13.19□□□□□ -0.3
LCN2-205ENST00000487719 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
LCN2-205ENST00000487719 SPATA31A3Q5VYP0 1347 aa13.18□□□□□ -0.3
LCN2-205ENST00000487719 PRR36Q9H6K5 1346 aa13.18□□□□□ -0.3
LCN2-205ENST00000487719 LRP6O75581 1613 aa13.18□□□□□ -0.3
LCN2-205ENST00000487719 PPIP5K1Q6PFW1 1433 aa13.18□□□□□ -0.3
LCN2-205ENST00000487719 ABCA3Q99758 1704 aa13.18□□□□□ -0.3
LCN2-205ENST00000487719 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
LCN2-205ENST00000487719 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
LCN2-205ENST00000487719 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
LCN2-205ENST00000487719 ZNF772Q68DY9 489 aaPredicted RBP13.17□□□□□ -0.3
LCN2-205ENST00000487719 CABP2Q9NPB3 220 aa13.16□□□□□ -0.3
LCN2-205ENST00000487719 ADAMTS2O95450 1211 aa13.15□□□□□ -0.3
LCN2-205ENST00000487719 C8orf37Q96NL8 207 aa13.15□□□□□ -0.3
LCN2-205ENST00000487719 POLR3AO14802 1390 aaPredicted RBP13.15□□□□□ -0.3
LCN2-205ENST00000487719 ACEP12821 1306 aa13.14□□□□□ -0.31
LCN2-205ENST00000487719 PLEKHG3A1L390 1219 aa13.14□□□□□ -0.31
LCN2-205ENST00000487719 NGLY1Q96IV0 654 aa13.14□□□□□ -0.31
LCN2-205ENST00000487719 BRD4O60885 1362 aaPredicted RBP13.14□□□□□ -0.31
LCN2-205ENST00000487719 USP47Q96K76 1375 aa13.14□□□□□ -0.31
LCN2-205ENST00000487719 NWD2Q9ULI1 1742 aa13.13□□□□□ -0.31
LCN2-205ENST00000487719 AFF2P51816 1311 aa13.13□□□□□ -0.31
LCN2-205ENST00000487719 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms