RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 ROBO2Q9HCK4 1378 aa25.3■■□□□ 1.64
TOM1-214ENST00000487670 ROCK1Q13464 1354 aa25.27■■□□□ 1.64
TOM1-214ENST00000487670 PXDNQ92626 1479 aa25.26■■□□□ 1.63
TOM1-214ENST00000487670 PPLO60437 1756 aa25.24■■□□□ 1.63
TOM1-214ENST00000487670 LRP5O75197 1615 aa25.23■■□□□ 1.63
TOM1-214ENST00000487670 CDC42BPGQ6DT37 1551 aa25.19■■□□□ 1.62
TOM1-214ENST00000487670 RGPD8O14715 1765 aaPredicted RBP25.19■■□□□ 1.62
TOM1-214ENST00000487670 XPCQ01831 940 aaPredicted RBP25.19■■□□□ 1.62
TOM1-214ENST00000487670 PLCH1Q4KWH8 1693 aa25.17■■□□□ 1.62
TOM1-214ENST00000487670 RALGAPBQ86X10 1494 aa25.17■■□□□ 1.62
TOM1-214ENST00000487670 DEFB132Q7Z7B7 95 aa25.17■■□□□ 1.62
TOM1-214ENST00000487670 ITGAEP38570 1179 aa25.16■■□□□ 1.62
TOM1-214ENST00000487670 PRAG1Q86YV5 1406 aa25.16■■□□□ 1.62
TOM1-214ENST00000487670 ABCA3Q99758 1704 aa25.16■■□□□ 1.62
TOM1-214ENST00000487670 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
TOM1-214ENST00000487670 GJD4Q96KN9 370 aaPredicted RBP25.14■■□□□ 1.62
TOM1-214ENST00000487670 BLMP54132 1417 aaPredicted RBP25.12■■□□□ 1.61
TOM1-214ENST00000487670 SLIT2O94813 1529 aa25.12■■□□□ 1.61
TOM1-214ENST00000487670 FMN2Q9NZ56 1722 aa25.12■■□□□ 1.61
TOM1-214ENST00000487670 CCDC125Q86Z20 511 aa25.1■■□□□ 1.61
TOM1-214ENST00000487670 HFM1A2PYH4 1435 aa25.09■■□□□ 1.61
TOM1-214ENST00000487670 ESCO1Q5FWF5 840 aa25.08■■□□□ 1.61
TOM1-214ENST00000487670 IFT172Q9UG01 1749 aa25.07■■□□□ 1.6
TOM1-214ENST00000487670 FOXO3O43524 673 aa25.07■■□□□ 1.6
TOM1-214ENST00000487670 NPHP3Q7Z494 1330 aa25.07■■□□□ 1.6
TOM1-214ENST00000487670 NWD2Q9ULI1 1742 aa25.06■■□□□ 1.6
TOM1-214ENST00000487670 NUTM2FA1L443 756 aa25.06■■□□□ 1.6
TOM1-214ENST00000487670 FOXD1Q16676 465 aa25.06■■□□□ 1.6
TOM1-214ENST00000487670 KNDC1Q76NI1 1749 aa25.06■■□□□ 1.6
TOM1-214ENST00000487670 NAIPQ13075 1403 aa25.05■■□□□ 1.6
TOM1-214ENST00000487670 KIF1AQ12756 1690 aa25.04■■□□□ 1.6
TOM1-214ENST00000487670 NRAPQ86VF7 1730 aa25.03■■□□□ 1.6
TOM1-214ENST00000487670 UNC5CLQ8IV45 518 aa25.02■■□□□ 1.6
TOM1-214ENST00000487670 PSDA5PKW4 1024 aaPredicted RBP25.01■■□□□ 1.59
TOM1-214ENST00000487670 PLEKHH1Q9ULM0 1364 aa24.99■■□□□ 1.59
TOM1-214ENST00000487670 SEPT12Q8IYM1 358 aa24.98■■□□□ 1.59
TOM1-214ENST00000487670 TNS1Q9HBL0 1735 aaKnown RBP24.98■■□□□ 1.59
TOM1-214ENST00000487670 WAPLQ7Z5K2 1190 aa24.97■■□□□ 1.59
TOM1-214ENST00000487670 SPATA31A3Q5VYP0 1347 aa24.96■■□□□ 1.59
TOM1-214ENST00000487670 RGPD1P0DJD0 1748 aa24.96■■□□□ 1.59
TOM1-214ENST00000487670 VGFO15240 615 aaPredicted RBP24.96■■□□□ 1.59
TOM1-214ENST00000487670 PPARGC1BQ86YN6 1023 aaKnown RBP24.96■■□□□ 1.59
TOM1-214ENST00000487670 PLEKHG5O94827 1062 aa24.95■■□□□ 1.58
TOM1-214ENST00000487670 CABLES1Q8TDN4 633 aa24.93■■□□□ 1.58
TOM1-214ENST00000487670 TECPR2O15040 1411 aa24.92■■□□□ 1.58
TOM1-214ENST00000487670 HRCP23327 699 aa24.91■■□□□ 1.58
TOM1-214ENST00000487670 STK26Q9P289 416 aa24.91■■□□□ 1.58
TOM1-214ENST00000487670 ADGRF5Q8IZF2 1346 aa24.9■■□□□ 1.58
TOM1-214ENST00000487670 CCDC144AA2RUR9 1427 aa24.88■■□□□ 1.57
TOM1-214ENST00000487670 TNS3Q68CZ2 1445 aa24.88■■□□□ 1.57
TOM1-214ENST00000487670 SF3B2Q13435 895 aaKnown RBP24.88■■□□□ 1.57
TOM1-214ENST00000487670 VPS72Q15906 364 aa24.88■■□□□ 1.57
TOM1-214ENST00000487670 TRPM3Q9HCF6 1732 aaPredicted RBP24.88■■□□□ 1.57
TOM1-214ENST00000487670 LRPPRCP42704 1394 aaKnown RBP24.88■■□□□ 1.57
TOM1-214ENST00000487670 KRT27Q7Z3Y8 459 aa24.87■■□□□ 1.57
TOM1-214ENST00000487670 RRBP1Q9P2E9 1410 aaKnown RBP24.86■■□□□ 1.57
TOM1-214ENST00000487670 CRYBG1Q9Y4K1 1723 aa24.86■■□□□ 1.57
TOM1-214ENST00000487670 RPGRIP1LQ68CZ1 1315 aa24.86■■□□□ 1.57
TOM1-214ENST00000487670 TMEM132EQ6IEE7 984 aa24.85■■□□□ 1.57
TOM1-214ENST00000487670 KRT28Q7Z3Y7 464 aa24.85■■□□□ 1.57
TOM1-214ENST00000487670 CCDC9Q9Y3X0 531 aaKnown RBP24.85■■□□□ 1.57
TOM1-214ENST00000487670 FAM182BQ5T319 152 aa24.84■■□□□ 1.57
TOM1-214ENST00000487670 ALS2Q96Q42 1657 aa24.83■■□□□ 1.57
TOM1-214ENST00000487670 ONECUT3O60422 494 aaPredicted RBP24.83■■□□□ 1.57
TOM1-214ENST00000487670 THSD7AQ9UPZ6 1657 aa24.82■■□□□ 1.56
TOM1-214ENST00000487670 EN1Q05925 392 aaPredicted RBP24.81■■□□□ 1.56
TOM1-214ENST00000487670 NRXN1Q9ULB1 1477 aa24.8■■□□□ 1.56
TOM1-214ENST00000487670 COL14A1Q05707 1796 aaKnown RBP24.8■■□□□ 1.56
TOM1-214ENST00000487670 BAG6P46379 1132 aa24.78■■□□□ 1.56
TOM1-214ENST00000487670 HAP1P54257 671 aaPredicted RBP24.78■■□□□ 1.56
TOM1-214ENST00000487670 R3HDM1Q15032 1099 aaKnown RBP24.78■■□□□ 1.56
TOM1-214ENST00000487670 FAM98CQ17RN3 349 aaKnown RBP24.78■■□□□ 1.56
TOM1-214ENST00000487670 ABCC11Q96J66 1382 aa24.78■■□□□ 1.56
TOM1-214ENST00000487670 YTHDC2Q9H6S0 1430 aaKnown RBP24.78■■□□□ 1.56
TOM1-214ENST00000487670 A0A0G2JS52 829 aa24.77■■□□□ 1.56
TOM1-214ENST00000487670 FAM83GA6ND36 823 aa24.77■■□□□ 1.56
TOM1-214ENST00000487670 MYT1Q01538 1121 aa24.77■■□□□ 1.56
TOM1-214ENST00000487670 RREB1Q92766 1687 aa24.77■■□□□ 1.56
TOM1-214ENST00000487670 PIK3C2GO75747 1445 aa24.77■■□□□ 1.56
TOM1-214ENST00000487670 SPATA31E1Q6ZUB1 1445 aa24.77■■□□□ 1.56
TOM1-214ENST00000487670 NUP188Q5SRE5 1749 aa24.76■■□□□ 1.55
TOM1-214ENST00000487670 PHF8Q9UPP1 1060 aa24.75■■□□□ 1.55
TOM1-214ENST00000487670 RGL3Q3MIN7 710 aa24.73■■□□□ 1.55
TOM1-214ENST00000487670 LMOD2Q6P5Q4 547 aa24.73■■□□□ 1.55
TOM1-214ENST00000487670 ADGRB2O60241 1585 aa24.72■■□□□ 1.55
TOM1-214ENST00000487670 SBNO1A3KN83 1393 aa24.72■■□□□ 1.55
TOM1-214ENST00000487670 SLC4A1APQ9BWU0 796 aaKnown RBP24.72■■□□□ 1.55
TOM1-214ENST00000487670 DISP2A7MBM2 1401 aa24.69■■□□□ 1.54
TOM1-214ENST00000487670 EZH2Q15910 746 aaKnown RBP24.69■■□□□ 1.54
TOM1-214ENST00000487670 BTG4Q9NY30 223 aa24.69■■□□□ 1.54
TOM1-214ENST00000487670 ARHGEF10O15013 1369 aa24.67■■□□□ 1.54
TOM1-214ENST00000487670 CAMTA1Q9Y6Y1 1673 aa24.67■■□□□ 1.54
TOM1-214ENST00000487670 SAFB2Q14151 953 aaKnown RBP eCLIP24.67■■□□□ 1.54
TOM1-214ENST00000487670 PMFBP1Q8TBY8 1022 aa24.67■■□□□ 1.54
TOM1-214ENST00000487670 PHRF1Q9P1Y6 1649 aaKnown RBP24.66■■□□□ 1.54
TOM1-214ENST00000487670 PSME1Q06323 249 aa24.65■■□□□ 1.54
TOM1-214ENST00000487670 ANKRD30BQ9BXX2 1392 aa24.64■■□□□ 1.53
TOM1-214ENST00000487670 SPATA31A5Q5VU36 1347 aa24.62■■□□□ 1.53
TOM1-214ENST00000487670 SPATA31A7Q8IWB4 1347 aa24.62■■□□□ 1.53
TOM1-214ENST00000487670 CAMKK2Q96RR4 588 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms