RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 WAPLQ7Z5K2 1190 aa36.66■■■■□ 3.46
SEMA3C-209ENST00000487621 C14orf93Q9H972 538 aaKnown RBP36.66■■■■□ 3.46
SEMA3C-209ENST00000487621 KNDC1Q76NI1 1749 aa36.65■■■■□ 3.46
SEMA3C-209ENST00000487621 MEX3CQ5U5Q3 659 aaKnown RBP36.65■■■■□ 3.46
SEMA3C-209ENST00000487621 PNPLA6Q8IY17 1366 aa36.65■■■■□ 3.46
SEMA3C-209ENST00000487621 YTHDC2Q9H6S0 1430 aaKnown RBP36.64■■■■□ 3.46
SEMA3C-209ENST00000487621 PLEKHH1Q9ULM0 1364 aa36.64■■■■□ 3.46
SEMA3C-209ENST00000487621 SOS2Q07890 1332 aaPredicted RBP36.63■■■■□ 3.45
SEMA3C-209ENST00000487621 NUTM2BA6NNL0 878 aaPredicted RBP36.61■■■■□ 3.45
SEMA3C-209ENST00000487621 NUTM2EB1AL46 878 aaPredicted RBP36.61■■■■□ 3.45
SEMA3C-209ENST00000487621 NUTM2AQ8IVF1 878 aaPredicted RBP36.61■■■■□ 3.45
SEMA3C-209ENST00000487621 CFAP70Q5T0N1 1121 aa36.59■■■■□ 3.45
SEMA3C-209ENST00000487621 ZNF772Q68DY9 489 aaPredicted RBP36.58■■■■□ 3.45
SEMA3C-209ENST00000487621 SIRT1Q96EB6 747 aa36.58■■■■□ 3.45
SEMA3C-209ENST00000487621 ESCO1Q5FWF5 840 aa36.52■■■■□ 3.44
SEMA3C-209ENST00000487621 DHX57Q6P158 1386 aaKnown RBP36.51■■■■□ 3.43
SEMA3C-209ENST00000487621 AFF2P51816 1311 aa36.47■■■■□ 3.43
SEMA3C-209ENST00000487621 NPHP3Q7Z494 1330 aa36.47■■■■□ 3.43
SEMA3C-209ENST00000487621 PXDNQ92626 1479 aa36.47■■■■□ 3.43
SEMA3C-209ENST00000487621 NUTM2FA1L443 756 aa36.46■■■■□ 3.43
SEMA3C-209ENST00000487621 FMN2Q9NZ56 1722 aa36.45■■■■□ 3.43
SEMA3C-209ENST00000487621 ADGRB1O14514 1584 aa36.44■■■■□ 3.42
SEMA3C-209ENST00000487621 FOXO3O43524 673 aa36.42■■■■□ 3.42
SEMA3C-209ENST00000487621 DLC1Q96QB1 1528 aa36.41■■■■□ 3.42
SEMA3C-209ENST00000487621 C8orf37Q96NL8 207 aa36.41■■■■□ 3.42
SEMA3C-209ENST00000487621 COL22A1Q8NFW1 1626 aaPredicted RBP36.41■■■■□ 3.42
SEMA3C-209ENST00000487621 PRAM1Q96QH2 718 aa36.4■■■■□ 3.42
SEMA3C-209ENST00000487621 DCAF11Q8TEB1 546 aa36.39■■■■□ 3.42
SEMA3C-209ENST00000487621 RXRBP28702 533 aa36.37■■■■□ 3.41
SEMA3C-209ENST00000487621 STAC3Q96MF2 364 aa36.37■■■■□ 3.41
SEMA3C-209ENST00000487621 KDM2AQ9Y2K7 1162 aa36.37■■■■□ 3.41
SEMA3C-209ENST00000487621 ADAMTS2O95450 1211 aa36.36■■■■□ 3.41
SEMA3C-209ENST00000487621 XPCQ01831 940 aaPredicted RBP36.36■■■■□ 3.41
SEMA3C-209ENST00000487621 CDK12Q9NYV4 1490 aaPredicted RBP36.33■■■■□ 3.41
SEMA3C-209ENST00000487621 SAFB2Q14151 953 aaKnown RBP eCLIP36.32■■■■□ 3.4
SEMA3C-209ENST00000487621 KIF1AQ12756 1690 aa36.31■■■■□ 3.4
SEMA3C-209ENST00000487621 NGLY1Q96IV0 654 aa36.3■■■■□ 3.4
SEMA3C-209ENST00000487621 QTRT2Q9H974 415 aaKnown RBP36.29■■■■□ 3.4
SEMA3C-209ENST00000487621 POGKQ9P215 609 aa36.28■■■■□ 3.4
SEMA3C-209ENST00000487621 TRAK1Q9UPV9 953 aa36.28■■■■□ 3.4
SEMA3C-209ENST00000487621 ADGRB2O60241 1585 aa36.27■■■■□ 3.4
SEMA3C-209ENST00000487621 FNBP4Q8N3X1 1017 aaPredicted RBP36.26■■■■□ 3.4
SEMA3C-209ENST00000487621 PHF8Q9UPP1 1060 aa36.25■■■■□ 3.39
SEMA3C-209ENST00000487621 SPATA31A3Q5VYP0 1347 aa36.25■■■■□ 3.39
SEMA3C-209ENST00000487621 RBM6P78332 1123 aaKnown RBP36.24■■■■□ 3.39
SEMA3C-209ENST00000487621 RGPD8O14715 1765 aaPredicted RBP36.24■■■■□ 3.39
SEMA3C-209ENST00000487621 KRT28Q7Z3Y7 464 aa36.23■■■■□ 3.39
SEMA3C-209ENST00000487621 ANKARQ7Z5J8 1434 aa36.22■■■■□ 3.39
SEMA3C-209ENST00000487621 USP32Q8NFA0 1604 aa36.22■■■■□ 3.39
SEMA3C-209ENST00000487621 RGS12O14924 1447 aa36.2■■■■□ 3.39
SEMA3C-209ENST00000487621 USP21Q9UK80 565 aa36.2■■■■□ 3.39
SEMA3C-209ENST00000487621 UPF1Q92900 1129 aaKnown RBP eCLIP36.17■■■■□ 3.38
SEMA3C-209ENST00000487621 HIRIP3Q9BW71 556 aaPredicted RBP36.17■■■■□ 3.38
SEMA3C-209ENST00000487621 ATRNO75882 1429 aa36.15■■■■□ 3.38
SEMA3C-209ENST00000487621 TNS3Q68CZ2 1445 aa36.15■■■■□ 3.38
SEMA3C-209ENST00000487621 MINK1Q8N4C8 1332 aaPredicted RBP36.14■■■■□ 3.38
SEMA3C-209ENST00000487621 PRR36Q9H6K5 1346 aa36.13■■■■□ 3.37
SEMA3C-209ENST00000487621 BCL9LQ86UU0 1499 aa36.13■■■■□ 3.37
SEMA3C-209ENST00000487621 TRPC5Q9UL62 973 aaPredicted RBP36.13■■■■□ 3.37
SEMA3C-209ENST00000487621 MARF1Q9Y4F3 1742 aaKnown RBP36.13■■■■□ 3.37
SEMA3C-209ENST00000487621 SBNO1A3KN83 1393 aa36.13■■■■□ 3.37
SEMA3C-209ENST00000487621 PSME1Q06323 249 aa36.12■■■■□ 3.37
SEMA3C-209ENST00000487621 TULP4Q9NRJ4 1543 aa36.1■■■■□ 3.37
SEMA3C-209ENST00000487621 WASLO00401 505 aaPredicted RBP36.1■■■■□ 3.37
SEMA3C-209ENST00000487621 PMFBP1Q8TBY8 1022 aa36.1■■■■□ 3.37
SEMA3C-209ENST00000487621 ARHGEF28Q8N1W1 1705 aaKnown RBP36.09■■■■□ 3.37
SEMA3C-209ENST00000487621 EIF3AQ14152 1382 aaKnown RBP36.07■■■■□ 3.36
SEMA3C-209ENST00000487621 KIAA1210Q9ULL0 1709 aa36.05■■■■□ 3.36
SEMA3C-209ENST00000487621 SLIT2O94813 1529 aa36.03■■■■□ 3.36
SEMA3C-209ENST00000487621 ARHGEF10O15013 1369 aa36.02■■■■□ 3.36
SEMA3C-209ENST00000487621 CABLES1Q8TDN4 633 aa36.01■■■■□ 3.36
SEMA3C-209ENST00000487621 NBPF1Q3BBV0 1214 aa36■■■■□ 3.35
SEMA3C-209ENST00000487621 TRPM3Q9HCF6 1732 aaPredicted RBP36■■■■□ 3.35
SEMA3C-209ENST00000487621 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.97■■■■□ 3.35
SEMA3C-209ENST00000487621 ATP7BP35670 1465 aa35.97■■■■□ 3.35
SEMA3C-209ENST00000487621 UNC5CLQ8IV45 518 aa35.96■■■■□ 3.35
SEMA3C-209ENST00000487621 ABCA3Q99758 1704 aa35.95■■■■□ 3.35
SEMA3C-209ENST00000487621 GJD4Q96KN9 370 aaPredicted RBP35.95■■■■□ 3.35
SEMA3C-209ENST00000487621 LMOD2Q6P5Q4 547 aa35.94■■■■□ 3.34
SEMA3C-209ENST00000487621 GPRASP1Q5JY77 1395 aa35.93■■■■□ 3.34
SEMA3C-209ENST00000487621 ALS2Q96Q42 1657 aa35.92■■■■□ 3.34
SEMA3C-209ENST00000487621 NUDT16Q96DE0 195 aaKnown RBP35.92■■■■□ 3.34
SEMA3C-209ENST00000487621 HAP1P54257 671 aaPredicted RBP35.9■■■■□ 3.34
SEMA3C-209ENST00000487621 L3MBTL2Q969R5 705 aa35.9■■■■□ 3.34
SEMA3C-209ENST00000487621 CDK19Q9BWU1 502 aa35.9■■■■□ 3.34
SEMA3C-209ENST00000487621 PLEKHG5O94827 1062 aa35.89■■■■□ 3.34
SEMA3C-209ENST00000487621 NGDNQ8NEJ9 315 aaKnown RBP35.88■■■■□ 3.33
SEMA3C-209ENST00000487621 SIN3AQ96ST3 1273 aa35.88■■■■□ 3.33
SEMA3C-209ENST00000487621 GLI3P10071 1580 aa35.88■■■■□ 3.33
SEMA3C-209ENST00000487621 RALGAPBQ86X10 1494 aa35.87■■■■□ 3.33
SEMA3C-209ENST00000487621 ATAD2Q6PL18 1390 aa35.86■■■■□ 3.33
SEMA3C-209ENST00000487621 ITSN1Q15811 1721 aa35.85■■■■□ 3.33
SEMA3C-209ENST00000487621 FAM83GA6ND36 823 aa35.84■■■■□ 3.33
SEMA3C-209ENST00000487621 PLCH1Q4KWH8 1693 aa35.83■■■■□ 3.33
SEMA3C-209ENST00000487621 NWD2Q9ULI1 1742 aa35.82■■■■□ 3.32
SEMA3C-209ENST00000487621 TOPAZ1Q8N9V7 1692 aa35.81■■■■□ 3.32
SEMA3C-209ENST00000487621 POLR3AO14802 1390 aaPredicted RBP35.81■■■■□ 3.32
SEMA3C-209ENST00000487621 VPS72Q15906 364 aa35.81■■■■□ 3.32
SEMA3C-209ENST00000487621 CCDC61Q9Y6R9 512 aa35.8■■■■□ 3.32
SEMA3C-209ENST00000487621 EP400Q96L91 3159 aa35.8■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms