RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 KIF1BO60333 1816 aa23.38■■□□□ 1.33
NME1-208ENST00000487481 BCL9LQ86UU0 1499 aa23.37■■□□□ 1.33
NME1-208ENST00000487481 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.35■■□□□ 1.33
NME1-208ENST00000487481 NPHP3Q7Z494 1330 aa23.34■■□□□ 1.33
NME1-208ENST00000487481 HFM1A2PYH4 1435 aa23.34■■□□□ 1.33
NME1-208ENST00000487481 CDC42BPGQ6DT37 1551 aa23.32■■□□□ 1.32
NME1-208ENST00000487481 PXDNQ92626 1479 aa23.32■■□□□ 1.32
NME1-208ENST00000487481 GJD4Q96KN9 370 aaPredicted RBP23.32■■□□□ 1.32
NME1-208ENST00000487481 BLMP54132 1417 aaPredicted RBP23.31■■□□□ 1.32
NME1-208ENST00000487481 VGFO15240 615 aaPredicted RBP23.29■■□□□ 1.32
NME1-208ENST00000487481 ESCO1Q5FWF5 840 aa23.27■■□□□ 1.32
NME1-208ENST00000487481 GLI3P10071 1580 aa23.27■■□□□ 1.32
NME1-208ENST00000487481 LRP5O75197 1615 aa23.26■■□□□ 1.31
NME1-208ENST00000487481 ITGAEP38570 1179 aa23.26■■□□□ 1.31
NME1-208ENST00000487481 RALGAPBQ86X10 1494 aa23.25■■□□□ 1.31
NME1-208ENST00000487481 LRPPRCP42704 1394 aaKnown RBP23.25■■□□□ 1.31
NME1-208ENST00000487481 SLIT2O94813 1529 aa23.24■■□□□ 1.31
NME1-208ENST00000487481 BRWD3Q6RI45 1802 aa23.24■■□□□ 1.31
NME1-208ENST00000487481 UNC5CLQ8IV45 518 aa23.23■■□□□ 1.31
NME1-208ENST00000487481 PPLO60437 1756 aa23.22■■□□□ 1.31
NME1-208ENST00000487481 FOXO3O43524 673 aa23.22■■□□□ 1.31
NME1-208ENST00000487481 XPCQ01831 940 aaPredicted RBP23.21■■□□□ 1.31
NME1-208ENST00000487481 RPGRIP1LQ68CZ1 1315 aa23.21■■□□□ 1.31
NME1-208ENST00000487481 USP32Q8NFA0 1604 aa23.2■■□□□ 1.3
NME1-208ENST00000487481 NAIPQ13075 1403 aa23.18■■□□□ 1.3
NME1-208ENST00000487481 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
NME1-208ENST00000487481 DEFB132Q7Z7B7 95 aa23.18■■□□□ 1.3
NME1-208ENST00000487481 KIF1AQ12756 1690 aa23.17■■□□□ 1.3
NME1-208ENST00000487481 CCDC144AA2RUR9 1427 aa23.15■■□□□ 1.3
NME1-208ENST00000487481 TECPR2O15040 1411 aa23.15■■□□□ 1.3
NME1-208ENST00000487481 SPATA31A3Q5VYP0 1347 aa23.14■■□□□ 1.3
NME1-208ENST00000487481 NWD2Q9ULI1 1742 aa23.13■■□□□ 1.29
NME1-208ENST00000487481 FMN2Q9NZ56 1722 aa23.13■■□□□ 1.29
NME1-208ENST00000487481 SEPT12Q8IYM1 358 aa23.12■■□□□ 1.29
NME1-208ENST00000487481 KNDC1Q76NI1 1749 aa23.11■■□□□ 1.29
NME1-208ENST00000487481 PLCH1Q4KWH8 1693 aa23.11■■□□□ 1.29
NME1-208ENST00000487481 NUTM2FA1L443 756 aa23.1■■□□□ 1.29
NME1-208ENST00000487481 VPS72Q15906 364 aa23.1■■□□□ 1.29
NME1-208ENST00000487481 ONECUT3O60422 494 aaPredicted RBP23.07■■□□□ 1.28
NME1-208ENST00000487481 KRT27Q7Z3Y8 459 aa23.07■■□□□ 1.28
NME1-208ENST00000487481 TNS3Q68CZ2 1445 aa23.07■■□□□ 1.28
NME1-208ENST00000487481 RRBP1Q9P2E9 1410 aaKnown RBP23.07■■□□□ 1.28
NME1-208ENST00000487481 ABCA3Q99758 1704 aa23.06■■□□□ 1.28
NME1-208ENST00000487481 HAP1P54257 671 aaPredicted RBP23.06■■□□□ 1.28
NME1-208ENST00000487481 WAPLQ7Z5K2 1190 aa23.06■■□□□ 1.28
NME1-208ENST00000487481 ABCC11Q96J66 1382 aa23.05■■□□□ 1.28
NME1-208ENST00000487481 BAG6P46379 1132 aa23.04■■□□□ 1.28
NME1-208ENST00000487481 KRT28Q7Z3Y7 464 aa23.04■■□□□ 1.28
NME1-208ENST00000487481 STK26Q9P289 416 aa23.04■■□□□ 1.28
NME1-208ENST00000487481 PLEKHH1Q9ULM0 1364 aa23.03■■□□□ 1.28
NME1-208ENST00000487481 IFT172Q9UG01 1749 aa23.03■■□□□ 1.28
NME1-208ENST00000487481 CCDC9Q9Y3X0 531 aaKnown RBP23.03■■□□□ 1.28
NME1-208ENST00000487481 ADGRF5Q8IZF2 1346 aa23.03■■□□□ 1.28
NME1-208ENST00000487481 HRCP23327 699 aa23.02■■□□□ 1.28
NME1-208ENST00000487481 PSDA5PKW4 1024 aaPredicted RBP23.01■■□□□ 1.27
NME1-208ENST00000487481 RGPD8O14715 1765 aaPredicted RBP23■■□□□ 1.27
NME1-208ENST00000487481 PSME1Q06323 249 aa23■■□□□ 1.27
NME1-208ENST00000487481 SLC4A1APQ9BWU0 796 aaKnown RBP23■■□□□ 1.27
NME1-208ENST00000487481 SBNO1A3KN83 1393 aa23■■□□□ 1.27
NME1-208ENST00000487481 RGPD1P0DJD0 1748 aa22.99■■□□□ 1.27
NME1-208ENST00000487481 ARHGEF10O15013 1369 aa22.99■■□□□ 1.27
NME1-208ENST00000487481 ANKRD30BQ9BXX2 1392 aa22.99■■□□□ 1.27
NME1-208ENST00000487481 NRAPQ86VF7 1730 aa22.99■■□□□ 1.27
NME1-208ENST00000487481 CABLES1Q8TDN4 633 aa22.98■■□□□ 1.27
NME1-208ENST00000487481 PHF8Q9UPP1 1060 aa22.97■■□□□ 1.27
NME1-208ENST00000487481 YTHDC2Q9H6S0 1430 aaKnown RBP22.97■■□□□ 1.27
NME1-208ENST00000487481 NRXN1Q9ULB1 1477 aa22.97■■□□□ 1.27
NME1-208ENST00000487481 A0A0G2JS52 829 aa22.96■■□□□ 1.27
NME1-208ENST00000487481 MYT1Q01538 1121 aa22.96■■□□□ 1.27
NME1-208ENST00000487481 PIK3C2GO75747 1445 aa22.96■■□□□ 1.27
NME1-208ENST00000487481 TMEM132EQ6IEE7 984 aa22.95■■□□□ 1.26
NME1-208ENST00000487481 SPATA31E1Q6ZUB1 1445 aa22.95■■□□□ 1.26
NME1-208ENST00000487481 SIRT1Q96EB6 747 aa22.93■■□□□ 1.26
NME1-208ENST00000487481 DISP2A7MBM2 1401 aa22.92■■□□□ 1.26
NME1-208ENST00000487481 FAM83GA6ND36 823 aa22.92■■□□□ 1.26
NME1-208ENST00000487481 PLEKHG5O94827 1062 aa22.92■■□□□ 1.26
NME1-208ENST00000487481 FAM98CQ17RN3 349 aaKnown RBP22.92■■□□□ 1.26
NME1-208ENST00000487481 LMOD2Q6P5Q4 547 aa22.91■■□□□ 1.26
NME1-208ENST00000487481 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
NME1-208ENST00000487481 TNS1Q9HBL0 1735 aaKnown RBP22.91■■□□□ 1.26
NME1-208ENST00000487481 EN1Q05925 392 aaPredicted RBP22.9■■□□□ 1.26
NME1-208ENST00000487481 RGL3Q3MIN7 710 aa22.9■■□□□ 1.26
NME1-208ENST00000487481 COL14A1Q05707 1796 aaKnown RBP22.9■■□□□ 1.26
NME1-208ENST00000487481 R3HDM1Q15032 1099 aaKnown RBP22.88■■□□□ 1.25
NME1-208ENST00000487481 THSD7AQ9UPZ6 1657 aa22.87■■□□□ 1.25
NME1-208ENST00000487481 ANKARQ7Z5J8 1434 aa22.87■■□□□ 1.25
NME1-208ENST00000487481 TRPM3Q9HCF6 1732 aaPredicted RBP22.87■■□□□ 1.25
NME1-208ENST00000487481 ADGRB2O60241 1585 aa22.86■■□□□ 1.25
NME1-208ENST00000487481 BTG4Q9NY30 223 aa22.86■■□□□ 1.25
NME1-208ENST00000487481 ALS2Q96Q42 1657 aa22.85■■□□□ 1.25
NME1-208ENST00000487481 SPATA31A5Q5VU36 1347 aa22.82■■□□□ 1.24
NME1-208ENST00000487481 SPATA31A7Q8IWB4 1347 aa22.82■■□□□ 1.24
NME1-208ENST00000487481 DHX57Q6P158 1386 aaKnown RBP22.82■■□□□ 1.24
NME1-208ENST00000487481 FAM182BQ5T319 152 aa22.81■■□□□ 1.24
NME1-208ENST00000487481 C14orf93Q9H972 538 aaKnown RBP22.81■■□□□ 1.24
NME1-208ENST00000487481 CRYBG1Q9Y4K1 1723 aa22.8■■□□□ 1.24
NME1-208ENST00000487481 PMFBP1Q8TBY8 1022 aa22.8■■□□□ 1.24
NME1-208ENST00000487481 DLC1Q96QB1 1528 aa22.79■■□□□ 1.24
NME1-208ENST00000487481 EZH2Q15910 746 aaKnown RBP22.79■■□□□ 1.24
NME1-208ENST00000487481 PRAM1Q96QH2 718 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms