RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 COL22A1Q8NFW1 1626 aaPredicted RBP12.77□□□□□ -0.36
HOXA9-204ENST00000487384 XPCQ01831 940 aaPredicted RBP12.77□□□□□ -0.37
HOXA9-204ENST00000487384 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.37
HOXA9-204ENST00000487384 ATRNO75882 1429 aa12.77□□□□□ -0.37
HOXA9-204ENST00000487384 ESCO1Q5FWF5 840 aa12.76□□□□□ -0.37
HOXA9-204ENST00000487384 PPLO60437 1756 aa12.76□□□□□ -0.37
HOXA9-204ENST00000487384 VGFO15240 615 aaPredicted RBP12.75□□□□□ -0.37
HOXA9-204ENST00000487384 MYOM2P54296 1465 aa12.74□□□□□ -0.37
HOXA9-204ENST00000487384 BCL9LQ86UU0 1499 aa12.74□□□□□ -0.37
HOXA9-204ENST00000487384 NUTM2FA1L443 756 aa12.74□□□□□ -0.37
HOXA9-204ENST00000487384 BRWD3Q6RI45 1802 aa12.74□□□□□ -0.37
HOXA9-204ENST00000487384 HFM1A2PYH4 1435 aa12.73□□□□□ -0.37
HOXA9-204ENST00000487384 NPHP3Q7Z494 1330 aa12.73□□□□□ -0.37
HOXA9-204ENST00000487384 FOXO3O43524 673 aa12.73□□□□□ -0.37
HOXA9-204ENST00000487384 PXDNQ92626 1479 aa12.72□□□□□ -0.37
HOXA9-204ENST00000487384 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
HOXA9-204ENST00000487384 STK26Q9P289 416 aa12.71□□□□□ -0.37
HOXA9-204ENST00000487384 CDC42BPGQ6DT37 1551 aa12.71□□□□□ -0.37
HOXA9-204ENST00000487384 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.7□□□□□ -0.38
HOXA9-204ENST00000487384 NAIPQ13075 1403 aa12.7□□□□□ -0.38
HOXA9-204ENST00000487384 PRAG1Q86YV5 1406 aa12.7□□□□□ -0.38
HOXA9-204ENST00000487384 RGPD8O14715 1765 aaPredicted RBP12.69□□□□□ -0.38
HOXA9-204ENST00000487384 PLEKHG5O94827 1062 aa12.69□□□□□ -0.38
HOXA9-204ENST00000487384 PPP4R3CPQ6ZMV5 832 aa12.69□□□□□ -0.38
HOXA9-204ENST00000487384 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
HOXA9-204ENST00000487384 CCDC125Q86Z20 511 aa12.69□□□□□ -0.38
HOXA9-204ENST00000487384 GLI3P10071 1580 aa12.69□□□□□ -0.38
HOXA9-204ENST00000487384 RPGRIP1LQ68CZ1 1315 aa12.68□□□□□ -0.38
HOXA9-204ENST00000487384 RALGAPBQ86X10 1494 aa12.67□□□□□ -0.38
HOXA9-204ENST00000487384 DEFB132Q7Z7B7 95 aa12.67□□□□□ -0.38
HOXA9-204ENST00000487384 UNC5CLQ8IV45 518 aa12.67□□□□□ -0.38
HOXA9-204ENST00000487384 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
HOXA9-204ENST00000487384 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
HOXA9-204ENST00000487384 RGL3Q3MIN7 710 aa12.66□□□□□ -0.38
HOXA9-204ENST00000487384 LRPPRCP42704 1394 aaKnown RBP12.66□□□□□ -0.38
HOXA9-204ENST00000487384 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
HOXA9-204ENST00000487384 FMN2Q9NZ56 1722 aa12.65□□□□□ -0.38
HOXA9-204ENST00000487384 BLMP54132 1417 aaPredicted RBP12.65□□□□□ -0.38
HOXA9-204ENST00000487384 TMEM132EQ6IEE7 984 aa12.65□□□□□ -0.38
HOXA9-204ENST00000487384 SLIT2O94813 1529 aa12.65□□□□□ -0.38
HOXA9-204ENST00000487384 USP32Q8NFA0 1604 aa12.65□□□□□ -0.38
HOXA9-204ENST00000487384 SPATA31A3Q5VYP0 1347 aa12.64□□□□□ -0.39
HOXA9-204ENST00000487384 HAP1P54257 671 aaPredicted RBP12.64□□□□□ -0.39
HOXA9-204ENST00000487384 IFT172Q9UG01 1749 aa12.64□□□□□ -0.39
HOXA9-204ENST00000487384 KIF1AQ12756 1690 aa12.64□□□□□ -0.39
HOXA9-204ENST00000487384 PLCH1Q4KWH8 1693 aa12.64□□□□□ -0.39
HOXA9-204ENST00000487384 RRBP1Q9P2E9 1410 aaKnown RBP12.63□□□□□ -0.39
HOXA9-204ENST00000487384 KNDC1Q76NI1 1749 aa12.63□□□□□ -0.39
HOXA9-204ENST00000487384 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
HOXA9-204ENST00000487384 SEPT12Q8IYM1 358 aa12.63□□□□□ -0.39
HOXA9-204ENST00000487384 CABLES1Q8TDN4 633 aa12.63□□□□□ -0.39
HOXA9-204ENST00000487384 CCDC9Q9Y3X0 531 aaKnown RBP12.63□□□□□ -0.39
HOXA9-204ENST00000487384 SF3B2Q13435 895 aaKnown RBP12.62□□□□□ -0.39
HOXA9-204ENST00000487384 CCDC144AA2RUR9 1427 aa12.62□□□□□ -0.39
HOXA9-204ENST00000487384 TECPR2O15040 1411 aa12.62□□□□□ -0.39
HOXA9-204ENST00000487384 LMOD2Q6P5Q4 547 aa12.61□□□□□ -0.39
HOXA9-204ENST00000487384 ABCA3Q99758 1704 aa12.61□□□□□ -0.39
HOXA9-204ENST00000487384 NWD2Q9ULI1 1742 aa12.6□□□□□ -0.39
HOXA9-204ENST00000487384 ABCC11Q96J66 1382 aa12.59□□□□□ -0.39
HOXA9-204ENST00000487384 A0A0G2JS52 829 aa12.59□□□□□ -0.39
HOXA9-204ENST00000487384 PSDA5PKW4 1024 aaPredicted RBP12.59□□□□□ -0.39
HOXA9-204ENST00000487384 MYT1Q01538 1121 aa12.59□□□□□ -0.39
HOXA9-204ENST00000487384 VPS72Q15906 364 aa12.59□□□□□ -0.39
HOXA9-204ENST00000487384 TNS3Q68CZ2 1445 aa12.59□□□□□ -0.39
HOXA9-204ENST00000487384 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
HOXA9-204ENST00000487384 SAFB2Q14151 953 aaKnown RBP eCLIP12.58□□□□□ -0.4
HOXA9-204ENST00000487384 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
HOXA9-204ENST00000487384 KRT27Q7Z3Y8 459 aa12.58□□□□□ -0.4
HOXA9-204ENST00000487384 PHF8Q9UPP1 1060 aa12.58□□□□□ -0.4
HOXA9-204ENST00000487384 LRP5O75197 1615 aa12.58□□□□□ -0.4
HOXA9-204ENST00000487384 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
HOXA9-204ENST00000487384 PIK3C2GO75747 1445 aa12.57□□□□□ -0.4
HOXA9-204ENST00000487384 PSME1Q06323 249 aa12.57□□□□□ -0.4
HOXA9-204ENST00000487384 NRAPQ86VF7 1730 aa12.55□□□□□ -0.4
HOXA9-204ENST00000487384 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
HOXA9-204ENST00000487384 MSH5O43196 834 aa12.55□□□□□ -0.4
HOXA9-204ENST00000487384 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
HOXA9-204ENST00000487384 PMFBP1Q8TBY8 1022 aa12.55□□□□□ -0.4
HOXA9-204ENST00000487384 NRXN1Q9ULB1 1477 aa12.54□□□□□ -0.4
HOXA9-204ENST00000487384 ONECUT3O60422 494 aaPredicted RBP12.54□□□□□ -0.4
HOXA9-204ENST00000487384 BAG6P46379 1132 aa12.54□□□□□ -0.4
HOXA9-204ENST00000487384 FAM182BQ5T319 152 aa12.54□□□□□ -0.4
HOXA9-204ENST00000487384 HRCP23327 699 aa12.53□□□□□ -0.4
HOXA9-204ENST00000487384 MPHOSPH9Q99550 1183 aa12.53□□□□□ -0.4
HOXA9-204ENST00000487384 SBNO1A3KN83 1393 aa12.53□□□□□ -0.4
HOXA9-204ENST00000487384 ARHGEF10O15013 1369 aa12.53□□□□□ -0.4
HOXA9-204ENST00000487384 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.41
HOXA9-204ENST00000487384 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
HOXA9-204ENST00000487384 CFAP70Q5T0N1 1121 aa12.52□□□□□ -0.41
HOXA9-204ENST00000487384 PRAM1Q96QH2 718 aa12.52□□□□□ -0.41
HOXA9-204ENST00000487384 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
HOXA9-204ENST00000487384 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
HOXA9-204ENST00000487384 C14orf93Q9H972 538 aaKnown RBP12.51□□□□□ -0.41
HOXA9-204ENST00000487384 DHX57Q6P158 1386 aaKnown RBP12.51□□□□□ -0.41
HOXA9-204ENST00000487384 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
HOXA9-204ENST00000487384 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
HOXA9-204ENST00000487384 POGKQ9P215 609 aa12.5□□□□□ -0.41
HOXA9-204ENST00000487384 ALS2Q96Q42 1657 aa12.5□□□□□ -0.41
HOXA9-204ENST00000487384 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
HOXA9-204ENST00000487384 R3HDM1Q15032 1099 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms