RNA–Protein interactions for RNA: ENST00000487364.1

ATP13A1-209, Transcript of ATPase 13A1, human

TSL 5

Gene ATP13A1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP13A1-209	ENST00000487364	HRC	P23327	699 aa		33.2	■■■□□ 2.91
ATP13A1-209	ENST00000487364	C14orf93	Q9H972	538 aa	Known RBP	33.19	■■■□□ 2.9
ATP13A1-209	ENST00000487364	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.19	■■■□□ 2.9
ATP13A1-209	ENST00000487364	MYOM2	P54296	1465 aa		33.18	■■■□□ 2.9
ATP13A1-209	ENST00000487364	CFAP70	Q5T0N1	1121 aa		33.17	■■■□□ 2.9
ATP13A1-209	ENST00000487364	ESCO1	Q5FWF5	840 aa		33.15	■■■□□ 2.9
ATP13A1-209	ENST00000487364	CDC42BPG	Q6DT37	1551 aa		33.15	■■■□□ 2.9
ATP13A1-209	ENST00000487364	NRXN1	Q9ULB1	1477 aa		33.15	■■■□□ 2.9
ATP13A1-209	ENST00000487364	PLEKHH1	Q9ULM0	1364 aa		33.14	■■■□□ 2.9
ATP13A1-209	ENST00000487364	ZNF772	Q68DY9	489 aa	Predicted RBP	33.14	■■■□□ 2.9
ATP13A1-209	ENST00000487364	DHX57	Q6P158	1386 aa	Known RBP	33.12	■■■□□ 2.89
ATP13A1-209	ENST00000487364	PNPLA6	Q8IY17	1366 aa		33.12	■■■□□ 2.89
ATP13A1-209	ENST00000487364	KNDC1	Q76NI1	1749 aa		33.11	■■■□□ 2.89
ATP13A1-209	ENST00000487364	NUTM2F	A1L443	756 aa		33.11	■■■□□ 2.89
ATP13A1-209	ENST00000487364	SOS2	Q07890	1332 aa	Predicted RBP	33.09	■■■□□ 2.89
ATP13A1-209	ENST00000487364	KDM2A	Q9Y2K7	1162 aa		33.09	■■■□□ 2.89
ATP13A1-209	ENST00000487364	LAMC1	P11047	1609 aa		33.09	■■■□□ 2.89
ATP13A1-209	ENST00000487364	SIRT1	Q96EB6	747 aa		33.08	■■■□□ 2.89
ATP13A1-209	ENST00000487364	DCAF11	Q8TEB1	546 aa		33.07	■■■□□ 2.88
ATP13A1-209	ENST00000487364	NPHP3	Q7Z494	1330 aa		33.05	■■■□□ 2.88
ATP13A1-209	ENST00000487364	AFF2	P51816	1311 aa		33.03	■■■□□ 2.88
ATP13A1-209	ENST00000487364	C8orf37	Q96NL8	207 aa		33.03	■■■□□ 2.88
ATP13A1-209	ENST00000487364	FOXO3	O43524	673 aa		33.02	■■■□□ 2.88
ATP13A1-209	ENST00000487364	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.02	■■■□□ 2.88
ATP13A1-209	ENST00000487364	PRAM1	Q96QH2	718 aa		33.02	■■■□□ 2.88
ATP13A1-209	ENST00000487364	ADAMTS2	O95450	1211 aa		33	■■■□□ 2.87
ATP13A1-209	ENST00000487364	POGK	Q9P215	609 aa		33	■■■□□ 2.87
ATP13A1-209	ENST00000487364	XPC	Q01831	940 aa	Predicted RBP	32.99	■■■□□ 2.87
ATP13A1-209	ENST00000487364	STAC3	Q96MF2	364 aa		32.97	■■■□□ 2.87
ATP13A1-209	ENST00000487364	RXRB	P28702	533 aa		32.96	■■■□□ 2.87
ATP13A1-209	ENST00000487364	FMN2	Q9NZ56	1722 aa		32.95	■■■□□ 2.87
ATP13A1-209	ENST00000487364	NGLY1	Q96IV0	654 aa		32.95	■■■□□ 2.87
ATP13A1-209	ENST00000487364	PXDN	Q92626	1479 aa		32.94	■■■□□ 2.86
ATP13A1-209	ENST00000487364	TRAK1	Q9UPV9	953 aa		32.94	■■■□□ 2.86
ATP13A1-209	ENST00000487364	DLC1	Q96QB1	1528 aa		32.92	■■■□□ 2.86
ATP13A1-209	ENST00000487364	ADGRB1	O14514	1584 aa		32.92	■■■□□ 2.86
ATP13A1-209	ENST00000487364	QTRT2	Q9H974	415 aa	Known RBP	32.88	■■■□□ 2.85
ATP13A1-209	ENST00000487364	PHF8	Q9UPP1	1060 aa		32.87	■■■□□ 2.85
ATP13A1-209	ENST00000487364	KIF1A	Q12756	1690 aa		32.85	■■■□□ 2.85
ATP13A1-209	ENST00000487364	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.85	■■■□□ 2.85
ATP13A1-209	ENST00000487364	KRT28	Q7Z3Y7	464 aa		32.85	■■■□□ 2.85
ATP13A1-209	ENST00000487364	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.85	■■■□□ 2.85
ATP13A1-209	ENST00000487364	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.83	■■■□□ 2.85
ATP13A1-209	ENST00000487364	USP21	Q9UK80	565 aa		32.81	■■■□□ 2.84
ATP13A1-209	ENST00000487364	SPATA31A3	Q5VYP0	1347 aa		32.8	■■■□□ 2.84
ATP13A1-209	ENST00000487364	RBM6	P78332	1123 aa	Known RBP	32.8	■■■□□ 2.84
ATP13A1-209	ENST00000487364	PSME1	Q06323	249 aa		32.8	■■■□□ 2.84
ATP13A1-209	ENST00000487364	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.78	■■■□□ 2.84
ATP13A1-209	ENST00000487364	RGPD8	O14715	1765 aa	Predicted RBP	32.78	■■■□□ 2.84
ATP13A1-209	ENST00000487364	ANKAR	Q7Z5J8	1434 aa		32.77	■■■□□ 2.84
ATP13A1-209	ENST00000487364	ADGRB2	O60241	1585 aa		32.77	■■■□□ 2.84
ATP13A1-209	ENST00000487364	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.76	■■■□□ 2.83
ATP13A1-209	ENST00000487364	PMFBP1	Q8TBY8	1022 aa		32.76	■■■□□ 2.83
ATP13A1-209	ENST00000487364	EIF3A	Q14152	1382 aa	Known RBP	32.74	■■■□□ 2.83
ATP13A1-209	ENST00000487364	WASL	O00401	505 aa	Predicted RBP	32.73	■■■□□ 2.83
ATP13A1-209	ENST00000487364	LMOD2	Q6P5Q4	547 aa		32.73	■■■□□ 2.83
ATP13A1-209	ENST00000487364	TRPC5	Q9UL62	973 aa	Predicted RBP	32.73	■■■□□ 2.83
ATP13A1-209	ENST00000487364	TNS3	Q68CZ2	1445 aa		32.71	■■■□□ 2.83
ATP13A1-209	ENST00000487364	PLEKHG5	O94827	1062 aa		32.71	■■■□□ 2.83
ATP13A1-209	ENST00000487364	HAP1	P54257	671 aa	Predicted RBP	32.71	■■■□□ 2.83
ATP13A1-209	ENST00000487364	USP32	Q8NFA0	1604 aa		32.7	■■■□□ 2.83
ATP13A1-209	ENST00000487364	SBNO1	A3KN83	1393 aa		32.69	■■■□□ 2.82
ATP13A1-209	ENST00000487364	RGS12	O14924	1447 aa		32.68	■■■□□ 2.82
ATP13A1-209	ENST00000487364	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.67	■■■□□ 2.82
ATP13A1-209	ENST00000487364	PRR36	Q9H6K5	1346 aa		32.67	■■■□□ 2.82
ATP13A1-209	ENST00000487364	TULP4	Q9NRJ4	1543 aa		32.67	■■■□□ 2.82
ATP13A1-209	ENST00000487364	ARHGEF10	O15013	1369 aa		32.65	■■■□□ 2.82
ATP13A1-209	ENST00000487364	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.65	■■■□□ 2.82
ATP13A1-209	ENST00000487364	ATRN	O75882	1429 aa		32.64	■■■□□ 2.82
ATP13A1-209	ENST00000487364	CABLES1	Q8TDN4	633 aa		32.64	■■■□□ 2.82
ATP13A1-209	ENST00000487364	GPRASP1	Q5JY77	1395 aa		32.63	■■■□□ 2.81
ATP13A1-209	ENST00000487364	NBPF1	Q3BBV0	1214 aa		32.63	■■■□□ 2.81
ATP13A1-209	ENST00000487364	MARF1	Q9Y4F3	1742 aa	Known RBP	32.63	■■■□□ 2.81
ATP13A1-209	ENST00000487364	BCL9L	Q86UU0	1499 aa		32.62	■■■□□ 2.81
ATP13A1-209	ENST00000487364	NGDN	Q8NEJ9	315 aa	Known RBP	32.62	■■■□□ 2.81
ATP13A1-209	ENST00000487364	KIAA1210	Q9ULL0	1709 aa		32.62	■■■□□ 2.81
ATP13A1-209	ENST00000487364	NUDT16	Q96DE0	195 aa	Known RBP	32.59	■■■□□ 2.81
ATP13A1-209	ENST00000487364	SIN3A	Q96ST3	1273 aa		32.59	■■■□□ 2.81
ATP13A1-209	ENST00000487364	L3MBTL2	Q969R5	705 aa		32.58	■■■□□ 2.81
ATP13A1-209	ENST00000487364	CDK19	Q9BWU1	502 aa		32.58	■■■□□ 2.81
ATP13A1-209	ENST00000487364	NEUROD1	Q13562	356 aa		32.57	■■■□□ 2.8
ATP13A1-209	ENST00000487364	UNC5CL	Q8IV45	518 aa		32.57	■■■□□ 2.8
ATP13A1-209	ENST00000487364	PAK3	O75914	559 aa	Predicted RBP	32.54	■■■□□ 2.8
ATP13A1-209	ENST00000487364	GJD4	Q96KN9	370 aa	Predicted RBP	32.54	■■■□□ 2.8
ATP13A1-209	ENST00000487364	SLIT2	O94813	1529 aa		32.53	■■■□□ 2.8
ATP13A1-209	ENST00000487364	ATP7B	P35670	1465 aa		32.53	■■■□□ 2.8
ATP13A1-209	ENST00000487364	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.5	■■■□□ 2.79
ATP13A1-209	ENST00000487364	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.49	■■■□□ 2.79
ATP13A1-209	ENST00000487364	ATAD2	Q6PL18	1390 aa		32.48	■■■□□ 2.79
ATP13A1-209	ENST00000487364	ITSN1	Q15811	1721 aa		32.48	■■■□□ 2.79
ATP13A1-209	ENST00000487364	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.46	■■■□□ 2.79
ATP13A1-209	ENST00000487364	CCDC61	Q9Y6R9	512 aa		32.46	■■■□□ 2.79
ATP13A1-209	ENST00000487364	ABCA3	Q99758	1704 aa		32.46	■■■□□ 2.79
ATP13A1-209	ENST00000487364	SRPK2	P78362	688 aa	Known RBP	32.45	■■■□□ 2.79
ATP13A1-209	ENST00000487364	RALGAPB	Q86X10	1494 aa		32.44	■■■□□ 2.78
ATP13A1-209	ENST00000487364	FAM83G	A6ND36	823 aa		32.44	■■■□□ 2.78
ATP13A1-209	ENST00000487364	CCDC9	Q9Y3X0	531 aa	Known RBP	32.44	■■■□□ 2.78
ATP13A1-209	ENST00000487364	ALS2	Q96Q42	1657 aa		32.43	■■■□□ 2.78
ATP13A1-209	ENST00000487364	ACE	P12821	1306 aa		32.42	■■■□□ 2.78
ATP13A1-209	ENST00000487364	VPS72	Q15906	364 aa		32.41	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms