RNA–Protein interactions for RNA: ENST00000487055.1

KIF3A-206, Transcript of kinesin family member 3A, humanhuman

TSL 3

Gene KIF3A, Length 731 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-206ENST00000487055 SLC19A1P41440 591 aa9.23□□□□□ -0.93
KIF3A-206ENST00000487055 MSS51Q4VC12 460 aa9.23□□□□□ -0.93
KIF3A-206ENST00000487055 BRICD5Q6PL45 260 aa9.23□□□□□ -0.93
KIF3A-206ENST00000487055 SLC24A3Q9HC58 644 aa9.22□□□□□ -0.93
KIF3A-206ENST00000487055 GIGYF2Q6Y7W6 1299 aaKnown RBP9.21□□□□□ -0.94
KIF3A-206ENST00000487055 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.94
KIF3A-206ENST00000487055 PPEF1O14829 653 aaPredicted RBP9.2□□□□□ -0.94
KIF3A-206ENST00000487055 TRIM66O15016 1216 aa9.2□□□□□ -0.94
KIF3A-206ENST00000487055 RNF19BQ6ZMZ0 732 aa9.2□□□□□ -0.94
KIF3A-206ENST00000487055 FAM160A2Q8N612 972 aaPredicted RBP9.19□□□□□ -0.94
KIF3A-206ENST00000487055 CCDC9Q9Y3X0 531 aaKnown RBP9.19□□□□□ -0.94
KIF3A-206ENST00000487055 GFRA3O60609 400 aa9.18□□□□□ -0.94
KIF3A-206ENST00000487055 DIXDC1Q155Q3 683 aa9.18□□□□□ -0.94
KIF3A-206ENST00000487055 SPRYD7Q5W111 196 aa9.18□□□□□ -0.94
KIF3A-206ENST00000487055 USB1Q9BQ65 265 aaKnown RBP9.18□□□□□ -0.94
KIF3A-206ENST00000487055 NRG2O14511 850 aaPredicted RBP9.17□□□□□ -0.94
KIF3A-206ENST00000487055 ZNF598Q86UK7 904 aaKnown RBP9.17□□□□□ -0.94
KIF3A-206ENST00000487055 PARP9Q8IXQ6 854 aa9.17□□□□□ -0.94
KIF3A-206ENST00000487055 RPIAP49247 311 aa9.16□□□□□ -0.94
KIF3A-206ENST00000487055 FCF1Q9Y324 198 aaKnown RBP9.16□□□□□ -0.94
KIF3A-206ENST00000487055 ZBTB7CA1YPR0 619 aa9.15□□□□□ -0.94
KIF3A-206ENST00000487055 MMP16P51512 607 aa9.15□□□□□ -0.94
KIF3A-206ENST00000487055 Q6ZNB5 142 aa9.15□□□□□ -0.94
KIF3A-206ENST00000487055 LIAT1Q6ZQX7 453 aa9.15□□□□□ -0.94
KIF3A-206ENST00000487055 SPIRE2Q8WWL2 714 aa9.15□□□□□ -0.94
KIF3A-206ENST00000487055 EMID1Q96A84 441 aaPredicted RBP9.15□□□□□ -0.94
KIF3A-206ENST00000487055 PDZRN3Q9UPQ7 1066 aa9.15□□□□□ -0.94
KIF3A-206ENST00000487055 FDX1P10109 184 aa9.14□□□□□ -0.95
KIF3A-206ENST00000487055 HLA-CQ95604 372 aa9.14□□□□□ -0.95
KIF3A-206ENST00000487055 BEGAINQ9BUH8 593 aa9.14□□□□□ -0.95
KIF3A-206ENST00000487055 PRDM9Q9NQV7 894 aa9.14□□□□□ -0.95
KIF3A-206ENST00000487055 PDE4DQ08499 809 aa9.13□□□□□ -0.95
KIF3A-206ENST00000487055 PLA2G2CQ5R387 149 aa9.13□□□□□ -0.95
KIF3A-206ENST00000487055 ZNF697Q5TEC3 545 aa9.13□□□□□ -0.95
KIF3A-206ENST00000487055 RETREG3Q86VR2 466 aa9.13□□□□□ -0.95
KIF3A-206ENST00000487055 ZBTB24O43167 697 aaPredicted RBP9.12□□□□□ -0.95
KIF3A-206ENST00000487055 DXOO77932 396 aaKnown RBP9.12□□□□□ -0.95
KIF3A-206ENST00000487055 CD2BP2O95400 341 aaKnown RBP9.12□□□□□ -0.95
KIF3A-206ENST00000487055 GJA5P36382 358 aa9.12□□□□□ -0.95
KIF3A-206ENST00000487055 GUCA2AQ02747 115 aa9.12□□□□□ -0.95
KIF3A-206ENST00000487055 C1orf115Q9H7X2 142 aa9.12□□□□□ -0.95
KIF3A-206ENST00000487055 PRR20EP86478 221 aa9.11□□□□□ -0.95
KIF3A-206ENST00000487055 PRR20CP86479 221 aa9.11□□□□□ -0.95
KIF3A-206ENST00000487055 PRR20DP86480 221 aa9.11□□□□□ -0.95
KIF3A-206ENST00000487055 PRR20BP86481 221 aa9.11□□□□□ -0.95
KIF3A-206ENST00000487055 PRR20AP86496 221 aa9.11□□□□□ -0.95
KIF3A-206ENST00000487055 SPDYE5A6NIY4 337 aa9.09□□□□□ -0.95
KIF3A-206ENST00000487055 C6orf229H3BNL8 230 aa9.09□□□□□ -0.95
KIF3A-206ENST00000487055 MS4A1P11836 297 aa9.09□□□□□ -0.95
KIF3A-206ENST00000487055 PDIA4P13667 645 aaKnown RBP9.09□□□□□ -0.95
KIF3A-206ENST00000487055 JUNDP17535 347 aa9.09□□□□□ -0.95
KIF3A-206ENST00000487055 TBC1D2Q9BYX2 928 aa9.09□□□□□ -0.95
KIF3A-206ENST00000487055 MOXD2PA6NHM9 499 aa9.08□□□□□ -0.96
KIF3A-206ENST00000487055 TRIM67Q6ZTA4 783 aa9.08□□□□□ -0.96
KIF3A-206ENST00000487055 PCDHGC3Q9UN70 934 aa9.08□□□□□ -0.96
KIF3A-206ENST00000487055 GDF9O60383 454 aa9.06□□□□□ -0.96
KIF3A-206ENST00000487055 NDUFV2P19404 249 aa9.06□□□□□ -0.96
KIF3A-206ENST00000487055 MTMR2Q13614 643 aa9.06□□□□□ -0.96
KIF3A-206ENST00000487055 RSBN1LQ6PCB5 846 aaPredicted RBP9.06□□□□□ -0.96
KIF3A-206ENST00000487055 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
KIF3A-206ENST00000487055 TRAF7Q6Q0C0 670 aa9.05□□□□□ -0.96
KIF3A-206ENST00000487055 SPTLC1O15269 473 aa9.04□□□□□ -0.96
KIF3A-206ENST00000487055 TRIM32Q13049 653 aa9.04□□□□□ -0.96
KIF3A-206ENST00000487055 ARID3CA6NKF2 412 aa9.03□□□□□ -0.96
KIF3A-206ENST00000487055 TNFRSF10AO00220 468 aa9.03□□□□□ -0.96
KIF3A-206ENST00000487055 DGAT1O75907 488 aa9.03□□□□□ -0.96
KIF3A-206ENST00000487055 DESI1Q6ICB0 168 aa9.03□□□□□ -0.96
KIF3A-206ENST00000487055 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
KIF3A-206ENST00000487055 NUDT12Q9BQG2 462 aa9.03□□□□□ -0.96
KIF3A-206ENST00000487055 FOXC1Q12948 553 aa9.02□□□□□ -0.97
KIF3A-206ENST00000487055 PTPRNQ16849 979 aa9.02□□□□□ -0.97
KIF3A-206ENST00000487055 PKDCCQ504Y2 493 aa9.02□□□□□ -0.97
KIF3A-206ENST00000487055 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
KIF3A-206ENST00000487055 PRR7Q8TB68 274 aa9.02□□□□□ -0.97
KIF3A-206ENST00000487055 ZBTB3Q9H5J0 574 aa9.02□□□□□ -0.97
KIF3A-206ENST00000487055 PKD2L1Q9P0L9 805 aa9.02□□□□□ -0.97
KIF3A-206ENST00000487055 TUSC1Q2TAM9 212 aa9.01□□□□□ -0.97
KIF3A-206ENST00000487055 RIC3Q7Z5B4 369 aa9.01□□□□□ -0.97
KIF3A-206ENST00000487055 IL27Q8NEV9 243 aa9.01□□□□□ -0.97
KIF3A-206ENST00000487055 APBB1O00213 710 aa9□□□□□ -0.97
KIF3A-206ENST00000487055 WNT7AO00755 349 aa9□□□□□ -0.97
KIF3A-206ENST00000487055 CCNYL3P0C7X3 344 aa9□□□□□ -0.97
KIF3A-206ENST00000487055 GPBP1L1Q9HC44 474 aaPredicted RBP9□□□□□ -0.97
KIF3A-206ENST00000487055 WNT7BP56706 349 aa8.99□□□□□ -0.97
KIF3A-206ENST00000487055 MYSM1Q5VVJ2 828 aa8.99□□□□□ -0.97
KIF3A-206ENST00000487055 FAM187AA6NFU0 413 aa8.98□□□□□ -0.97
KIF3A-206ENST00000487055 CYP4X1Q8N118 509 aa8.98□□□□□ -0.97
KIF3A-206ENST00000487055 PCDHB15Q9Y5E8 787 aa8.97□□□□□ -0.97
KIF3A-206ENST00000487055 LCE2BO14633 110 aa8.96□□□□□ -0.98
KIF3A-206ENST00000487055 DDRGK1Q96HY6 314 aa8.96□□□□□ -0.98
KIF3A-206ENST00000487055 EVA1BQ9NVM1 165 aa8.96□□□□□ -0.98
KIF3A-206ENST00000487055 TOR4AQ9NXH8 423 aa8.96□□□□□ -0.98
KIF3A-206ENST00000487055 LOC105371045A0A1W2PR82 267 aa8.95□□□□□ -0.98
KIF3A-206ENST00000487055 CLK2P49760 499 aaKnown RBP8.95□□□□□ -0.98
KIF3A-206ENST00000487055 KDM4CQ9H3R0 1056 aa8.95□□□□□ -0.98
KIF3A-206ENST00000487055 TTC24A2A3L6 582 aaPredicted RBP8.94□□□□□ -0.98
KIF3A-206ENST00000487055 KCNH2Q12809 1159 aa8.94□□□□□ -0.98
KIF3A-206ENST00000487055 CSPP1Q1MSJ5 1256 aa8.94□□□□□ -0.98
KIF3A-206ENST00000487055 LIMD1Q9UGP4 676 aa8.94□□□□□ -0.98
KIF3A-206ENST00000487055 NUTM2BA6NNL0 878 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms