RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 TTC24A2A3L6 582 aaPredicted RBP9.34□□□□□ -0.91
SNRNP27-204ENST00000487029 MSS51Q4VC12 460 aa9.33□□□□□ -0.92
SNRNP27-204ENST00000487029 J3QL48 77 aa9.32□□□□□ -0.92
SNRNP27-204ENST00000487029 WNT7AO00755 349 aa9.32□□□□□ -0.92
SNRNP27-204ENST00000487029 SNRPBP14678 240 aaKnown RBP9.32□□□□□ -0.92
SNRNP27-204ENST00000487029 ZBTB24O43167 697 aaPredicted RBP9.31□□□□□ -0.92
SNRNP27-204ENST00000487029 TRIM32Q13049 653 aa9.31□□□□□ -0.92
SNRNP27-204ENST00000487029 SULF1Q8IWU6 871 aa9.31□□□□□ -0.92
SNRNP27-204ENST00000487029 MRGPRX2Q96LB1 330 aa9.31□□□□□ -0.92
SNRNP27-204ENST00000487029 SNIP1Q8TAD8 396 aaKnown RBP9.3□□□□□ -0.92
SNRNP27-204ENST00000487029 ATP13A2Q9NQ11 1180 aa9.3□□□□□ -0.92
SNRNP27-204ENST00000487029 MMP16P51512 607 aa9.29□□□□□ -0.92
SNRNP27-204ENST00000487029 HLA-CQ95604 372 aa9.28□□□□□ -0.92
SNRNP27-204ENST00000487029 WIPF1O43516 503 aa9.27□□□□□ -0.93
SNRNP27-204ENST00000487029 SMYD5Q6GMV2 418 aa9.27□□□□□ -0.93
SNRNP27-204ENST00000487029 HPS1Q92902 700 aa9.27□□□□□ -0.93
SNRNP27-204ENST00000487029 CD46P15529 392 aa9.25□□□□□ -0.93
SNRNP27-204ENST00000487029 TERTO14746 1132 aaKnown RBP9.24□□□□□ -0.93
SNRNP27-204ENST00000487029 DXOO77932 396 aaKnown RBP9.24□□□□□ -0.93
SNRNP27-204ENST00000487029 SKOR1P84550 965 aa9.24□□□□□ -0.93
SNRNP27-204ENST00000487029 GRIPAP1Q4V328 841 aa9.24□□□□□ -0.93
SNRNP27-204ENST00000487029 TRIM47Q96LD4 638 aa9.24□□□□□ -0.93
SNRNP27-204ENST00000487029 Q3C1V9 767 aa9.23□□□□□ -0.93
SNRNP27-204ENST00000487029 USB1Q9BQ65 265 aaKnown RBP9.23□□□□□ -0.93
SNRNP27-204ENST00000487029 STK17AQ9UEE5 414 aa9.23□□□□□ -0.93
SNRNP27-204ENST00000487029 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.94
SNRNP27-204ENST00000487029 GPIHBP1Q8IV16 184 aa9.21□□□□□ -0.94
SNRNP27-204ENST00000487029 CCDC24Q8N4L8 307 aa9.21□□□□□ -0.94
SNRNP27-204ENST00000487029 KDM4AO75164 1064 aa9.2□□□□□ -0.94
SNRNP27-204ENST00000487029 GUCA2AQ02747 115 aa9.19□□□□□ -0.94
SNRNP27-204ENST00000487029 SENP2Q9HC62 589 aa9.19□□□□□ -0.94
SNRNP27-204ENST00000487029 INSM1Q01101 510 aaPredicted RBP9.18□□□□□ -0.94
SNRNP27-204ENST00000487029 SYMPKQ92797 1274 aaKnown RBP9.17□□□□□ -0.94
SNRNP27-204ENST00000487029 REPIN1Q9BWE0 567 aaKnown RBP9.17□□□□□ -0.94
SNRNP27-204ENST00000487029 HOXA2O43364 376 aa9.15□□□□□ -0.94
SNRNP27-204ENST00000487029 WNT7BP56706 349 aa9.15□□□□□ -0.94
SNRNP27-204ENST00000487029 MDM2Q00987 491 aaPredicted RBP9.15□□□□□ -0.94
SNRNP27-204ENST00000487029 PTCRAQ6ISU1 281 aaPredicted RBP9.15□□□□□ -0.94
SNRNP27-204ENST00000487029 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
SNRNP27-204ENST00000487029 SIAH2O43255 324 aa9.13□□□□□ -0.95
SNRNP27-204ENST00000487029 BMP1P13497 986 aa9.13□□□□□ -0.95
SNRNP27-204ENST00000487029 MAP2K5Q13163 448 aa9.13□□□□□ -0.95
SNRNP27-204ENST00000487029 KIFC2Q96AC6 838 aa9.13□□□□□ -0.95
SNRNP27-204ENST00000487029 IRF6O14896 467 aa9.12□□□□□ -0.95
SNRNP27-204ENST00000487029 JUNDP17535 347 aa9.12□□□□□ -0.95
SNRNP27-204ENST00000487029 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
SNRNP27-204ENST00000487029 TRIM46Q7Z4K8 759 aa9.12□□□□□ -0.95
SNRNP27-204ENST00000487029 USP46P62068 366 aa9.11□□□□□ -0.95
SNRNP27-204ENST00000487029 GMPRP36959 345 aa9.09□□□□□ -0.95
SNRNP27-204ENST00000487029 VEGFBP49765 207 aa9.09□□□□□ -0.95
SNRNP27-204ENST00000487029 NXF1Q9UBU9 619 aaKnown RBP9.09□□□□□ -0.95
SNRNP27-204ENST00000487029 PLCB2Q00722 1185 aa9.07□□□□□ -0.96
SNRNP27-204ENST00000487029 EHBP1Q8NDI1 1231 aa9.07□□□□□ -0.96
SNRNP27-204ENST00000487029 NUDT12Q9BQG2 462 aa9.07□□□□□ -0.96
SNRNP27-204ENST00000487029 PCDHGC3Q9UN70 934 aa9.07□□□□□ -0.96
SNRNP27-204ENST00000487029 CAPN5O15484 640 aaPredicted RBP9.06□□□□□ -0.96
SNRNP27-204ENST00000487029 SH3BP2P78314 561 aa9.06□□□□□ -0.96
SNRNP27-204ENST00000487029 FAM217BQ9NTX9 383 aaPredicted RBP9.06□□□□□ -0.96
SNRNP27-204ENST00000487029 CCDC102AQ96A19 550 aa9.05□□□□□ -0.96
SNRNP27-204ENST00000487029 KDM2AQ9Y2K7 1162 aa9.05□□□□□ -0.96
SNRNP27-204ENST00000487029 MINK1Q8N4C8 1332 aaPredicted RBP9.05□□□□□ -0.96
SNRNP27-204ENST00000487029 RETREG3Q86VR2 466 aa9.04□□□□□ -0.96
SNRNP27-204ENST00000487029 SLC16A10Q8TF71 515 aa9.04□□□□□ -0.96
SNRNP27-204ENST00000487029 ERBB4Q15303 1308 aa9.04□□□□□ -0.96
SNRNP27-204ENST00000487029 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
SNRNP27-204ENST00000487029 WASF2Q9Y6W5 498 aa9.03□□□□□ -0.96
SNRNP27-204ENST00000487029 H3BM21 787 aa9.01□□□□□ -0.97
SNRNP27-204ENST00000487029 ZSCAN1Q8NBB4 408 aa9.01□□□□□ -0.97
SNRNP27-204ENST00000487029 ZFP42Q96MM3 310 aa9.01□□□□□ -0.97
SNRNP27-204ENST00000487029 TLL2Q9Y6L7 1015 aa9.01□□□□□ -0.97
SNRNP27-204ENST00000487029 CCNYL3P0C7X3 344 aa9□□□□□ -0.97
SNRNP27-204ENST00000487029 FDX1P10109 184 aa9□□□□□ -0.97
SNRNP27-204ENST00000487029 LINC01559Q495D7 138 aa9□□□□□ -0.97
SNRNP27-204ENST00000487029 NUTM1Q86Y26 1132 aa9□□□□□ -0.97
SNRNP27-204ENST00000487029 IRF7Q92985 503 aa9□□□□□ -0.97
SNRNP27-204ENST00000487029 C6orf229H3BNL8 230 aa8.99□□□□□ -0.97
SNRNP27-204ENST00000487029 MS4A1P11836 297 aa8.99□□□□□ -0.97
SNRNP27-204ENST00000487029 CLCN1P35523 988 aa8.99□□□□□ -0.97
SNRNP27-204ENST00000487029 BAP1Q92560 729 aa8.99□□□□□ -0.97
SNRNP27-204ENST00000487029 UNC93B1Q9H1C4 597 aa8.99□□□□□ -0.97
SNRNP27-204ENST00000487029 NDUFV2P19404 249 aa8.98□□□□□ -0.97
SNRNP27-204ENST00000487029 NPAS3Q8IXF0 933 aa8.98□□□□□ -0.97
SNRNP27-204ENST00000487029 EVA1BQ9NVM1 165 aa8.97□□□□□ -0.97
SNRNP27-204ENST00000487029 SOBPA7XYQ1 873 aa8.96□□□□□ -0.98
SNRNP27-204ENST00000487029 SPIRE2Q8WWL2 714 aa8.96□□□□□ -0.98
SNRNP27-204ENST00000487029 FAM181BA6NEQ2 426 aa8.95□□□□□ -0.98
SNRNP27-204ENST00000487029 SLC24A1O60721 1099 aa8.95□□□□□ -0.98
SNRNP27-204ENST00000487029 KCNH2Q12809 1159 aa8.95□□□□□ -0.98
SNRNP27-204ENST00000487029 NNTQ13423 1086 aa8.95□□□□□ -0.98
SNRNP27-204ENST00000487029 PTPRNQ16849 979 aa8.95□□□□□ -0.98
SNRNP27-204ENST00000487029 MOXD2PA6NHM9 499 aa8.94□□□□□ -0.98
SNRNP27-204ENST00000487029 ZNF511Q8NB15 262 aa8.94□□□□□ -0.98
SNRNP27-204ENST00000487029 TIMP2P16035 220 aa8.93□□□□□ -0.98
SNRNP27-204ENST00000487029 SSTR3P32745 418 aaPredicted RBP8.93□□□□□ -0.98
SNRNP27-204ENST00000487029 HAP1P54257 671 aaPredicted RBP8.93□□□□□ -0.98
SNRNP27-204ENST00000487029 MRPL14Q6P1L8 145 aaKnown RBP8.93□□□□□ -0.98
SNRNP27-204ENST00000487029 PRR7Q8TB68 274 aa8.93□□□□□ -0.98
SNRNP27-204ENST00000487029 PURBQ96QR8 312 aaKnown RBP8.93□□□□□ -0.98
SNRNP27-204ENST00000487029 KLF16Q9BXK1 252 aaPredicted RBP8.93□□□□□ -0.98
SNRNP27-204ENST00000487029 LOC100996750A0A140TA64 210 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms