RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 RGL3Q3MIN7 710 aa21.32■■□□□ 1
CLDN11-207ENST00000486975 ROBO2Q9HCK4 1378 aa21.32■■□□□ 1
CLDN11-207ENST00000486975 JCADQ9P266 1359 aa21.32■■□□□ 1
CLDN11-207ENST00000486975 NALCNQ8IZF0 1738 aa21.31■■□□□ 1
CLDN11-207ENST00000486975 PIK3C2GO75747 1445 aa21.3■■□□□ 1
CLDN11-207ENST00000486975 BRINP3Q76B58 766 aa21.3■■□□□ 1
CLDN11-207ENST00000486975 ASXL1Q8IXJ9 1541 aa21.29■■□□□ 1
CLDN11-207ENST00000486975 TECPR2O15040 1411 aa21.29■■□□□ 1
CLDN11-207ENST00000486975 MYOM2P54296 1465 aa21.27■■□□□ 1
CLDN11-207ENST00000486975 NRXN1Q9ULB1 1477 aa21.27■■□□□ 1
CLDN11-207ENST00000486975 LRPPRCP42704 1394 aaKnown RBP21.25■□□□□ 0.99
CLDN11-207ENST00000486975 ABCC11Q96J66 1382 aa21.23■□□□□ 0.99
CLDN11-207ENST00000486975 C1orf167Q5SNV9 1468 aa21.23■□□□□ 0.99
CLDN11-207ENST00000486975 SPATA31A6Q5VVP1 1343 aa21.23■□□□□ 0.99
CLDN11-207ENST00000486975 NHSL1Q5SYE7 1610 aa21.22■□□□□ 0.99
CLDN11-207ENST00000486975 RGS17Q9UGC6 210 aaPredicted RBP21.22■□□□□ 0.99
CLDN11-207ENST00000486975 SHPRHQ149N8 1683 aa21.21■□□□□ 0.99
CLDN11-207ENST00000486975 KNDC1Q76NI1 1749 aa21.21■□□□□ 0.99
CLDN11-207ENST00000486975 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
CLDN11-207ENST00000486975 LAMC1P11047 1609 aa21.21■□□□□ 0.99
CLDN11-207ENST00000486975 C14orf93Q9H972 538 aaKnown RBP21.2■□□□□ 0.98
CLDN11-207ENST00000486975 YTHDC2Q9H6S0 1430 aaKnown RBP21.19■□□□□ 0.98
CLDN11-207ENST00000486975 ZBTB22O15209 634 aa21.17■□□□□ 0.98
CLDN11-207ENST00000486975 SIRT1Q96EB6 747 aa21.17■□□□□ 0.98
CLDN11-207ENST00000486975 LRP6O75581 1613 aa21.16■□□□□ 0.98
CLDN11-207ENST00000486975 TMEM132EQ6IEE7 984 aa21.16■□□□□ 0.98
CLDN11-207ENST00000486975 STAC3Q96MF2 364 aa21.15■□□□□ 0.98
CLDN11-207ENST00000486975 STK26Q9P289 416 aa21.15■□□□□ 0.98
CLDN11-207ENST00000486975 LRRC59Q96AG4 307 aaKnown RBP21.14■□□□□ 0.97
CLDN11-207ENST00000486975 DHX57Q6P158 1386 aaKnown RBP21.13■□□□□ 0.97
CLDN11-207ENST00000486975 CFAP70Q5T0N1 1121 aa21.13■□□□□ 0.97
CLDN11-207ENST00000486975 WAPLQ7Z5K2 1190 aa21.12■□□□□ 0.97
CLDN11-207ENST00000486975 PLEKHH1Q9ULM0 1364 aa21.11■□□□□ 0.97
CLDN11-207ENST00000486975 ORAI2Q96SN7 254 aa21.11■□□□□ 0.97
CLDN11-207ENST00000486975 SOS2Q07890 1332 aaPredicted RBP21.1■□□□□ 0.97
CLDN11-207ENST00000486975 ADGRB1O14514 1584 aa21.1■□□□□ 0.97
CLDN11-207ENST00000486975 PNPLA6Q8IY17 1366 aa21.1■□□□□ 0.97
CLDN11-207ENST00000486975 DLC1Q96QB1 1528 aa21.09■□□□□ 0.97
CLDN11-207ENST00000486975 POLA2Q14181 598 aa21.09■□□□□ 0.97
CLDN11-207ENST00000486975 POTEAQ6S8J7 498 aa21.09■□□□□ 0.97
CLDN11-207ENST00000486975 DDX17Q92841 729 aaKnown RBP21.09■□□□□ 0.97
CLDN11-207ENST00000486975 ATF5Q9Y2D1 282 aaPredicted RBP21.09■□□□□ 0.97
CLDN11-207ENST00000486975 DCAF11Q8TEB1 546 aa21.07■□□□□ 0.96
CLDN11-207ENST00000486975 FMN2Q9NZ56 1722 aa21.05■□□□□ 0.96
CLDN11-207ENST00000486975 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
CLDN11-207ENST00000486975 NPHP3Q7Z494 1330 aa21.04■□□□□ 0.96
CLDN11-207ENST00000486975 ESCO1Q5FWF5 840 aa21.04■□□□□ 0.96
CLDN11-207ENST00000486975 ZNF772Q68DY9 489 aaPredicted RBP21.03■□□□□ 0.96
CLDN11-207ENST00000486975 PXDNQ92626 1479 aa21.02■□□□□ 0.96
CLDN11-207ENST00000486975 NUTM2BA6NNL0 878 aaPredicted RBP21.01■□□□□ 0.95
CLDN11-207ENST00000486975 NUTM2EB1AL46 878 aaPredicted RBP21.01■□□□□ 0.95
CLDN11-207ENST00000486975 NUTM2AQ8IVF1 878 aaPredicted RBP21.01■□□□□ 0.95
CLDN11-207ENST00000486975 PRAM1Q96QH2 718 aa21.01■□□□□ 0.95
CLDN11-207ENST00000486975 KDM2AQ9Y2K7 1162 aa21.01■□□□□ 0.95
CLDN11-207ENST00000486975 ADGRB2O60241 1585 aa21■□□□□ 0.95
CLDN11-207ENST00000486975 KIF1AQ12756 1690 aa20.99■□□□□ 0.95
CLDN11-207ENST00000486975 COL22A1Q8NFW1 1626 aaPredicted RBP20.99■□□□□ 0.95
CLDN11-207ENST00000486975 NUTM2FA1L443 756 aa20.97■□□□□ 0.95
CLDN11-207ENST00000486975 FOXO3O43524 673 aa20.97■□□□□ 0.95
CLDN11-207ENST00000486975 POGKQ9P215 609 aa20.97■□□□□ 0.95
CLDN11-207ENST00000486975 ANKARQ7Z5J8 1434 aa20.96■□□□□ 0.95
CLDN11-207ENST00000486975 TRAK1Q9UPV9 953 aa20.95■□□□□ 0.94
CLDN11-207ENST00000486975 AFF2P51816 1311 aa20.95■□□□□ 0.94
CLDN11-207ENST00000486975 KIAA1210Q9ULL0 1709 aa20.93■□□□□ 0.94
CLDN11-207ENST00000486975 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
CLDN11-207ENST00000486975 PHF8Q9UPP1 1060 aa20.92■□□□□ 0.94
CLDN11-207ENST00000486975 EIF3AQ14152 1382 aaKnown RBP20.92■□□□□ 0.94
CLDN11-207ENST00000486975 C8orf37Q96NL8 207 aa20.91■□□□□ 0.94
CLDN11-207ENST00000486975 CDK12Q9NYV4 1490 aaPredicted RBP20.91■□□□□ 0.94
CLDN11-207ENST00000486975 USP32Q8NFA0 1604 aa20.9■□□□□ 0.94
CLDN11-207ENST00000486975 SPATA31A3Q5VYP0 1347 aa20.9■□□□□ 0.94
CLDN11-207ENST00000486975 XPCQ01831 940 aaPredicted RBP20.9■□□□□ 0.94
CLDN11-207ENST00000486975 ARHGEF28Q8N1W1 1705 aaKnown RBP20.9■□□□□ 0.94
CLDN11-207ENST00000486975 ADAMTS2O95450 1211 aa20.89■□□□□ 0.93
CLDN11-207ENST00000486975 TULP4Q9NRJ4 1543 aa20.88■□□□□ 0.93
CLDN11-207ENST00000486975 RXRBP28702 533 aa20.88■□□□□ 0.93
CLDN11-207ENST00000486975 MINK1Q8N4C8 1332 aaPredicted RBP20.87■□□□□ 0.93
CLDN11-207ENST00000486975 KRT28Q7Z3Y7 464 aa20.87■□□□□ 0.93
CLDN11-207ENST00000486975 NGLY1Q96IV0 654 aa20.87■□□□□ 0.93
CLDN11-207ENST00000486975 RGPD8O14715 1765 aaPredicted RBP20.87■□□□□ 0.93
CLDN11-207ENST00000486975 SBNO1A3KN83 1393 aa20.86■□□□□ 0.93
CLDN11-207ENST00000486975 WASLO00401 505 aaPredicted RBP20.86■□□□□ 0.93
CLDN11-207ENST00000486975 PSME1Q06323 249 aa20.86■□□□□ 0.93
CLDN11-207ENST00000486975 FNBP4Q8N3X1 1017 aaPredicted RBP20.86■□□□□ 0.93
CLDN11-207ENST00000486975 TNS3Q68CZ2 1445 aa20.86■□□□□ 0.93
CLDN11-207ENST00000486975 HIRIP3Q9BW71 556 aaPredicted RBP20.85■□□□□ 0.93
CLDN11-207ENST00000486975 PRR36Q9H6K5 1346 aa20.83■□□□□ 0.93
CLDN11-207ENST00000486975 QTRT2Q9H974 415 aaKnown RBP20.83■□□□□ 0.93
CLDN11-207ENST00000486975 RBM6P78332 1123 aaKnown RBP20.82■□□□□ 0.92
CLDN11-207ENST00000486975 L3MBTL2Q969R5 705 aa20.82■□□□□ 0.92
CLDN11-207ENST00000486975 ARHGEF10O15013 1369 aa20.82■□□□□ 0.92
CLDN11-207ENST00000486975 USP21Q9UK80 565 aa20.81■□□□□ 0.92
CLDN11-207ENST00000486975 MARF1Q9Y4F3 1742 aaKnown RBP20.81■□□□□ 0.92
CLDN11-207ENST00000486975 NBPF1Q3BBV0 1214 aa20.8■□□□□ 0.92
CLDN11-207ENST00000486975 PMFBP1Q8TBY8 1022 aa20.8■□□□□ 0.92
CLDN11-207ENST00000486975 ATP7BP35670 1465 aa20.8■□□□□ 0.92
CLDN11-207ENST00000486975 TRPC5Q9UL62 973 aaPredicted RBP20.79■□□□□ 0.92
CLDN11-207ENST00000486975 ATRNO75882 1429 aa20.78■□□□□ 0.92
CLDN11-207ENST00000486975 GPRASP1Q5JY77 1395 aa20.78■□□□□ 0.92
CLDN11-207ENST00000486975 SIN3AQ96ST3 1273 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms