RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 UBR1Q8IWV7 1749 aa7.89□□□□□ -1.15
SF1-217ENST00000486960 FAM135AQ9P2D6 1515 aa7.89□□□□□ -1.15
SF1-217ENST00000486960 GIGYF1O75420 1035 aaPredicted RBP7.89□□□□□ -1.15
SF1-217ENST00000486960 MKRN4PQ13434 485 aaPredicted RBP7.89□□□□□ -1.15
SF1-217ENST00000486960 MYT1LQ9UL68 1186 aa7.89□□□□□ -1.15
SF1-217ENST00000486960 PRDM15P57071 1507 aaPredicted RBP7.88□□□□□ -1.15
SF1-217ENST00000486960 TICAM2Q86XR7 235 aa7.88□□□□□ -1.15
SF1-217ENST00000486960 IL27Q8NEV9 243 aa7.88□□□□□ -1.15
SF1-217ENST00000486960 ZNF692Q9BU19 519 aaPredicted RBP7.88□□□□□ -1.15
SF1-217ENST00000486960 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.88□□□□□ -1.15
SF1-217ENST00000486960 GLI3P10071 1580 aa7.88□□□□□ -1.15
SF1-217ENST00000486960 TNS1Q9HBL0 1735 aaKnown RBP7.86□□□□□ -1.15
SF1-217ENST00000486960 SAMD9Q5K651 1589 aa7.86□□□□□ -1.15
SF1-217ENST00000486960 NINLQ9Y2I6 1382 aa7.85□□□□□ -1.15
SF1-217ENST00000486960 ARHGAP5Q13017 1502 aa7.85□□□□□ -1.15
SF1-217ENST00000486960 SPDYE2BA6NHP3 402 aa7.85□□□□□ -1.15
SF1-217ENST00000486960 SPDYE6P0CI01 402 aa7.85□□□□□ -1.15
SF1-217ENST00000486960 FLIIQ13045 1269 aa7.85□□□□□ -1.15
SF1-217ENST00000486960 MKRN3Q13064 507 aaKnown RBP7.85□□□□□ -1.15
SF1-217ENST00000486960 SPDYE2Q495Y8 402 aa7.85□□□□□ -1.15
SF1-217ENST00000486960 THEMISQ8N1K5 641 aaPredicted RBP7.85□□□□□ -1.15
SF1-217ENST00000486960 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.85□□□□□ -1.15
SF1-217ENST00000486960 PZPP20742 1482 aa7.85□□□□□ -1.15
SF1-217ENST00000486960 NCOA2Q15596 1464 aa7.85□□□□□ -1.15
SF1-217ENST00000486960 NLRP1Q9C000 1473 aa7.85□□□□□ -1.15
SF1-217ENST00000486960 SAMD9LQ8IVG5 1584 aa7.84□□□□□ -1.15
SF1-217ENST00000486960 GTPBP6O43824 516 aaPredicted RBP7.84□□□□□ -1.15
SF1-217ENST00000486960 LTKP29376 864 aa7.84□□□□□ -1.15
SF1-217ENST00000486960 EFCAB2Q5VUJ9 269 aa7.84□□□□□ -1.15
SF1-217ENST00000486960 CC2D2BQ6DHV5 1058 aa7.84□□□□□ -1.15
SF1-217ENST00000486960 CWC22Q9HCG8 908 aaKnown RBP7.84□□□□□ -1.15
SF1-217ENST00000486960 TNRC18O15417 2968 aaPredicted RBP7.84□□□□□ -1.15
SF1-217ENST00000486960 ABCC3O15438 1527 aa7.83□□□□□ -1.16
SF1-217ENST00000486960 MYOM1P52179 1685 aa7.83□□□□□ -1.16
SF1-217ENST00000486960 CAMSAP2Q08AD1 1489 aa7.83□□□□□ -1.16
SF1-217ENST00000486960 ARHGAP23Q9P227 1491 aa7.83□□□□□ -1.16
SF1-217ENST00000486960 PLEKHD1A6NEE1 506 aa7.83□□□□□ -1.16
SF1-217ENST00000486960 CANXP27824 592 aaKnown RBP7.83□□□□□ -1.16
SF1-217ENST00000486960 CERS3Q8IU89 383 aa7.83□□□□□ -1.16
SF1-217ENST00000486960 TNS4Q8IZW8 715 aa7.83□□□□□ -1.16
SF1-217ENST00000486960 ZNF592Q92610 1267 aa7.83□□□□□ -1.16
SF1-217ENST00000486960 FBXW7Q969H0 707 aa7.83□□□□□ -1.16
SF1-217ENST00000486960 MARF1Q9Y4F3 1742 aaKnown RBP7.83□□□□□ -1.16
SF1-217ENST00000486960 CFAP65Q6ZU64 1925 aaKnown RBP7.82□□□□□ -1.16
SF1-217ENST00000486960 RGPD1P0DJD0 1748 aa7.82□□□□□ -1.16
SF1-217ENST00000486960 NUP188Q5SRE5 1749 aa7.82□□□□□ -1.16
SF1-217ENST00000486960 TNS2Q63HR2 1409 aa7.82□□□□□ -1.16
SF1-217ENST00000486960 SETD5Q9C0A6 1442 aa7.82□□□□□ -1.16
SF1-217ENST00000486960 USP21Q9UK80 565 aa7.82□□□□□ -1.16
SF1-217ENST00000486960 TRPC5Q9UL62 973 aaPredicted RBP7.82□□□□□ -1.16
SF1-217ENST00000486960 PNPLA6Q8IY17 1366 aa7.82□□□□□ -1.16
SF1-217ENST00000486960 NRKQ7Z2Y5 1582 aa7.81□□□□□ -1.16
SF1-217ENST00000486960 MIA2Q96PC5 1412 aa7.81□□□□□ -1.16
SF1-217ENST00000486960 ADAMTS2O95450 1211 aa7.81□□□□□ -1.16
SF1-217ENST00000486960 GGT6Q6P531 493 aa7.81□□□□□ -1.16
SF1-217ENST00000486960 RREB1Q92766 1687 aa7.81□□□□□ -1.16
SF1-217ENST00000486960 MSH6P52701 1360 aa7.81□□□□□ -1.16
SF1-217ENST00000486960 A2MP01023 1474 aa7.81□□□□□ -1.16
SF1-217ENST00000486960 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.81□□□□□ -1.16
SF1-217ENST00000486960 INO80Q9ULG1 1556 aaPredicted RBP7.8□□□□□ -1.16
SF1-217ENST00000486960 HSPA6P17066 643 aa7.8□□□□□ -1.16
SF1-217ENST00000486960 EN1Q05925 392 aaPredicted RBP7.8□□□□□ -1.16
SF1-217ENST00000486960 PROSER2Q86WR7 435 aaPredicted RBP7.8□□□□□ -1.16
SF1-217ENST00000486960 PKNOX2Q96KN3 472 aa7.8□□□□□ -1.16
SF1-217ENST00000486960 NKTRP30414 1462 aaKnown RBP7.8□□□□□ -1.16
SF1-217ENST00000486960 RALGAPBQ86X10 1494 aa7.8□□□□□ -1.16
SF1-217ENST00000486960 CHD2O14647 1828 aaKnown RBP7.8□□□□□ -1.16
SF1-217ENST00000486960 SLIT1O75093 1534 aa7.79□□□□□ -1.16
SF1-217ENST00000486960 TRAK2O60296 914 aa7.79□□□□□ -1.16
SF1-217ENST00000486960 KCNV2Q8TDN2 545 aa7.79□□□□□ -1.16
SF1-217ENST00000486960 AKT1S1Q96B36 256 aa7.79□□□□□ -1.16
SF1-217ENST00000486960 ZFP91Q96JP5 570 aaPredicted RBP7.79□□□□□ -1.16
SF1-217ENST00000486960 BCL11BQ9C0K0 894 aaPredicted RBP7.79□□□□□ -1.16
SF1-217ENST00000486960 TET3O43151 1660 aa7.79□□□□□ -1.16
SF1-217ENST00000486960 PREX2Q70Z35 1606 aa7.78□□□□□ -1.16
SF1-217ENST00000486960 ZMYND10O75800 440 aa7.78□□□□□ -1.16
SF1-217ENST00000486960 NKX1-1Q15270 411 aaPredicted RBP7.78□□□□□ -1.16
SF1-217ENST00000486960 ASXL1Q8IXJ9 1541 aa7.78□□□□□ -1.16
SF1-217ENST00000486960 A6NJR5 290 aa7.77□□□□□ -1.17
SF1-217ENST00000486960 SF3B2Q13435 895 aaKnown RBP7.77□□□□□ -1.17
SF1-217ENST00000486960 FNBP4Q8N3X1 1017 aaPredicted RBP7.77□□□□□ -1.17
SF1-217ENST00000486960 DNAJC5GQ8N7S2 189 aa7.77□□□□□ -1.17
SF1-217ENST00000486960 GPBP1L1Q9HC44 474 aaPredicted RBP7.77□□□□□ -1.17
SF1-217ENST00000486960 AMOTL2Q9Y2J4 779 aa7.77□□□□□ -1.17
SF1-217ENST00000486960 GPATCH8Q9UKJ3 1502 aaKnown RBP7.77□□□□□ -1.17
SF1-217ENST00000486960 CASZ1Q86V15 1759 aa7.76□□□□□ -1.17
SF1-217ENST00000486960 KCNA6P17658 529 aa7.76□□□□□ -1.17
SF1-217ENST00000486960 BARGINQ6ZT62 677 aa7.76□□□□□ -1.17
SF1-217ENST00000486960 BRINP3Q76B58 766 aa7.76□□□□□ -1.17
SF1-217ENST00000486960 BRPF3Q9ULD4 1205 aa7.76□□□□□ -1.17
SF1-217ENST00000486960 MROH1Q8NDA8 1641 aa7.76□□□□□ -1.17
SF1-217ENST00000486960 BAG6P46379 1132 aa7.75□□□□□ -1.17
SF1-217ENST00000486960 FGD1P98174 961 aa7.75□□□□□ -1.17
SF1-217ENST00000486960 DDX17Q92841 729 aaKnown RBP7.75□□□□□ -1.17
SF1-217ENST00000486960 CIZ1Q9ULV3 898 aaPredicted RBP7.75□□□□□ -1.17
SF1-217ENST00000486960 CDC42BPAQ5VT25 1732 aa7.75□□□□□ -1.17
SF1-217ENST00000486960 PATL2C9JE40 543 aaKnown RBP7.74□□□□□ -1.17
SF1-217ENST00000486960 PPP1R1BQ9UD71 204 aaPredicted RBP7.74□□□□□ -1.17
SF1-217ENST00000486960 SERPINA10Q9UK55 444 aa7.74□□□□□ -1.17
SF1-217ENST00000486960 KIAA1210Q9ULL0 1709 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms