RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 NPHP3Q7Z494 1330 aa30.11■■■□□ 2.41
PHF1-208ENST00000486845 TRPC5Q9UL62 973 aaPredicted RBP30.1■■■□□ 2.41
PHF1-208ENST00000486845 FNBP4Q8N3X1 1017 aaPredicted RBP30.09■■■□□ 2.41
PHF1-208ENST00000486845 ESCO1Q5FWF5 840 aa30.08■■■□□ 2.41
PHF1-208ENST00000486845 CCDC144AA2RUR9 1427 aa30.07■■■□□ 2.4
PHF1-208ENST00000486845 ATAD2Q6PL18 1390 aa30.07■■■□□ 2.4
PHF1-208ENST00000486845 MYOM2P54296 1465 aa30.06■■■□□ 2.4
PHF1-208ENST00000486845 PXDNQ92626 1479 aa30.06■■■□□ 2.4
PHF1-208ENST00000486845 TECPR2O15040 1411 aa30.05■■■□□ 2.4
PHF1-208ENST00000486845 ADGRF5Q8IZF2 1346 aa30.05■■■□□ 2.4
PHF1-208ENST00000486845 FOXD1Q16676 465 aa30.05■■■□□ 2.4
PHF1-208ENST00000486845 ATRNO75882 1429 aa30.05■■■□□ 2.4
PHF1-208ENST00000486845 ANKRD30BQ9BXX2 1392 aa30.03■■■□□ 2.4
PHF1-208ENST00000486845 LRPPRCP42704 1394 aaKnown RBP30.03■■■□□ 2.4
PHF1-208ENST00000486845 SPATA31E1Q6ZUB1 1445 aa30.02■■■□□ 2.4
PHF1-208ENST00000486845 IFT172Q9UG01 1749 aa30.02■■■□□ 2.4
PHF1-208ENST00000486845 STK26Q9P289 416 aa30.01■■■□□ 2.39
PHF1-208ENST00000486845 RGL3Q3MIN7 710 aa30■■■□□ 2.39
PHF1-208ENST00000486845 KNDC1Q76NI1 1749 aa29.99■■■□□ 2.39
PHF1-208ENST00000486845 MARF1Q9Y4F3 1742 aaKnown RBP29.99■■■□□ 2.39
PHF1-208ENST00000486845 FOXO3O43524 673 aa29.99■■■□□ 2.39
PHF1-208ENST00000486845 ABCC11Q96J66 1382 aa29.99■■■□□ 2.39
PHF1-208ENST00000486845 WAPLQ7Z5K2 1190 aa29.98■■■□□ 2.39
PHF1-208ENST00000486845 XPCQ01831 940 aaPredicted RBP29.97■■■□□ 2.39
PHF1-208ENST00000486845 BCL9LQ86UU0 1499 aa29.95■■■□□ 2.39
PHF1-208ENST00000486845 PIK3C2GO75747 1445 aa29.95■■■□□ 2.38
PHF1-208ENST00000486845 NUTM2FA1L443 756 aa29.94■■■□□ 2.38
PHF1-208ENST00000486845 FMN2Q9NZ56 1722 aa29.93■■■□□ 2.38
PHF1-208ENST00000486845 KIF1AQ12756 1690 aa29.93■■■□□ 2.38
PHF1-208ENST00000486845 MPHOSPH9Q99550 1183 aa29.93■■■□□ 2.38
PHF1-208ENST00000486845 PLEKHH1Q9ULM0 1364 aa29.92■■■□□ 2.38
PHF1-208ENST00000486845 TMEM132EQ6IEE7 984 aa29.92■■■□□ 2.38
PHF1-208ENST00000486845 YTHDC2Q9H6S0 1430 aaKnown RBP29.9■■■□□ 2.38
PHF1-208ENST00000486845 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.89■■■□□ 2.38
PHF1-208ENST00000486845 SPATA31A3Q5VYP0 1347 aa29.88■■■□□ 2.37
PHF1-208ENST00000486845 GJD4Q96KN9 370 aaPredicted RBP29.87■■■□□ 2.37
PHF1-208ENST00000486845 CCDC125Q86Z20 511 aa29.85■■■□□ 2.37
PHF1-208ENST00000486845 SIRT1Q96EB6 747 aa29.85■■■□□ 2.37
PHF1-208ENST00000486845 EP400Q96L91 3159 aa29.83■■■□□ 2.37
PHF1-208ENST00000486845 SLIT2O94813 1529 aa29.82■■■□□ 2.36
PHF1-208ENST00000486845 KRT28Q7Z3Y7 464 aa29.82■■■□□ 2.36
PHF1-208ENST00000486845 UNC5CLQ8IV45 518 aa29.82■■■□□ 2.36
PHF1-208ENST00000486845 USP32Q8NFA0 1604 aa29.82■■■□□ 2.36
PHF1-208ENST00000486845 ACIN1Q9UKV3 1341 aaKnown RBP29.81■■■□□ 2.36
PHF1-208ENST00000486845 C14orf93Q9H972 538 aaKnown RBP29.81■■■□□ 2.36
PHF1-208ENST00000486845 ZRANB1Q9UGI0 708 aa29.81■■■□□ 2.36
PHF1-208ENST00000486845 RALGAPBQ86X10 1494 aa29.8■■■□□ 2.36
PHF1-208ENST00000486845 NRXN1Q9ULB1 1477 aa29.79■■■□□ 2.36
PHF1-208ENST00000486845 DHX57Q6P158 1386 aaKnown RBP29.78■■■□□ 2.36
PHF1-208ENST00000486845 GLI3P10071 1580 aa29.78■■■□□ 2.36
PHF1-208ENST00000486845 TNS3Q68CZ2 1445 aa29.78■■■□□ 2.36
PHF1-208ENST00000486845 PSME1Q06323 249 aa29.77■■■□□ 2.36
PHF1-208ENST00000486845 PHF8Q9UPP1 1060 aa29.77■■■□□ 2.36
PHF1-208ENST00000486845 RGPD8O14715 1765 aaPredicted RBP29.77■■■□□ 2.36
PHF1-208ENST00000486845 HAP1P54257 671 aaPredicted RBP29.75■■■□□ 2.35
PHF1-208ENST00000486845 SRCAPQ6ZRS2 3230 aa29.74■■■□□ 2.35
PHF1-208ENST00000486845 CFAP70Q5T0N1 1121 aa29.73■■■□□ 2.35
PHF1-208ENST00000486845 SBNO1A3KN83 1393 aa29.72■■■□□ 2.35
PHF1-208ENST00000486845 ARHGEF10O15013 1369 aa29.7■■■□□ 2.35
PHF1-208ENST00000486845 PRAM1Q96QH2 718 aa29.7■■■□□ 2.35
PHF1-208ENST00000486845 BLMP54132 1417 aaPredicted RBP29.7■■■□□ 2.34
PHF1-208ENST00000486845 NWD2Q9ULI1 1742 aa29.69■■■□□ 2.34
PHF1-208ENST00000486845 DLC1Q96QB1 1528 aa29.69■■■□□ 2.34
PHF1-208ENST00000486845 PLCH1Q4KWH8 1693 aa29.69■■■□□ 2.34
PHF1-208ENST00000486845 SAFB2Q14151 953 aaKnown RBP eCLIP29.68■■■□□ 2.34
PHF1-208ENST00000486845 VPS72Q15906 364 aa29.68■■■□□ 2.34
PHF1-208ENST00000486845 ABCA3Q99758 1704 aa29.68■■■□□ 2.34
PHF1-208ENST00000486845 BRWD3Q6RI45 1802 aa29.67■■■□□ 2.34
PHF1-208ENST00000486845 CABLES1Q8TDN4 633 aa29.67■■■□□ 2.34
PHF1-208ENST00000486845 ANKARQ7Z5J8 1434 aa29.67■■■□□ 2.34
PHF1-208ENST00000486845 LMOD2Q6P5Q4 547 aa29.66■■■□□ 2.34
PHF1-208ENST00000486845 POGKQ9P215 609 aa29.66■■■□□ 2.34
PHF1-208ENST00000486845 ADGRB2O60241 1585 aa29.64■■■□□ 2.34
PHF1-208ENST00000486845 SEPT12Q8IYM1 358 aa29.64■■■□□ 2.34
PHF1-208ENST00000486845 PLEKHG5O94827 1062 aa29.63■■■□□ 2.33
PHF1-208ENST00000486845 CCDC9Q9Y3X0 531 aaKnown RBP29.62■■■□□ 2.33
PHF1-208ENST00000486845 SF3B2Q13435 895 aaKnown RBP29.6■■■□□ 2.33
PHF1-208ENST00000486845 PMFBP1Q8TBY8 1022 aa29.6■■■□□ 2.33
PHF1-208ENST00000486845 ADGRB1O14514 1584 aa29.6■■■□□ 2.33
PHF1-208ENST00000486845 ONECUT3O60422 494 aaPredicted RBP29.59■■■□□ 2.33
PHF1-208ENST00000486845 EIF3AQ14152 1382 aaKnown RBP29.58■■■□□ 2.33
PHF1-208ENST00000486845 TRPM3Q9HCF6 1732 aaPredicted RBP29.56■■■□□ 2.32
PHF1-208ENST00000486845 RAB3GAP2Q9H2M9 1393 aa29.55■■■□□ 2.32
PHF1-208ENST00000486845 FAM83GA6ND36 823 aa29.55■■■□□ 2.32
PHF1-208ENST00000486845 KRT27Q7Z3Y8 459 aa29.55■■■□□ 2.32
PHF1-208ENST00000486845 DEFB132Q7Z7B7 95 aa29.55■■■□□ 2.32
PHF1-208ENST00000486845 GPRASP1Q5JY77 1395 aa29.54■■■□□ 2.32
PHF1-208ENST00000486845 TRAK1Q9UPV9 953 aa29.54■■■□□ 2.32
PHF1-208ENST00000486845 NRAPQ86VF7 1730 aa29.53■■■□□ 2.32
PHF1-208ENST00000486845 TULP4Q9NRJ4 1543 aa29.52■■■□□ 2.32
PHF1-208ENST00000486845 HIRIP3Q9BW71 556 aaPredicted RBP29.52■■■□□ 2.32
PHF1-208ENST00000486845 ALS2Q96Q42 1657 aa29.52■■■□□ 2.32
PHF1-208ENST00000486845 MINK1Q8N4C8 1332 aaPredicted RBP29.5■■■□□ 2.31
PHF1-208ENST00000486845 COL14A1Q05707 1796 aaKnown RBP29.5■■■□□ 2.31
PHF1-208ENST00000486845 A0A0G2JS52 829 aa29.5■■■□□ 2.31
PHF1-208ENST00000486845 MYT1Q01538 1121 aa29.5■■■□□ 2.31
PHF1-208ENST00000486845 PRR36Q9H6K5 1346 aa29.48■■■□□ 2.31
PHF1-208ENST00000486845 BTG4Q9NY30 223 aa29.48■■■□□ 2.31
PHF1-208ENST00000486845 WASLO00401 505 aaPredicted RBP29.46■■■□□ 2.31
PHF1-208ENST00000486845 KDM2AQ9Y2K7 1162 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms