RNA–Protein interactions for RNA: ENST00000486686.1

LAMP3-205, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 5

Gene LAMP3, Length 469 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-205ENST00000486686 ROBO2Q9HCK4 1378 aa25.12■■□□□ 1.61
LAMP3-205ENST00000486686 NAIPQ13075 1403 aa25.09■■□□□ 1.61
LAMP3-205ENST00000486686 PRAG1Q86YV5 1406 aa25.09■■□□□ 1.61
LAMP3-205ENST00000486686 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
LAMP3-205ENST00000486686 NPHP3Q7Z494 1330 aa25.07■■□□□ 1.6
LAMP3-205ENST00000486686 CCDC125Q86Z20 511 aa25.06■■□□□ 1.6
LAMP3-205ENST00000486686 ESCO1Q5FWF5 840 aa25.05■■□□□ 1.6
LAMP3-205ENST00000486686 RAB3GAP2Q9H2M9 1393 aa25.04■■□□□ 1.6
LAMP3-205ENST00000486686 SLC4A1APQ9BWU0 796 aaKnown RBP25.03■■□□□ 1.6
LAMP3-205ENST00000486686 ZRANB1Q9UGI0 708 aa25.03■■□□□ 1.6
LAMP3-205ENST00000486686 LRPPRCP42704 1394 aaKnown RBP25.02■■□□□ 1.6
LAMP3-205ENST00000486686 ATRNO75882 1429 aa25.02■■□□□ 1.6
LAMP3-205ENST00000486686 COL22A1Q8NFW1 1626 aaPredicted RBP25■■□□□ 1.59
LAMP3-205ENST00000486686 SRCAPQ6ZRS2 3230 aa24.99■■□□□ 1.59
LAMP3-205ENST00000486686 FOXO3O43524 673 aa24.97■■□□□ 1.59
LAMP3-205ENST00000486686 MYOM2P54296 1465 aa24.96■■□□□ 1.59
LAMP3-205ENST00000486686 GJD4Q96KN9 370 aaPredicted RBP24.95■■□□□ 1.58
LAMP3-205ENST00000486686 CDC42BPGQ6DT37 1551 aa24.95■■□□□ 1.58
LAMP3-205ENST00000486686 PPLO60437 1756 aa24.95■■□□□ 1.58
LAMP3-205ENST00000486686 BCL9LQ86UU0 1499 aa24.94■■□□□ 1.58
LAMP3-205ENST00000486686 PXDNQ92626 1479 aa24.92■■□□□ 1.58
LAMP3-205ENST00000486686 STK26Q9P289 416 aa24.92■■□□□ 1.58
LAMP3-205ENST00000486686 XPCQ01831 940 aaPredicted RBP24.91■■□□□ 1.58
LAMP3-205ENST00000486686 WAPLQ7Z5K2 1190 aa24.89■■□□□ 1.58
LAMP3-205ENST00000486686 ABCC11Q96J66 1382 aa24.89■■□□□ 1.57
LAMP3-205ENST00000486686 ANKRD30BQ9BXX2 1392 aa24.89■■□□□ 1.57
LAMP3-205ENST00000486686 ADGRF5Q8IZF2 1346 aa24.88■■□□□ 1.57
LAMP3-205ENST00000486686 UNC5CLQ8IV45 518 aa24.88■■□□□ 1.57
LAMP3-205ENST00000486686 MARF1Q9Y4F3 1742 aaKnown RBP24.88■■□□□ 1.57
LAMP3-205ENST00000486686 EP400Q96L91 3159 aa24.88■■□□□ 1.57
LAMP3-205ENST00000486686 TECPR2O15040 1411 aa24.87■■□□□ 1.57
LAMP3-205ENST00000486686 NUTM2FA1L443 756 aa24.87■■□□□ 1.57
LAMP3-205ENST00000486686 RGL3Q3MIN7 710 aa24.87■■□□□ 1.57
LAMP3-205ENST00000486686 CCDC144AA2RUR9 1427 aa24.86■■□□□ 1.57
LAMP3-205ENST00000486686 SPATA31A3Q5VYP0 1347 aa24.86■■□□□ 1.57
LAMP3-205ENST00000486686 SIRT1Q96EB6 747 aa24.84■■□□□ 1.57
LAMP3-205ENST00000486686 PSME1Q06323 249 aa24.83■■□□□ 1.57
LAMP3-205ENST00000486686 KRT28Q7Z3Y7 464 aa24.83■■□□□ 1.57
LAMP3-205ENST00000486686 CCER1Q8TC90 406 aaPredicted RBP24.83■■□□□ 1.57
LAMP3-205ENST00000486686 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
LAMP3-205ENST00000486686 TMEM132EQ6IEE7 984 aa24.82■■□□□ 1.56
LAMP3-205ENST00000486686 CLSPNQ9HAW4 1339 aa24.82■■□□□ 1.56
LAMP3-205ENST00000486686 HAP1P54257 671 aaPredicted RBP24.81■■□□□ 1.56
LAMP3-205ENST00000486686 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.81■■□□□ 1.56
LAMP3-205ENST00000486686 SLIT2O94813 1529 aa24.8■■□□□ 1.56
LAMP3-205ENST00000486686 BLMP54132 1417 aaPredicted RBP24.79■■□□□ 1.56
LAMP3-205ENST00000486686 SF3B2Q13435 895 aaKnown RBP24.79■■□□□ 1.56
LAMP3-205ENST00000486686 SPATA31E1Q6ZUB1 1445 aa24.78■■□□□ 1.56
LAMP3-205ENST00000486686 RALGAPBQ86X10 1494 aa24.78■■□□□ 1.56
LAMP3-205ENST00000486686 KIF1AQ12756 1690 aa24.78■■□□□ 1.56
LAMP3-205ENST00000486686 MPHOSPH9Q99550 1183 aa24.77■■□□□ 1.56
LAMP3-205ENST00000486686 PHF8Q9UPP1 1060 aa24.76■■□□□ 1.55
LAMP3-205ENST00000486686 PLEKHH1Q9ULM0 1364 aa24.76■■□□□ 1.55
LAMP3-205ENST00000486686 YTHDC2Q9H6S0 1430 aaKnown RBP24.76■■□□□ 1.55
LAMP3-205ENST00000486686 KNDC1Q76NI1 1749 aa24.75■■□□□ 1.55
LAMP3-205ENST00000486686 VPS72Q15906 364 aa24.75■■□□□ 1.55
LAMP3-205ENST00000486686 FMN2Q9NZ56 1722 aa24.75■■□□□ 1.55
LAMP3-205ENST00000486686 SEPT12Q8IYM1 358 aa24.74■■□□□ 1.55
LAMP3-205ENST00000486686 PIK3C2GO75747 1445 aa24.74■■□□□ 1.55
LAMP3-205ENST00000486686 ONECUT3O60422 494 aaPredicted RBP24.73■■□□□ 1.55
LAMP3-205ENST00000486686 C14orf93Q9H972 538 aaKnown RBP24.73■■□□□ 1.55
LAMP3-205ENST00000486686 GLI3P10071 1580 aa24.72■■□□□ 1.55
LAMP3-205ENST00000486686 TNS3Q68CZ2 1445 aa24.71■■□□□ 1.55
LAMP3-205ENST00000486686 CCDC9Q9Y3X0 531 aaKnown RBP24.71■■□□□ 1.55
LAMP3-205ENST00000486686 USP32Q8NFA0 1604 aa24.71■■□□□ 1.55
LAMP3-205ENST00000486686 SBNO1A3KN83 1393 aa24.7■■□□□ 1.55
LAMP3-205ENST00000486686 IFT172Q9UG01 1749 aa24.7■■□□□ 1.54
LAMP3-205ENST00000486686 LMOD2Q6P5Q4 547 aa24.7■■□□□ 1.54
LAMP3-205ENST00000486686 ARHGEF10O15013 1369 aa24.69■■□□□ 1.54
LAMP3-205ENST00000486686 KRT27Q7Z3Y8 459 aa24.69■■□□□ 1.54
LAMP3-205ENST00000486686 CABLES1Q8TDN4 633 aa24.68■■□□□ 1.54
LAMP3-205ENST00000486686 ZEB1P37275 1124 aaPredicted RBP24.67■■□□□ 1.54
LAMP3-205ENST00000486686 DEFB132Q7Z7B7 95 aa24.67■■□□□ 1.54
LAMP3-205ENST00000486686 BRWD3Q6RI45 1802 aa24.65■■□□□ 1.54
LAMP3-205ENST00000486686 NWD2Q9ULI1 1742 aa24.64■■□□□ 1.54
LAMP3-205ENST00000486686 CFAP70Q5T0N1 1121 aa24.64■■□□□ 1.54
LAMP3-205ENST00000486686 PRAM1Q96QH2 718 aa24.64■■□□□ 1.54
LAMP3-205ENST00000486686 POGKQ9P215 609 aa24.64■■□□□ 1.54
LAMP3-205ENST00000486686 NRXN1Q9ULB1 1477 aa24.64■■□□□ 1.53
LAMP3-205ENST00000486686 FAM83GA6ND36 823 aa24.63■■□□□ 1.53
LAMP3-205ENST00000486686 PLEKHG5O94827 1062 aa24.63■■□□□ 1.53
LAMP3-205ENST00000486686 RGPD8O14715 1765 aaPredicted RBP24.62■■□□□ 1.53
LAMP3-205ENST00000486686 BAG6P46379 1132 aa24.61■■□□□ 1.53
LAMP3-205ENST00000486686 SAFB2Q14151 953 aaKnown RBP eCLIP24.61■■□□□ 1.53
LAMP3-205ENST00000486686 A0A0G2JS52 829 aa24.6■■□□□ 1.53
LAMP3-205ENST00000486686 MYT1Q01538 1121 aa24.6■■□□□ 1.53
LAMP3-205ENST00000486686 ANKARQ7Z5J8 1434 aa24.6■■□□□ 1.53
LAMP3-205ENST00000486686 PMFBP1Q8TBY8 1022 aa24.59■■□□□ 1.53
LAMP3-205ENST00000486686 PLCH1Q4KWH8 1693 aa24.58■■□□□ 1.53
LAMP3-205ENST00000486686 GPRASP1Q5JY77 1395 aa24.57■■□□□ 1.52
LAMP3-205ENST00000486686 BTG4Q9NY30 223 aa24.56■■□□□ 1.52
LAMP3-205ENST00000486686 FAM98CQ17RN3 349 aaKnown RBP24.55■■□□□ 1.52
LAMP3-205ENST00000486686 DLC1Q96QB1 1528 aa24.55■■□□□ 1.52
LAMP3-205ENST00000486686 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
LAMP3-205ENST00000486686 ABCA3Q99758 1704 aa24.51■■□□□ 1.51
LAMP3-205ENST00000486686 LRP5O75197 1615 aa24.5■■□□□ 1.51
LAMP3-205ENST00000486686 TRAK1Q9UPV9 953 aa24.49■■□□□ 1.51
LAMP3-205ENST00000486686 NGDNQ8NEJ9 315 aaKnown RBP24.48■■□□□ 1.51
LAMP3-205ENST00000486686 STAC3Q96MF2 364 aa24.48■■□□□ 1.51
LAMP3-205ENST00000486686 COL14A1Q05707 1796 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms