RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 ATRNO75882 1429 aa21.63■■□□□ 1.05
SDCCAG3-211ENST00000486441 ADGRF5Q8IZF2 1346 aa21.62■■□□□ 1.05
SDCCAG3-211ENST00000486441 TRPC5Q9UL62 973 aaPredicted RBP21.62■■□□□ 1.05
SDCCAG3-211ENST00000486441 BCL9LQ86UU0 1499 aa21.61■■□□□ 1.05
SDCCAG3-211ENST00000486441 PXDNQ92626 1479 aa21.61■■□□□ 1.05
SDCCAG3-211ENST00000486441 FOXD1Q16676 465 aa21.61■■□□□ 1.05
SDCCAG3-211ENST00000486441 SLC4A1APQ9BWU0 796 aaKnown RBP21.61■■□□□ 1.05
SDCCAG3-211ENST00000486441 COL22A1Q8NFW1 1626 aaPredicted RBP21.61■■□□□ 1.05
SDCCAG3-211ENST00000486441 PPLO60437 1756 aa21.6■■□□□ 1.05
SDCCAG3-211ENST00000486441 ESCO1Q5FWF5 840 aa21.59■■□□□ 1.05
SDCCAG3-211ENST00000486441 WAPLQ7Z5K2 1190 aa21.59■■□□□ 1.05
SDCCAG3-211ENST00000486441 FOXO3O43524 673 aa21.58■■□□□ 1.05
SDCCAG3-211ENST00000486441 XPCQ01831 940 aaPredicted RBP21.57■■□□□ 1.04
SDCCAG3-211ENST00000486441 ATAD2Q6PL18 1390 aa21.57■■□□□ 1.04
SDCCAG3-211ENST00000486441 NPHP3Q7Z494 1330 aa21.56■■□□□ 1.04
SDCCAG3-211ENST00000486441 CDC42BPGQ6DT37 1551 aa21.56■■□□□ 1.04
SDCCAG3-211ENST00000486441 TECPR2O15040 1411 aa21.55■■□□□ 1.04
SDCCAG3-211ENST00000486441 SPATA31E1Q6ZUB1 1445 aa21.55■■□□□ 1.04
SDCCAG3-211ENST00000486441 PLEKHH1Q9ULM0 1364 aa21.55■■□□□ 1.04
SDCCAG3-211ENST00000486441 LRPPRCP42704 1394 aaKnown RBP21.53■■□□□ 1.04
SDCCAG3-211ENST00000486441 ABCC11Q96J66 1382 aa21.53■■□□□ 1.04
SDCCAG3-211ENST00000486441 TMEM132EQ6IEE7 984 aa21.53■■□□□ 1.04
SDCCAG3-211ENST00000486441 STK26Q9P289 416 aa21.53■■□□□ 1.04
SDCCAG3-211ENST00000486441 NUTM2FA1L443 756 aa21.52■■□□□ 1.04
SDCCAG3-211ENST00000486441 RGL3Q3MIN7 710 aa21.51■■□□□ 1.03
SDCCAG3-211ENST00000486441 GJD4Q96KN9 370 aaPredicted RBP21.51■■□□□ 1.03
SDCCAG3-211ENST00000486441 SPATA31A3Q5VYP0 1347 aa21.48■■□□□ 1.03
SDCCAG3-211ENST00000486441 SLIT2O94813 1529 aa21.47■■□□□ 1.03
SDCCAG3-211ENST00000486441 MPHOSPH9Q99550 1183 aa21.46■■□□□ 1.03
SDCCAG3-211ENST00000486441 ANKRD30BQ9BXX2 1392 aa21.46■■□□□ 1.03
SDCCAG3-211ENST00000486441 MARF1Q9Y4F3 1742 aaKnown RBP21.46■■□□□ 1.03
SDCCAG3-211ENST00000486441 PIK3C2GO75747 1445 aa21.46■■□□□ 1.03
SDCCAG3-211ENST00000486441 UNC5CLQ8IV45 518 aa21.45■■□□□ 1.02
SDCCAG3-211ENST00000486441 SIRT1Q96EB6 747 aa21.45■■□□□ 1.02
SDCCAG3-211ENST00000486441 CCDC125Q86Z20 511 aa21.44■■□□□ 1.02
SDCCAG3-211ENST00000486441 CCDC144AA2RUR9 1427 aa21.44■■□□□ 1.02
SDCCAG3-211ENST00000486441 GLI3P10071 1580 aa21.44■■□□□ 1.02
SDCCAG3-211ENST00000486441 IFT172Q9UG01 1749 aa21.43■■□□□ 1.02
SDCCAG3-211ENST00000486441 KRT28Q7Z3Y7 464 aa21.43■■□□□ 1.02
SDCCAG3-211ENST00000486441 YTHDC2Q9H6S0 1430 aaKnown RBP21.43■■□□□ 1.02
SDCCAG3-211ENST00000486441 RALGAPBQ86X10 1494 aa21.42■■□□□ 1.02
SDCCAG3-211ENST00000486441 C14orf93Q9H972 538 aaKnown RBP21.42■■□□□ 1.02
SDCCAG3-211ENST00000486441 ZRANB1Q9UGI0 708 aa21.42■■□□□ 1.02
SDCCAG3-211ENST00000486441 FMN2Q9NZ56 1722 aa21.41■■□□□ 1.02
SDCCAG3-211ENST00000486441 KNDC1Q76NI1 1749 aa21.41■■□□□ 1.02
SDCCAG3-211ENST00000486441 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.39■■□□□ 1.01
SDCCAG3-211ENST00000486441 CABLES1Q8TDN4 633 aa21.39■■□□□ 1.01
SDCCAG3-211ENST00000486441 ONECUT3O60422 494 aaPredicted RBP21.38■■□□□ 1.01
SDCCAG3-211ENST00000486441 CFAP70Q5T0N1 1121 aa21.37■■□□□ 1.01
SDCCAG3-211ENST00000486441 PHF8Q9UPP1 1060 aa21.37■■□□□ 1.01
SDCCAG3-211ENST00000486441 NRXN1Q9ULB1 1477 aa21.37■■□□□ 1.01
SDCCAG3-211ENST00000486441 VPS72Q15906 364 aa21.35■■□□□ 1.01
SDCCAG3-211ENST00000486441 DEFB132Q7Z7B7 95 aa21.35■■□□□ 1.01
SDCCAG3-211ENST00000486441 USP32Q8NFA0 1604 aa21.34■■□□□ 1.01
SDCCAG3-211ENST00000486441 RGPD8O14715 1765 aaPredicted RBP21.34■■□□□ 1.01
SDCCAG3-211ENST00000486441 SEPT12Q8IYM1 358 aa21.34■■□□□ 1.01
SDCCAG3-211ENST00000486441 BLMP54132 1417 aaPredicted RBP21.34■■□□□ 1.01
SDCCAG3-211ENST00000486441 TNS3Q68CZ2 1445 aa21.33■■□□□ 1.01
SDCCAG3-211ENST00000486441 BRWD3Q6RI45 1802 aa21.33■■□□□ 1.01
SDCCAG3-211ENST00000486441 KIF1AQ12756 1690 aa21.33■■□□□ 1
SDCCAG3-211ENST00000486441 FAM83GA6ND36 823 aa21.32■■□□□ 1
SDCCAG3-211ENST00000486441 SBNO1A3KN83 1393 aa21.32■■□□□ 1
SDCCAG3-211ENST00000486441 PRAM1Q96QH2 718 aa21.31■■□□□ 1
SDCCAG3-211ENST00000486441 DHX57Q6P158 1386 aaKnown RBP21.29■■□□□ 1
SDCCAG3-211ENST00000486441 PSME1Q06323 249 aa21.29■■□□□ 1
SDCCAG3-211ENST00000486441 SAFB2Q14151 953 aaKnown RBP eCLIP21.28■■□□□ 1
SDCCAG3-211ENST00000486441 PMFBP1Q8TBY8 1022 aa21.27■■□□□ 1
SDCCAG3-211ENST00000486441 PLEKHG5O94827 1062 aa21.26■□□□□ 0.99
SDCCAG3-211ENST00000486441 KRT27Q7Z3Y8 459 aa21.24■□□□□ 0.99
SDCCAG3-211ENST00000486441 PRR36Q9H6K5 1346 aa21.24■□□□□ 0.99
SDCCAG3-211ENST00000486441 ABCA3Q99758 1704 aa21.24■□□□□ 0.99
SDCCAG3-211ENST00000486441 NWD2Q9ULI1 1742 aa21.24■□□□□ 0.99
SDCCAG3-211ENST00000486441 ARHGEF10O15013 1369 aa21.23■□□□□ 0.99
SDCCAG3-211ENST00000486441 PLCH1Q4KWH8 1693 aa21.23■□□□□ 0.99
SDCCAG3-211ENST00000486441 DLC1Q96QB1 1528 aa21.23■□□□□ 0.99
SDCCAG3-211ENST00000486441 ADGRB1O14514 1584 aa21.23■□□□□ 0.99
SDCCAG3-211ENST00000486441 ANKARQ7Z5J8 1434 aa21.22■□□□□ 0.99
SDCCAG3-211ENST00000486441 LMOD2Q6P5Q4 547 aa21.22■□□□□ 0.99
SDCCAG3-211ENST00000486441 HAP1P54257 671 aaPredicted RBP21.21■□□□□ 0.99
SDCCAG3-211ENST00000486441 TRPM3Q9HCF6 1732 aaPredicted RBP21.2■□□□□ 0.98
SDCCAG3-211ENST00000486441 HIRIP3Q9BW71 556 aaPredicted RBP21.19■□□□□ 0.98
SDCCAG3-211ENST00000486441 BTG4Q9NY30 223 aa21.19■□□□□ 0.98
SDCCAG3-211ENST00000486441 POGKQ9P215 609 aa21.19■□□□□ 0.98
SDCCAG3-211ENST00000486441 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
SDCCAG3-211ENST00000486441 FAM98CQ17RN3 349 aaKnown RBP21.18■□□□□ 0.98
SDCCAG3-211ENST00000486441 TRAK1Q9UPV9 953 aa21.18■□□□□ 0.98
SDCCAG3-211ENST00000486441 ADGRB2O60241 1585 aa21.18■□□□□ 0.98
SDCCAG3-211ENST00000486441 NRAPQ86VF7 1730 aa21.18■□□□□ 0.98
SDCCAG3-211ENST00000486441 ACIN1Q9UKV3 1341 aaKnown RBP21.17■□□□□ 0.98
SDCCAG3-211ENST00000486441 ALS2Q96Q42 1657 aa21.16■□□□□ 0.98
SDCCAG3-211ENST00000486441 MINK1Q8N4C8 1332 aaPredicted RBP21.15■□□□□ 0.98
SDCCAG3-211ENST00000486441 SF3B2Q13435 895 aaKnown RBP21.15■□□□□ 0.98
SDCCAG3-211ENST00000486441 SPATA31A5Q5VU36 1347 aa21.14■□□□□ 0.97
SDCCAG3-211ENST00000486441 SPATA31A7Q8IWB4 1347 aa21.14■□□□□ 0.97
SDCCAG3-211ENST00000486441 WASLO00401 505 aaPredicted RBP21.14■□□□□ 0.97
SDCCAG3-211ENST00000486441 FAM182BQ5T319 152 aa21.14■□□□□ 0.97
SDCCAG3-211ENST00000486441 PSDA5PKW4 1024 aaPredicted RBP21.12■□□□□ 0.97
SDCCAG3-211ENST00000486441 HRCP23327 699 aa21.12■□□□□ 0.97
SDCCAG3-211ENST00000486441 EN1Q05925 392 aaPredicted RBP21.11■□□□□ 0.97
SDCCAG3-211ENST00000486441 GPRASP1Q5JY77 1395 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms