RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 FAM135BQ49AJ0 1406 aa19.87■□□□□ 0.77
COL9A1-207ENST00000486080 SIRT1Q96EB6 747 aa19.87■□□□□ 0.77
COL9A1-207ENST00000486080 PANK3Q9H999 370 aa19.87■□□□□ 0.77
COL9A1-207ENST00000486080 AMOTL2Q9Y2J4 779 aa19.87■□□□□ 0.77
COL9A1-207ENST00000486080 HSPA2P54652 639 aa19.86■□□□□ 0.77
COL9A1-207ENST00000486080 CABP2Q9NPB3 220 aa19.86■□□□□ 0.77
COL9A1-207ENST00000486080 XRN1Q8IZH2 1706 aaKnown RBP19.84■□□□□ 0.77
COL9A1-207ENST00000486080 PER1O15534 1290 aaPredicted RBP19.83■□□□□ 0.77
COL9A1-207ENST00000486080 CNGB1Q14028 1251 aaPredicted RBP19.83■□□□□ 0.77
COL9A1-207ENST00000486080 CHD2O14647 1828 aaKnown RBP19.83■□□□□ 0.77
COL9A1-207ENST00000486080 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.82■□□□□ 0.76
COL9A1-207ENST00000486080 PIK3R4Q99570 1358 aa19.82■□□□□ 0.76
COL9A1-207ENST00000486080 SRPK2P78362 688 aaKnown RBP19.81■□□□□ 0.76
COL9A1-207ENST00000486080 CDK19Q9BWU1 502 aa19.81■□□□□ 0.76
COL9A1-207ENST00000486080 PRKRIP1Q9H875 184 aaPredicted RBP19.81■□□□□ 0.76
COL9A1-207ENST00000486080 PUS7Q96PZ0 661 aaKnown RBP19.81■□□□□ 0.76
COL9A1-207ENST00000486080 KCNA6P17658 529 aa19.8■□□□□ 0.76
COL9A1-207ENST00000486080 TMC1Q8TDI8 760 aa19.8■□□□□ 0.76
COL9A1-207ENST00000486080 SLC12A5Q9H2X9 1139 aa19.8■□□□□ 0.76
COL9A1-207ENST00000486080 PTCH1Q13635 1447 aa19.8■□□□□ 0.76
COL9A1-207ENST00000486080 STRCQ7RTU9 1775 aa19.77■□□□□ 0.75
COL9A1-207ENST00000486080 WASLO00401 505 aaPredicted RBP19.76■□□□□ 0.75
COL9A1-207ENST00000486080 ADGRB2O60241 1585 aa19.74■□□□□ 0.75
COL9A1-207ENST00000486080 CARD14Q9BXL6 1004 aa19.74■□□□□ 0.75
COL9A1-207ENST00000486080 ATAD2Q6PL18 1390 aa19.74■□□□□ 0.75
COL9A1-207ENST00000486080 CCER2I3L3R5 266 aa19.74■□□□□ 0.75
COL9A1-207ENST00000486080 KNSTRNQ9Y448 316 aa19.74■□□□□ 0.75
COL9A1-207ENST00000486080 CC2D1BQ5T0F9 858 aaKnown RBP19.72■□□□□ 0.75
COL9A1-207ENST00000486080 AMER1Q5JTC6 1135 aaPredicted RBP19.7■□□□□ 0.74
COL9A1-207ENST00000486080 KTN1Q86UP2 1357 aaKnown RBP19.7■□□□□ 0.74
COL9A1-207ENST00000486080 NWD1Q149M9 1564 aa19.7■□□□□ 0.74
COL9A1-207ENST00000486080 CCDC184Q52MB2 194 aa19.69■□□□□ 0.74
COL9A1-207ENST00000486080 RBM33Q96EV2 1170 aaKnown RBP19.69■□□□□ 0.74
COL9A1-207ENST00000486080 CABP1Q9NZU7 370 aa19.69■□□□□ 0.74
COL9A1-207ENST00000486080 NINLQ9Y2I6 1382 aa19.69■□□□□ 0.74
COL9A1-207ENST00000486080 NUDT16Q96DE0 195 aaKnown RBP19.69■□□□□ 0.74
COL9A1-207ENST00000486080 ANKRD36BQ8N2N9 1353 aa19.69■□□□□ 0.74
COL9A1-207ENST00000486080 CD163L1Q9NR16 1453 aa19.68■□□□□ 0.74
COL9A1-207ENST00000486080 NSD3Q9BZ95 1437 aa19.68■□□□□ 0.74
COL9A1-207ENST00000486080 PRR36Q9H6K5 1346 aa19.68■□□□□ 0.74
COL9A1-207ENST00000486080 PARD3Q8TEW0 1356 aa19.67■□□□□ 0.74
COL9A1-207ENST00000486080 RALBP1Q15311 655 aa19.67■□□□□ 0.74
COL9A1-207ENST00000486080 NALCNQ8IZF0 1738 aa19.67■□□□□ 0.74
COL9A1-207ENST00000486080 A0A1W2PP64 1363 aa19.67■□□□□ 0.74
COL9A1-207ENST00000486080 STRCP1A6NGW2 1772 aa19.67■□□□□ 0.74
COL9A1-207ENST00000486080 ATP7BP35670 1465 aa19.66■□□□□ 0.74
COL9A1-207ENST00000486080 NUTM2FA1L443 756 aa19.66■□□□□ 0.74
COL9A1-207ENST00000486080 YTHDC1Q96MU7 727 aaKnown RBP19.66■□□□□ 0.74
COL9A1-207ENST00000486080 PPIP5K1Q6PFW1 1433 aa19.66■□□□□ 0.74
COL9A1-207ENST00000486080 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
COL9A1-207ENST00000486080 RGPD8O14715 1765 aaPredicted RBP19.64■□□□□ 0.73
COL9A1-207ENST00000486080 TERF2IPQ9NYB0 399 aa19.64■□□□□ 0.73
COL9A1-207ENST00000486080 CCDC61Q9Y6R9 512 aa19.64■□□□□ 0.73
COL9A1-207ENST00000486080 TOPAZ1Q8N9V7 1692 aa19.63■□□□□ 0.73
COL9A1-207ENST00000486080 NPC1L1Q9UHC9 1359 aa19.63■□□□□ 0.73
COL9A1-207ENST00000486080 MYBBP1AQ9BQG0 1328 aaKnown RBP19.62■□□□□ 0.73
COL9A1-207ENST00000486080 FMN2Q9NZ56 1722 aa19.61■□□□□ 0.73
COL9A1-207ENST00000486080 HDGFL2Q7Z4V5 671 aaPredicted RBP19.61■□□□□ 0.73
COL9A1-207ENST00000486080 PROSER2Q86WR7 435 aaPredicted RBP19.61■□□□□ 0.73
COL9A1-207ENST00000486080 MRS2Q9HD23 443 aa19.61■□□□□ 0.73
COL9A1-207ENST00000486080 ADGRL3Q9HAR2 1447 aa19.6■□□□□ 0.73
COL9A1-207ENST00000486080 NKTRP30414 1462 aaKnown RBP19.6■□□□□ 0.73
COL9A1-207ENST00000486080 CDC42BPGQ6DT37 1551 aa19.6■□□□□ 0.73
COL9A1-207ENST00000486080 ITSN1Q15811 1721 aa19.59■□□□□ 0.73
COL9A1-207ENST00000486080 CPSF1Q10570 1443 aaKnown RBP19.59■□□□□ 0.73
COL9A1-207ENST00000486080 AKAP12Q02952 1782 aa19.59■□□□□ 0.73
COL9A1-207ENST00000486080 CGNL1Q0VF96 1302 aa19.58■□□□□ 0.73
COL9A1-207ENST00000486080 C14orf37Q86TY3 774 aa19.58■□□□□ 0.72
COL9A1-207ENST00000486080 MON2Q7Z3U7 1717 aa19.56■□□□□ 0.72
COL9A1-207ENST00000486080 PLEKHG3A1L390 1219 aa19.55■□□□□ 0.72
COL9A1-207ENST00000486080 PPP2R1AP30153 589 aa19.55■□□□□ 0.72
COL9A1-207ENST00000486080 NLRP13Q86W25 1043 aa19.55■□□□□ 0.72
COL9A1-207ENST00000486080 ANKARQ7Z5J8 1434 aa19.55■□□□□ 0.72
COL9A1-207ENST00000486080 BRD4O60885 1362 aaPredicted RBP19.54■□□□□ 0.72
COL9A1-207ENST00000486080 KIF20BQ96Q89 1820 aa19.54■□□□□ 0.72
COL9A1-207ENST00000486080 ACEP12821 1306 aa19.54■□□□□ 0.72
COL9A1-207ENST00000486080 PMFBP1Q8TBY8 1022 aa19.53■□□□□ 0.72
COL9A1-207ENST00000486080 TMEM94Q12767 1356 aa19.53■□□□□ 0.72
COL9A1-207ENST00000486080 FYB1O15117 783 aa19.53■□□□□ 0.72
COL9A1-207ENST00000486080 MORC1Q86VD1 984 aa19.53■□□□□ 0.72
COL9A1-207ENST00000486080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.53■□□□□ 0.72
COL9A1-207ENST00000486080 ZNF335Q9H4Z2 1342 aaPredicted RBP19.52■□□□□ 0.72
COL9A1-207ENST00000486080 GGNBP2Q9H3C7 697 aa19.52■□□□□ 0.72
COL9A1-207ENST00000486080 EDC4Q6P2E9 1401 aaKnown RBP19.52■□□□□ 0.71
COL9A1-207ENST00000486080 XIRP1Q702N8 1843 aaKnown RBP19.51■□□□□ 0.71
COL9A1-207ENST00000486080 NSD2O96028 1365 aa19.51■□□□□ 0.71
COL9A1-207ENST00000486080 ANKRD26Q9UPS8 1709 aa19.51■□□□□ 0.71
COL9A1-207ENST00000486080 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
COL9A1-207ENST00000486080 FAM9BQ8IZU0 186 aa19.51■□□□□ 0.71
COL9A1-207ENST00000486080 ZNF692Q9BU19 519 aaPredicted RBP19.51■□□□□ 0.71
COL9A1-207ENST00000486080 C19orf44Q9H6X5 657 aa19.49■□□□□ 0.71
COL9A1-207ENST00000486080 NRKQ7Z2Y5 1582 aa19.49■□□□□ 0.71
COL9A1-207ENST00000486080 POLR3AO14802 1390 aaPredicted RBP19.48■□□□□ 0.71
COL9A1-207ENST00000486080 NGDNQ8NEJ9 315 aaKnown RBP19.48■□□□□ 0.71
COL9A1-207ENST00000486080 PNISRQ8TF01 805 aaKnown RBP19.48■□□□□ 0.71
COL9A1-207ENST00000486080 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
COL9A1-207ENST00000486080 USP6P35125 1406 aa19.47■□□□□ 0.71
COL9A1-207ENST00000486080 NCOA3Q9Y6Q9 1424 aa19.47■□□□□ 0.71
COL9A1-207ENST00000486080 NME9Q86XW9 330 aa19.46■□□□□ 0.71
COL9A1-207ENST00000486080 LRRC7Q96NW7 1537 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms