RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 DNMT1P26358 1616 aaKnown RBP8.48□□□□□ -1.05
COPS3-208ENST00000486032 NLRP6P59044 892 aa8.48□□□□□ -1.05
COPS3-208ENST00000486032 PPP4R3BQ5MIZ7 849 aa8.48□□□□□ -1.05
COPS3-208ENST00000486032 MAST1Q9Y2H9 1570 aa8.48□□□□□ -1.05
COPS3-208ENST00000486032 A2MP01023 1474 aa8.47□□□□□ -1.05
COPS3-208ENST00000486032 CEBPAP49715 358 aaPredicted RBP8.47□□□□□ -1.05
COPS3-208ENST00000486032 TRIM26Q12899 539 aaPredicted RBP8.47□□□□□ -1.05
COPS3-208ENST00000486032 VPS9D1Q9Y2B5 631 aa8.47□□□□□ -1.05
COPS3-208ENST00000486032 AGLP35573 1532 aa8.47□□□□□ -1.05
COPS3-208ENST00000486032 MROH1Q8NDA8 1641 aa8.47□□□□□ -1.05
COPS3-208ENST00000486032 C3P01024 1663 aa8.46□□□□□ -1.05
COPS3-208ENST00000486032 CLTCQ00610 1675 aaKnown RBP8.46□□□□□ -1.05
COPS3-208ENST00000486032 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.46□□□□□ -1.06
COPS3-208ENST00000486032 ANKRD30AQ9BXX3 1397 aa8.45□□□□□ -1.06
COPS3-208ENST00000486032 GOLGA8CPA6NN73 597 aa8.44□□□□□ -1.06
COPS3-208ENST00000486032 LCE2BO14633 110 aa8.44□□□□□ -1.06
COPS3-208ENST00000486032 KCNK17Q96T54 332 aa8.44□□□□□ -1.06
COPS3-208ENST00000486032 PCGF6Q9BYE7 350 aa8.44□□□□□ -1.06
COPS3-208ENST00000486032 RTEL1-TNFRSF6BF6WH68 1400 aa8.44□□□□□ -1.06
COPS3-208ENST00000486032 KIF15Q9NS87 1388 aa8.43□□□□□ -1.06
COPS3-208ENST00000486032 LMTK3Q96Q04 1460 aa8.43□□□□□ -1.06
COPS3-208ENST00000486032 SHANK2Q9UPX8 1470 aa8.43□□□□□ -1.06
COPS3-208ENST00000486032 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.42□□□□□ -1.06
COPS3-208ENST00000486032 WNT2BQ93097 391 aa8.42□□□□□ -1.06
COPS3-208ENST00000486032 ZFP91Q96JP5 570 aaPredicted RBP8.42□□□□□ -1.06
COPS3-208ENST00000486032 DHX29Q7Z478 1369 aaKnown RBP8.42□□□□□ -1.06
COPS3-208ENST00000486032 CEP152O94986 1710 aa8.42□□□□□ -1.06
COPS3-208ENST00000486032 RNF17Q9BXT8 1623 aaKnown RBP8.41□□□□□ -1.06
COPS3-208ENST00000486032 NCOA1Q15788 1441 aa8.41□□□□□ -1.06
COPS3-208ENST00000486032 KIF3BO15066 747 aa8.41□□□□□ -1.06
COPS3-208ENST00000486032 GGT6Q6P531 493 aa8.41□□□□□ -1.06
COPS3-208ENST00000486032 FBXO22Q8NEZ5 403 aa8.41□□□□□ -1.06
COPS3-208ENST00000486032 TMC2Q8TDI7 906 aa8.41□□□□□ -1.06
COPS3-208ENST00000486032 ADGRL2O95490 1459 aa8.4□□□□□ -1.06
COPS3-208ENST00000486032 HSPA2P54652 639 aa8.4□□□□□ -1.06
COPS3-208ENST00000486032 RIOK3O14730 519 aaKnown RBP8.39□□□□□ -1.07
COPS3-208ENST00000486032 ITGBL1O95965 494 aaPredicted RBP8.39□□□□□ -1.07
COPS3-208ENST00000486032 TRIM52Q96A61 297 aa8.39□□□□□ -1.07
COPS3-208ENST00000486032 MROH2AA6NES4 1674 aa8.39□□□□□ -1.07
COPS3-208ENST00000486032 ABCC3O15438 1527 aa8.39□□□□□ -1.07
COPS3-208ENST00000486032 DUOX2Q9NRD8 1548 aa8.39□□□□□ -1.07
COPS3-208ENST00000486032 ANKRD50Q9ULJ7 1429 aa8.38□□□□□ -1.07
COPS3-208ENST00000486032 ROCK1Q13464 1354 aa8.38□□□□□ -1.07
COPS3-208ENST00000486032 GFRA3O60609 400 aa8.38□□□□□ -1.07
COPS3-208ENST00000486032 PTCD2Q8WV60 388 aaKnown RBP8.38□□□□□ -1.07
COPS3-208ENST00000486032 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
COPS3-208ENST00000486032 DEPDC5O75140 1603 aa8.38□□□□□ -1.07
COPS3-208ENST00000486032 EIF2AK4Q9P2K8 1649 aaKnown RBP8.38□□□□□ -1.07
COPS3-208ENST00000486032 NAIPQ13075 1403 aa8.37□□□□□ -1.07
COPS3-208ENST00000486032 PREX1Q8TCU6 1659 aa8.37□□□□□ -1.07
COPS3-208ENST00000486032 BHMG1C9JSJ3 638 aaPredicted RBP8.37□□□□□ -1.07
COPS3-208ENST00000486032 VGFO15240 615 aaPredicted RBP8.37□□□□□ -1.07
COPS3-208ENST00000486032 FBXO31Q5XUX0 539 aaPredicted RBP8.37□□□□□ -1.07
COPS3-208ENST00000486032 ESF1Q9H501 851 aaKnown RBP8.37□□□□□ -1.07
COPS3-208ENST00000486032 KDM5DQ9BY66 1539 aa8.37□□□□□ -1.07
COPS3-208ENST00000486032 SETD5Q9C0A6 1442 aa8.37□□□□□ -1.07
COPS3-208ENST00000486032 CAMSAP1Q5T5Y3 1602 aa8.36□□□□□ -1.07
COPS3-208ENST00000486032 MYO3AQ8NEV4 1616 aa8.36□□□□□ -1.07
COPS3-208ENST00000486032 PRDM15P57071 1507 aaPredicted RBP8.36□□□□□ -1.07
COPS3-208ENST00000486032 IFNLR1Q8IU57 520 aaPredicted RBP8.36□□□□□ -1.07
COPS3-208ENST00000486032 MRPL50Q8N5N7 158 aaKnown RBP8.36□□□□□ -1.07
COPS3-208ENST00000486032 HFM1A2PYH4 1435 aa8.36□□□□□ -1.07
COPS3-208ENST00000486032 ZMYM3Q14202 1370 aa8.35□□□□□ -1.07
COPS3-208ENST00000486032 GCC2Q8IWJ2 1684 aa8.35□□□□□ -1.07
COPS3-208ENST00000486032 ZNF787Q6DD87 383 aa8.35□□□□□ -1.07
COPS3-208ENST00000486032 ERBINQ96RT1 1412 aa8.35□□□□□ -1.07
COPS3-208ENST00000486032 STRCQ7RTU9 1775 aa8.35□□□□□ -1.07
COPS3-208ENST00000486032 VWDEQ8N2E2 1590 aa8.35□□□□□ -1.07
COPS3-208ENST00000486032 RAB3GAP2Q9H2M9 1393 aa8.35□□□□□ -1.07
COPS3-208ENST00000486032 KANK1Q14678 1352 aa8.34□□□□□ -1.07
COPS3-208ENST00000486032 WASHC2CQ9Y4E1 1318 aa8.33□□□□□ -1.08
COPS3-208ENST00000486032 CNTLNQ9NXG0 1405 aa8.33□□□□□ -1.08
COPS3-208ENST00000486032 NUP155O75694 1391 aa8.33□□□□□ -1.08
COPS3-208ENST00000486032 PZPP20742 1482 aa8.32□□□□□ -1.08
COPS3-208ENST00000486032 UNC13BO14795 1591 aa8.32□□□□□ -1.08
COPS3-208ENST00000486032 ZNF142P52746 1687 aaPredicted RBP8.32□□□□□ -1.08
COPS3-208ENST00000486032 ZC3H13Q5T200 1668 aaKnown RBP8.32□□□□□ -1.08
COPS3-208ENST00000486032 CFAP65Q6ZU64 1925 aaKnown RBP8.32□□□□□ -1.08
COPS3-208ENST00000486032 SYNMO15061 1565 aa8.31□□□□□ -1.08
COPS3-208ENST00000486032 CEP170BQ9Y4F5 1589 aaPredicted RBP8.31□□□□□ -1.08
COPS3-208ENST00000486032 TBC1D12O60347 775 aa8.31□□□□□ -1.08
COPS3-208ENST00000486032 ZNF775Q96BV0 537 aaPredicted RBP8.31□□□□□ -1.08
COPS3-208ENST00000486032 ERVK-7P63135 1459 aa8.31□□□□□ -1.08
COPS3-208ENST00000486032 SPATA31D1Q6ZQQ2 1576 aa8.31□□□□□ -1.08
COPS3-208ENST00000486032 UGGT1Q9NYU2 1555 aa8.31□□□□□ -1.08
COPS3-208ENST00000486032 NPATQ14207 1427 aa8.3□□□□□ -1.08
COPS3-208ENST00000486032 UHRF1BP1Q6BDS2 1440 aa8.3□□□□□ -1.08
COPS3-208ENST00000486032 MFRPQ9BY79 579 aa8.3□□□□□ -1.08
COPS3-208ENST00000486032 EFCAB6Q5THR3 1501 aa8.29□□□□□ -1.08
COPS3-208ENST00000486032 RNF25Q96BH1 459 aaPredicted RBP8.29□□□□□ -1.08
COPS3-208ENST00000486032 E9PCH4 1651 aa8.29□□□□□ -1.08
COPS3-208ENST00000486032 LMTK2Q8IWU2 1503 aa8.29□□□□□ -1.08
COPS3-208ENST00000486032 NEURL4Q96JN8 1562 aa8.28□□□□□ -1.08
COPS3-208ENST00000486032 TNRQ92752 1358 aa8.28□□□□□ -1.08
COPS3-208ENST00000486032 NRG2O14511 850 aaPredicted RBP8.28□□□□□ -1.08
COPS3-208ENST00000486032 MPHOSPH9Q99550 1183 aa8.28□□□□□ -1.08
COPS3-208ENST00000486032 PIK3C2BO00750 1634 aa8.28□□□□□ -1.08
COPS3-208ENST00000486032 IQGAP3Q86VI3 1631 aa8.28□□□□□ -1.08
COPS3-208ENST00000486032 FAM135AQ9P2D6 1515 aa8.28□□□□□ -1.08
COPS3-208ENST00000486032 KCNC4Q03721 635 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms