RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 C19orf44Q9H6X5 657 aa13.39□□□□□ -0.27
SHROOM3-207ENST00000485780 NBPF8Q3BBV2 869 aa13.38□□□□□ -0.27
SHROOM3-207ENST00000485780 NALCNQ8IZF0 1738 aa13.38□□□□□ -0.27
SHROOM3-207ENST00000485780 ROBO2Q9HCK4 1378 aa13.36□□□□□ -0.27
SHROOM3-207ENST00000485780 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
SHROOM3-207ENST00000485780 SIRT1Q96EB6 747 aa13.35□□□□□ -0.27
SHROOM3-207ENST00000485780 ADGRB2O60241 1585 aa13.35□□□□□ -0.27
SHROOM3-207ENST00000485780 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.35□□□□□ -0.27
SHROOM3-207ENST00000485780 DCCP43146 1447 aa13.34□□□□□ -0.27
SHROOM3-207ENST00000485780 NBPF1Q3BBV0 1214 aa13.34□□□□□ -0.27
SHROOM3-207ENST00000485780 ROCK2O75116 1388 aaKnown RBP13.33□□□□□ -0.27
SHROOM3-207ENST00000485780 ADGRL3Q9HAR2 1447 aa13.33□□□□□ -0.28
SHROOM3-207ENST00000485780 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
SHROOM3-207ENST00000485780 PHLPP1O60346 1717 aa13.32□□□□□ -0.28
SHROOM3-207ENST00000485780 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
SHROOM3-207ENST00000485780 SOCS7O14512 581 aa13.31□□□□□ -0.28
SHROOM3-207ENST00000485780 JCADQ9P266 1359 aa13.31□□□□□ -0.28
SHROOM3-207ENST00000485780 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
SHROOM3-207ENST00000485780 BRINP3Q76B58 766 aa13.29□□□□□ -0.28
SHROOM3-207ENST00000485780 FMN2Q9NZ56 1722 aa13.28□□□□□ -0.28
SHROOM3-207ENST00000485780 MST1RQ04912 1400 aa13.28□□□□□ -0.28
SHROOM3-207ENST00000485780 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
SHROOM3-207ENST00000485780 STK26Q9P289 416 aa13.27□□□□□ -0.29
SHROOM3-207ENST00000485780 EIF3AQ14152 1382 aaKnown RBP13.27□□□□□ -0.29
SHROOM3-207ENST00000485780 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
SHROOM3-207ENST00000485780 COL16A1Q07092 1604 aaPredicted RBP13.27□□□□□ -0.29
SHROOM3-207ENST00000485780 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
SHROOM3-207ENST00000485780 TRAK1Q9UPV9 953 aa13.26□□□□□ -0.29
SHROOM3-207ENST00000485780 WAPLQ7Z5K2 1190 aa13.25□□□□□ -0.29
SHROOM3-207ENST00000485780 CARD11Q9BXL7 1154 aa13.25□□□□□ -0.29
SHROOM3-207ENST00000485780 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
SHROOM3-207ENST00000485780 USP32Q8NFA0 1604 aa13.24□□□□□ -0.29
SHROOM3-207ENST00000485780 TULP4Q9NRJ4 1543 aa13.23□□□□□ -0.29
SHROOM3-207ENST00000485780 USP47Q96K76 1375 aa13.23□□□□□ -0.29
SHROOM3-207ENST00000485780 SPATA31A6Q5VVP1 1343 aa13.23□□□□□ -0.29
SHROOM3-207ENST00000485780 CENPJQ9HC77 1338 aaPredicted RBP13.23□□□□□ -0.29
SHROOM3-207ENST00000485780 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
SHROOM3-207ENST00000485780 TOPAZ1Q8N9V7 1692 aa13.22□□□□□ -0.29
SHROOM3-207ENST00000485780 LRRC59Q96AG4 307 aaKnown RBP13.21□□□□□ -0.29
SHROOM3-207ENST00000485780 RGPD8O14715 1765 aaPredicted RBP13.21□□□□□ -0.29
SHROOM3-207ENST00000485780 ITSN1Q15811 1721 aa13.21□□□□□ -0.3
SHROOM3-207ENST00000485780 NHSL1Q5SYE7 1610 aa13.21□□□□□ -0.3
SHROOM3-207ENST00000485780 POGKQ9P215 609 aa13.2□□□□□ -0.3
SHROOM3-207ENST00000485780 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
SHROOM3-207ENST00000485780 ANKARQ7Z5J8 1434 aa13.2□□□□□ -0.3
SHROOM3-207ENST00000485780 KIF1AQ12756 1690 aa13.19□□□□□ -0.3
SHROOM3-207ENST00000485780 ATP7BP35670 1465 aa13.19□□□□□ -0.3
SHROOM3-207ENST00000485780 NUTM2BA6NNL0 878 aaPredicted RBP13.19□□□□□ -0.3
SHROOM3-207ENST00000485780 NUTM2EB1AL46 878 aaPredicted RBP13.19□□□□□ -0.3
SHROOM3-207ENST00000485780 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
SHROOM3-207ENST00000485780 DDX17Q92841 729 aaKnown RBP13.19□□□□□ -0.3
SHROOM3-207ENST00000485780 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
SHROOM3-207ENST00000485780 RGS17Q9UGC6 210 aaPredicted RBP13.19□□□□□ -0.3
SHROOM3-207ENST00000485780 ESCO1Q5FWF5 840 aa13.18□□□□□ -0.3
SHROOM3-207ENST00000485780 TESK2Q96S53 571 aa13.18□□□□□ -0.3
SHROOM3-207ENST00000485780 LRP6O75581 1613 aa13.17□□□□□ -0.3
SHROOM3-207ENST00000485780 NUTM2FA1L443 756 aa13.17□□□□□ -0.3
SHROOM3-207ENST00000485780 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
SHROOM3-207ENST00000485780 MINK1Q8N4C8 1332 aaPredicted RBP13.16□□□□□ -0.3
SHROOM3-207ENST00000485780 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
SHROOM3-207ENST00000485780 ZEB1P37275 1124 aaPredicted RBP13.16□□□□□ -0.3
SHROOM3-207ENST00000485780 POTEAQ6S8J7 498 aa13.16□□□□□ -0.3
SHROOM3-207ENST00000485780 NPHP3Q7Z494 1330 aa13.15□□□□□ -0.3
SHROOM3-207ENST00000485780 ST20-MTHFSA0A0A6YYL1 179 aa13.15□□□□□ -0.3
SHROOM3-207ENST00000485780 ZNF772Q68DY9 489 aaPredicted RBP13.14□□□□□ -0.31
SHROOM3-207ENST00000485780 HIRIP3Q9BW71 556 aaPredicted RBP13.14□□□□□ -0.31
SHROOM3-207ENST00000485780 PNPLA6Q8IY17 1366 aa13.14□□□□□ -0.31
SHROOM3-207ENST00000485780 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
SHROOM3-207ENST00000485780 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
SHROOM3-207ENST00000485780 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
SHROOM3-207ENST00000485780 EIF4G2P78344 907 aaKnown RBP eCLIP13.13□□□□□ -0.31
SHROOM3-207ENST00000485780 EVC2Q86UK5 1308 aa13.13□□□□□ -0.31
SHROOM3-207ENST00000485780 MYOM1P52179 1685 aa13.12□□□□□ -0.31
SHROOM3-207ENST00000485780 PUS7Q96PZ0 661 aaKnown RBP13.12□□□□□ -0.31
SHROOM3-207ENST00000485780 FOXO3O43524 673 aa13.11□□□□□ -0.31
SHROOM3-207ENST00000485780 HSPA5P11021 654 aaKnown RBP13.11□□□□□ -0.31
SHROOM3-207ENST00000485780 C8orf37Q96NL8 207 aa13.11□□□□□ -0.31
SHROOM3-207ENST00000485780 CDK19Q9BWU1 502 aa13.11□□□□□ -0.31
SHROOM3-207ENST00000485780 AKAP12Q02952 1782 aa13.11□□□□□ -0.31
SHROOM3-207ENST00000485780 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
SHROOM3-207ENST00000485780 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
SHROOM3-207ENST00000485780 XPCQ01831 940 aaPredicted RBP13.1□□□□□ -0.31
SHROOM3-207ENST00000485780 TRPM3Q9HCF6 1732 aaPredicted RBP13.1□□□□□ -0.31
SHROOM3-207ENST00000485780 AFF2P51816 1311 aa13.1□□□□□ -0.31
SHROOM3-207ENST00000485780 PXDNQ92626 1479 aa13.09□□□□□ -0.31
SHROOM3-207ENST00000485780 POLR3AO14802 1390 aaPredicted RBP13.08□□□□□ -0.31
SHROOM3-207ENST00000485780 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
SHROOM3-207ENST00000485780 NRKQ7Z2Y5 1582 aa13.08□□□□□ -0.32
SHROOM3-207ENST00000485780 NUDT16Q96DE0 195 aaKnown RBP13.08□□□□□ -0.32
SHROOM3-207ENST00000485780 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
SHROOM3-207ENST00000485780 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
SHROOM3-207ENST00000485780 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
SHROOM3-207ENST00000485780 CCDC61Q9Y6R9 512 aa13.07□□□□□ -0.32
SHROOM3-207ENST00000485780 PPIP5K1Q6PFW1 1433 aa13.06□□□□□ -0.32
SHROOM3-207ENST00000485780 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
SHROOM3-207ENST00000485780 CD163L1Q9NR16 1453 aa13.06□□□□□ -0.32
SHROOM3-207ENST00000485780 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
SHROOM3-207ENST00000485780 RXRBP28702 533 aa13.06□□□□□ -0.32
SHROOM3-207ENST00000485780 SRPK2P78362 688 aaKnown RBP13.06□□□□□ -0.32
SHROOM3-207ENST00000485780 TMF1P82094 1093 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms