RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 NPHP3Q7Z494 1330 aa20.62■□□□□ 0.89
SMARCD3-211ENST00000485592 CCDC144AA2RUR9 1427 aa20.61■□□□□ 0.89
SMARCD3-211ENST00000485592 TRPC5Q9UL62 973 aaPredicted RBP20.61■□□□□ 0.89
SMARCD3-211ENST00000485592 ESCO1Q5FWF5 840 aa20.6■□□□□ 0.89
SMARCD3-211ENST00000485592 ATAD2Q6PL18 1390 aa20.59■□□□□ 0.89
SMARCD3-211ENST00000485592 IFT172Q9UG01 1749 aa20.58■□□□□ 0.89
SMARCD3-211ENST00000485592 MARF1Q9Y4F3 1742 aaKnown RBP20.58■□□□□ 0.89
SMARCD3-211ENST00000485592 FOXD1Q16676 465 aa20.58■□□□□ 0.89
SMARCD3-211ENST00000485592 FNBP4Q8N3X1 1017 aaPredicted RBP20.58■□□□□ 0.89
SMARCD3-211ENST00000485592 KNDC1Q76NI1 1749 aa20.58■□□□□ 0.88
SMARCD3-211ENST00000485592 LRPPRCP42704 1394 aaKnown RBP20.58■□□□□ 0.88
SMARCD3-211ENST00000485592 MYOM2P54296 1465 aa20.57■□□□□ 0.88
SMARCD3-211ENST00000485592 PXDNQ92626 1479 aa20.57■□□□□ 0.88
SMARCD3-211ENST00000485592 TECPR2O15040 1411 aa20.57■□□□□ 0.88
SMARCD3-211ENST00000485592 ANKRD30BQ9BXX2 1392 aa20.57■□□□□ 0.88
SMARCD3-211ENST00000485592 ADGRF5Q8IZF2 1346 aa20.56■□□□□ 0.88
SMARCD3-211ENST00000485592 ATRNO75882 1429 aa20.56■□□□□ 0.88
SMARCD3-211ENST00000485592 RGL3Q3MIN7 710 aa20.55■□□□□ 0.88
SMARCD3-211ENST00000485592 STK26Q9P289 416 aa20.54■□□□□ 0.88
SMARCD3-211ENST00000485592 SPATA31E1Q6ZUB1 1445 aa20.53■□□□□ 0.88
SMARCD3-211ENST00000485592 FOXO3O43524 673 aa20.53■□□□□ 0.88
SMARCD3-211ENST00000485592 KIF1AQ12756 1690 aa20.52■□□□□ 0.88
SMARCD3-211ENST00000485592 XPCQ01831 940 aaPredicted RBP20.52■□□□□ 0.88
SMARCD3-211ENST00000485592 WAPLQ7Z5K2 1190 aa20.52■□□□□ 0.88
SMARCD3-211ENST00000485592 FMN2Q9NZ56 1722 aa20.52■□□□□ 0.88
SMARCD3-211ENST00000485592 ABCC11Q96J66 1382 aa20.51■□□□□ 0.87
SMARCD3-211ENST00000485592 NUTM2FA1L443 756 aa20.51■□□□□ 0.87
SMARCD3-211ENST00000485592 PIK3C2GO75747 1445 aa20.51■□□□□ 0.87
SMARCD3-211ENST00000485592 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.5■□□□□ 0.87
SMARCD3-211ENST00000485592 BCL9LQ86UU0 1499 aa20.5■□□□□ 0.87
SMARCD3-211ENST00000485592 MPHOSPH9Q99550 1183 aa20.49■□□□□ 0.87
SMARCD3-211ENST00000485592 PLEKHH1Q9ULM0 1364 aa20.48■□□□□ 0.87
SMARCD3-211ENST00000485592 TMEM132EQ6IEE7 984 aa20.48■□□□□ 0.87
SMARCD3-211ENST00000485592 YTHDC2Q9H6S0 1430 aaKnown RBP20.47■□□□□ 0.87
SMARCD3-211ENST00000485592 GJD4Q96KN9 370 aaPredicted RBP20.45■□□□□ 0.86
SMARCD3-211ENST00000485592 USP32Q8NFA0 1604 aa20.44■□□□□ 0.86
SMARCD3-211ENST00000485592 SPATA31A3Q5VYP0 1347 aa20.44■□□□□ 0.86
SMARCD3-211ENST00000485592 CCDC125Q86Z20 511 aa20.43■□□□□ 0.86
SMARCD3-211ENST00000485592 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
SMARCD3-211ENST00000485592 SLIT2O94813 1529 aa20.42■□□□□ 0.86
SMARCD3-211ENST00000485592 RGPD8O14715 1765 aaPredicted RBP20.41■□□□□ 0.86
SMARCD3-211ENST00000485592 HAP1P54257 671 aaPredicted RBP20.41■□□□□ 0.86
SMARCD3-211ENST00000485592 KRT28Q7Z3Y7 464 aa20.41■□□□□ 0.86
SMARCD3-211ENST00000485592 UNC5CLQ8IV45 518 aa20.41■□□□□ 0.86
SMARCD3-211ENST00000485592 SIRT1Q96EB6 747 aa20.41■□□□□ 0.86
SMARCD3-211ENST00000485592 ZRANB1Q9UGI0 708 aa20.41■□□□□ 0.86
SMARCD3-211ENST00000485592 TNS3Q68CZ2 1445 aa20.4■□□□□ 0.86
SMARCD3-211ENST00000485592 DHX57Q6P158 1386 aaKnown RBP20.4■□□□□ 0.86
SMARCD3-211ENST00000485592 RALGAPBQ86X10 1494 aa20.4■□□□□ 0.86
SMARCD3-211ENST00000485592 GLI3P10071 1580 aa20.39■□□□□ 0.85
SMARCD3-211ENST00000485592 PSME1Q06323 249 aa20.39■□□□□ 0.85
SMARCD3-211ENST00000485592 NRXN1Q9ULB1 1477 aa20.38■□□□□ 0.85
SMARCD3-211ENST00000485592 C14orf93Q9H972 538 aaKnown RBP20.38■□□□□ 0.85
SMARCD3-211ENST00000485592 PHF8Q9UPP1 1060 aa20.38■□□□□ 0.85
SMARCD3-211ENST00000485592 PLCH1Q4KWH8 1693 aa20.36■□□□□ 0.85
SMARCD3-211ENST00000485592 NWD2Q9ULI1 1742 aa20.36■□□□□ 0.85
SMARCD3-211ENST00000485592 CFAP70Q5T0N1 1121 aa20.35■□□□□ 0.85
SMARCD3-211ENST00000485592 ABCA3Q99758 1704 aa20.35■□□□□ 0.85
SMARCD3-211ENST00000485592 SBNO1A3KN83 1393 aa20.34■□□□□ 0.85
SMARCD3-211ENST00000485592 PRAM1Q96QH2 718 aa20.34■□□□□ 0.85
SMARCD3-211ENST00000485592 EP400Q96L91 3159 aa20.34■□□□□ 0.85
SMARCD3-211ENST00000485592 BLMP54132 1417 aaPredicted RBP20.34■□□□□ 0.85
SMARCD3-211ENST00000485592 BRWD3Q6RI45 1802 aa20.34■□□□□ 0.85
SMARCD3-211ENST00000485592 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
SMARCD3-211ENST00000485592 DLC1Q96QB1 1528 aa20.33■□□□□ 0.85
SMARCD3-211ENST00000485592 SAFB2Q14151 953 aaKnown RBP eCLIP20.33■□□□□ 0.85
SMARCD3-211ENST00000485592 LMOD2Q6P5Q4 547 aa20.33■□□□□ 0.85
SMARCD3-211ENST00000485592 POGKQ9P215 609 aa20.32■□□□□ 0.84
SMARCD3-211ENST00000485592 ADGRB2O60241 1585 aa20.31■□□□□ 0.84
SMARCD3-211ENST00000485592 ANKARQ7Z5J8 1434 aa20.31■□□□□ 0.84
SMARCD3-211ENST00000485592 PLEKHG5O94827 1062 aa20.31■□□□□ 0.84
SMARCD3-211ENST00000485592 VPS72Q15906 364 aa20.31■□□□□ 0.84
SMARCD3-211ENST00000485592 CABLES1Q8TDN4 633 aa20.31■□□□□ 0.84
SMARCD3-211ENST00000485592 SF3B2Q13435 895 aaKnown RBP20.3■□□□□ 0.84
SMARCD3-211ENST00000485592 CCDC9Q9Y3X0 531 aaKnown RBP20.3■□□□□ 0.84
SMARCD3-211ENST00000485592 SEPT12Q8IYM1 358 aa20.29■□□□□ 0.84
SMARCD3-211ENST00000485592 PMFBP1Q8TBY8 1022 aa20.28■□□□□ 0.84
SMARCD3-211ENST00000485592 EIF3AQ14152 1382 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-211ENST00000485592 ADGRB1O14514 1584 aa20.26■□□□□ 0.83
SMARCD3-211ENST00000485592 TRPM3Q9HCF6 1732 aaPredicted RBP20.26■□□□□ 0.83
SMARCD3-211ENST00000485592 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
SMARCD3-211ENST00000485592 KRT27Q7Z3Y8 459 aa20.24■□□□□ 0.83
SMARCD3-211ENST00000485592 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
SMARCD3-211ENST00000485592 NRAPQ86VF7 1730 aa20.24■□□□□ 0.83
SMARCD3-211ENST00000485592 RAB3GAP2Q9H2M9 1393 aa20.23■□□□□ 0.83
SMARCD3-211ENST00000485592 TULP4Q9NRJ4 1543 aa20.23■□□□□ 0.83
SMARCD3-211ENST00000485592 ALS2Q96Q42 1657 aa20.23■□□□□ 0.83
SMARCD3-211ENST00000485592 A0A0G2JS52 829 aa20.23■□□□□ 0.83
SMARCD3-211ENST00000485592 ONECUT3O60422 494 aaPredicted RBP20.23■□□□□ 0.83
SMARCD3-211ENST00000485592 MYT1Q01538 1121 aa20.23■□□□□ 0.83
SMARCD3-211ENST00000485592 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
SMARCD3-211ENST00000485592 COL14A1Q05707 1796 aaKnown RBP20.22■□□□□ 0.83
SMARCD3-211ENST00000485592 HIRIP3Q9BW71 556 aaPredicted RBP20.22■□□□□ 0.83
SMARCD3-211ENST00000485592 FAM83GA6ND36 823 aa20.21■□□□□ 0.83
SMARCD3-211ENST00000485592 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
SMARCD3-211ENST00000485592 BTG4Q9NY30 223 aa20.19■□□□□ 0.82
SMARCD3-211ENST00000485592 ITSN1Q15811 1721 aa20.19■□□□□ 0.82
SMARCD3-211ENST00000485592 SRCAPQ6ZRS2 3230 aa20.18■□□□□ 0.82
SMARCD3-211ENST00000485592 KDM2AQ9Y2K7 1162 aa20.18■□□□□ 0.82
SMARCD3-211ENST00000485592 WASLO00401 505 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms