RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 CDC42BPGQ6DT37 1551 aa38.02■■■■□ 3.68
HLA-F-227ENST00000485513 TMEM132EQ6IEE7 984 aa38.01■■■■□ 3.68
HLA-F-227ENST00000485513 ABCC11Q96J66 1382 aa38■■■■□ 3.67
HLA-F-227ENST00000485513 KNDC1Q76NI1 1749 aa37.98■■■■□ 3.67
HLA-F-227ENST00000485513 WAPLQ7Z5K2 1190 aa37.98■■■■□ 3.67
HLA-F-227ENST00000485513 SOS2Q07890 1332 aaPredicted RBP37.97■■■■□ 3.67
HLA-F-227ENST00000485513 YTHDC2Q9H6S0 1430 aaKnown RBP37.94■■■■□ 3.66
HLA-F-227ENST00000485513 AFF2P51816 1311 aa37.93■■■■□ 3.66
HLA-F-227ENST00000485513 MYOM2P54296 1465 aa37.92■■■■□ 3.66
HLA-F-227ENST00000485513 ESCO1Q5FWF5 840 aa37.92■■■■□ 3.66
HLA-F-227ENST00000485513 NRXN1Q9ULB1 1477 aa37.91■■■■□ 3.66
HLA-F-227ENST00000485513 C14orf93Q9H972 538 aaKnown RBP37.91■■■■□ 3.66
HLA-F-227ENST00000485513 PLEKHH1Q9ULM0 1364 aa37.91■■■■□ 3.66
HLA-F-227ENST00000485513 C8orf37Q96NL8 207 aa37.89■■■■□ 3.66
HLA-F-227ENST00000485513 RXRBP28702 533 aa37.87■■■■□ 3.65
HLA-F-227ENST00000485513 NPHP3Q7Z494 1330 aa37.87■■■■□ 3.65
HLA-F-227ENST00000485513 CFAP70Q5T0N1 1121 aa37.86■■■■□ 3.65
HLA-F-227ENST00000485513 NUTM2FA1L443 756 aa37.84■■■■□ 3.65
HLA-F-227ENST00000485513 SIRT1Q96EB6 747 aa37.84■■■■□ 3.65
HLA-F-227ENST00000485513 DHX57Q6P158 1386 aaKnown RBP37.83■■■■□ 3.65
HLA-F-227ENST00000485513 ADAMTS2O95450 1211 aa37.82■■■■□ 3.64
HLA-F-227ENST00000485513 FOXO3O43524 673 aa37.8■■■■□ 3.64
HLA-F-227ENST00000485513 FMN2Q9NZ56 1722 aa37.8■■■■□ 3.64
HLA-F-227ENST00000485513 PXDNQ92626 1479 aa37.79■■■■□ 3.64
HLA-F-227ENST00000485513 HRCP23327 699 aa37.79■■■■□ 3.64
HLA-F-227ENST00000485513 NGLY1Q96IV0 654 aa37.78■■■■□ 3.64
HLA-F-227ENST00000485513 COL22A1Q8NFW1 1626 aaPredicted RBP37.78■■■■□ 3.64
HLA-F-227ENST00000485513 CDK12Q9NYV4 1490 aaPredicted RBP37.76■■■■□ 3.63
HLA-F-227ENST00000485513 XPCQ01831 940 aaPredicted RBP37.75■■■■□ 3.63
HLA-F-227ENST00000485513 QTRT2Q9H974 415 aaKnown RBP37.74■■■■□ 3.63
HLA-F-227ENST00000485513 PRAM1Q96QH2 718 aa37.71■■■■□ 3.63
HLA-F-227ENST00000485513 KIF1AQ12756 1690 aa37.7■■■■□ 3.63
HLA-F-227ENST00000485513 RBM6P78332 1123 aaKnown RBP37.69■■■■□ 3.62
HLA-F-227ENST00000485513 DLC1Q96QB1 1528 aa37.68■■■■□ 3.62
HLA-F-227ENST00000485513 SAFB2Q14151 953 aaKnown RBP eCLIP37.68■■■■□ 3.62
HLA-F-227ENST00000485513 KDM2AQ9Y2K7 1162 aa37.68■■■■□ 3.62
HLA-F-227ENST00000485513 DCAF11Q8TEB1 546 aa37.67■■■■□ 3.62
HLA-F-227ENST00000485513 ADGRB1O14514 1584 aa37.66■■■■□ 3.62
HLA-F-227ENST00000485513 POGKQ9P215 609 aa37.65■■■■□ 3.62
HLA-F-227ENST00000485513 RGPD8O14715 1765 aaPredicted RBP37.65■■■■□ 3.62
HLA-F-227ENST00000485513 USP21Q9UK80 565 aa37.64■■■■□ 3.62
HLA-F-227ENST00000485513 UPF1Q92900 1129 aaKnown RBP eCLIP37.63■■■■□ 3.61
HLA-F-227ENST00000485513 FNBP4Q8N3X1 1017 aaPredicted RBP37.62■■■■□ 3.61
HLA-F-227ENST00000485513 STAC3Q96MF2 364 aa37.62■■■■□ 3.61
HLA-F-227ENST00000485513 RGS12O14924 1447 aa37.61■■■■□ 3.61
HLA-F-227ENST00000485513 PHF8Q9UPP1 1060 aa37.6■■■■□ 3.61
HLA-F-227ENST00000485513 KRT28Q7Z3Y7 464 aa37.59■■■■□ 3.61
HLA-F-227ENST00000485513 TRAK1Q9UPV9 953 aa37.59■■■■□ 3.61
HLA-F-227ENST00000485513 SPATA31A3Q5VYP0 1347 aa37.59■■■■□ 3.61
HLA-F-227ENST00000485513 MARF1Q9Y4F3 1742 aaKnown RBP37.58■■■■□ 3.61
HLA-F-227ENST00000485513 TRPC5Q9UL62 973 aaPredicted RBP37.57■■■■□ 3.6
HLA-F-227ENST00000485513 ADGRB2O60241 1585 aa37.55■■■■□ 3.6
HLA-F-227ENST00000485513 PSME1Q06323 249 aa37.52■■■■□ 3.6
HLA-F-227ENST00000485513 ATRNO75882 1429 aa37.52■■■■□ 3.6
HLA-F-227ENST00000485513 ANKARQ7Z5J8 1434 aa37.52■■■■□ 3.6
HLA-F-227ENST00000485513 USP32Q8NFA0 1604 aa37.5■■■■□ 3.59
HLA-F-227ENST00000485513 HIRIP3Q9BW71 556 aaPredicted RBP37.49■■■■□ 3.59
HLA-F-227ENST00000485513 TNS3Q68CZ2 1445 aa37.49■■■■□ 3.59
HLA-F-227ENST00000485513 MINK1Q8N4C8 1332 aaPredicted RBP37.48■■■■□ 3.59
HLA-F-227ENST00000485513 BCL9LQ86UU0 1499 aa37.47■■■■□ 3.59
HLA-F-227ENST00000485513 PMFBP1Q8TBY8 1022 aa37.45■■■■□ 3.59
HLA-F-227ENST00000485513 SBNO1A3KN83 1393 aa37.44■■■■□ 3.58
HLA-F-227ENST00000485513 EIF3AQ14152 1382 aaKnown RBP37.43■■■■□ 3.58
HLA-F-227ENST00000485513 HAP1P54257 671 aaPredicted RBP37.4■■■■□ 3.58
HLA-F-227ENST00000485513 WASLO00401 505 aaPredicted RBP37.39■■■■□ 3.58
HLA-F-227ENST00000485513 LMOD2Q6P5Q4 547 aa37.39■■■■□ 3.58
HLA-F-227ENST00000485513 TULP4Q9NRJ4 1543 aa37.39■■■■□ 3.58
HLA-F-227ENST00000485513 ARHGEF10O15013 1369 aa37.39■■■■□ 3.58
HLA-F-227ENST00000485513 ARHGEF28Q8N1W1 1705 aaKnown RBP37.39■■■■□ 3.58
HLA-F-227ENST00000485513 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.38■■■■□ 3.57
HLA-F-227ENST00000485513 PRR36Q9H6K5 1346 aa37.36■■■■□ 3.57
HLA-F-227ENST00000485513 SLIT2O94813 1529 aa37.36■■■■□ 3.57
HLA-F-227ENST00000485513 CABLES1Q8TDN4 633 aa37.36■■■■□ 3.57
HLA-F-227ENST00000485513 PLEKHG5O94827 1062 aa37.35■■■■□ 3.57
HLA-F-227ENST00000485513 UNC5CLQ8IV45 518 aa37.35■■■■□ 3.57
HLA-F-227ENST00000485513 GJD4Q96KN9 370 aaPredicted RBP37.35■■■■□ 3.57
HLA-F-227ENST00000485513 ATAD2Q6PL18 1390 aa37.34■■■■□ 3.57
HLA-F-227ENST00000485513 GPRASP1Q5JY77 1395 aa37.32■■■■□ 3.57
HLA-F-227ENST00000485513 ABCA3Q99758 1704 aa37.32■■■■□ 3.56
HLA-F-227ENST00000485513 TRPM3Q9HCF6 1732 aaPredicted RBP37.31■■■■□ 3.56
HLA-F-227ENST00000485513 KIAA1210Q9ULL0 1709 aa37.31■■■■□ 3.56
HLA-F-227ENST00000485513 RALGAPBQ86X10 1494 aa37.26■■■■□ 3.55
HLA-F-227ENST00000485513 NGDNQ8NEJ9 315 aaKnown RBP37.25■■■■□ 3.55
HLA-F-227ENST00000485513 ALS2Q96Q42 1657 aa37.25■■■■□ 3.55
HLA-F-227ENST00000485513 GLI3P10071 1580 aa37.24■■■■□ 3.55
HLA-F-227ENST00000485513 PLCH1Q4KWH8 1693 aa37.24■■■■□ 3.55
HLA-F-227ENST00000485513 ITSN1Q15811 1721 aa37.24■■■■□ 3.55
HLA-F-227ENST00000485513 NWD2Q9ULI1 1742 aa37.22■■■■□ 3.55
HLA-F-227ENST00000485513 ATP7BP35670 1465 aa37.22■■■■□ 3.55
HLA-F-227ENST00000485513 NUDT16Q96DE0 195 aaKnown RBP37.21■■■■□ 3.55
HLA-F-227ENST00000485513 NBPF1Q3BBV0 1214 aa37.2■■■■□ 3.55
HLA-F-227ENST00000485513 CDK19Q9BWU1 502 aa37.18■■■■□ 3.54
HLA-F-227ENST00000485513 FAM83GA6ND36 823 aa37.17■■■■□ 3.54
HLA-F-227ENST00000485513 VPS72Q15906 364 aa37.17■■■■□ 3.54
HLA-F-227ENST00000485513 PAK3O75914 559 aaPredicted RBP37.16■■■■□ 3.54
HLA-F-227ENST00000485513 EP400Q96L91 3159 aa37.13■■■■□ 3.54
HLA-F-227ENST00000485513 CCDC9Q9Y3X0 531 aaKnown RBP37.13■■■■□ 3.53
HLA-F-227ENST00000485513 TOPAZ1Q8N9V7 1692 aa37.09■■■■□ 3.53
HLA-F-227ENST00000485513 CRYBG1Q9Y4K1 1723 aa37.08■■■■□ 3.53
HLA-F-227ENST00000485513 L3MBTL2Q969R5 705 aa37.08■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms