RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 TRIM67Q6ZTA4 783 aa7.89□□□□□ -1.15
SFPQ-209ENST00000485454 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
SFPQ-209ENST00000485454 GUCA2AQ02747 115 aa7.88□□□□□ -1.15
SFPQ-209ENST00000485454 DIXDC1Q155Q3 683 aa7.88□□□□□ -1.15
SFPQ-209ENST00000485454 ZNF697Q5TEC3 545 aa7.88□□□□□ -1.15
SFPQ-209ENST00000485454 LIAT1Q6ZQX7 453 aa7.87□□□□□ -1.15
SFPQ-209ENST00000485454 FAM160A2Q8N612 972 aaPredicted RBP7.87□□□□□ -1.15
SFPQ-209ENST00000485454 MOXD2PA6NHM9 499 aa7.86□□□□□ -1.15
SFPQ-209ENST00000485454 FDX1P10109 184 aa7.86□□□□□ -1.15
SFPQ-209ENST00000485454 PRR20EP86478 221 aa7.86□□□□□ -1.15
SFPQ-209ENST00000485454 PRR20CP86479 221 aa7.86□□□□□ -1.15
SFPQ-209ENST00000485454 PRR20DP86480 221 aa7.86□□□□□ -1.15
SFPQ-209ENST00000485454 PRR20BP86481 221 aa7.86□□□□□ -1.15
SFPQ-209ENST00000485454 PRR20AP86496 221 aa7.86□□□□□ -1.15
SFPQ-209ENST00000485454 MSS51Q4VC12 460 aa7.86□□□□□ -1.15
SFPQ-209ENST00000485454 PKDCCQ504Y2 493 aa7.86□□□□□ -1.15
SFPQ-209ENST00000485454 TBC1D2Q9BYX2 928 aa7.86□□□□□ -1.15
SFPQ-209ENST00000485454 NDUFV2P19404 249 aa7.85□□□□□ -1.15
SFPQ-209ENST00000485454 TPRNQ4KMQ1 711 aa7.85□□□□□ -1.15
SFPQ-209ENST00000485454 PLA2G2CQ5R387 149 aa7.85□□□□□ -1.15
SFPQ-209ENST00000485454 USB1Q9BQ65 265 aaKnown RBP7.85□□□□□ -1.15
SFPQ-209ENST00000485454 ZNF787Q6DD87 383 aa7.84□□□□□ -1.15
SFPQ-209ENST00000485454 PRDM9Q9NQV7 894 aa7.84□□□□□ -1.15
SFPQ-209ENST00000485454 PCDHGC3Q9UN70 934 aa7.84□□□□□ -1.15
SFPQ-209ENST00000485454 TNFRSF10AO00220 468 aa7.83□□□□□ -1.16
SFPQ-209ENST00000485454 SYMPKQ92797 1274 aaKnown RBP7.83□□□□□ -1.16
SFPQ-209ENST00000485454 KDM4CQ9H3R0 1056 aa7.83□□□□□ -1.16
SFPQ-209ENST00000485454 GPBP1L1Q9HC44 474 aaPredicted RBP7.83□□□□□ -1.16
SFPQ-209ENST00000485454 GDF9O60383 454 aa7.82□□□□□ -1.16
SFPQ-209ENST00000485454 GJA5P36382 358 aa7.82□□□□□ -1.16
SFPQ-209ENST00000485454 RSBN1LQ6PCB5 846 aaPredicted RBP7.82□□□□□ -1.16
SFPQ-209ENST00000485454 RETREG3Q86VR2 466 aa7.82□□□□□ -1.16
SFPQ-209ENST00000485454 FAM187AA6NFU0 413 aa7.81□□□□□ -1.16
SFPQ-209ENST00000485454 C6orf229H3BNL8 230 aa7.81□□□□□ -1.16
SFPQ-209ENST00000485454 SPTLC1O15269 473 aa7.81□□□□□ -1.16
SFPQ-209ENST00000485454 DGAT1O75907 488 aa7.81□□□□□ -1.16
SFPQ-209ENST00000485454 MMP16P51512 607 aa7.81□□□□□ -1.16
SFPQ-209ENST00000485454 FCF1Q9Y324 198 aaKnown RBP7.81□□□□□ -1.16
SFPQ-209ENST00000485454 MYT1Q01538 1121 aa7.8□□□□□ -1.16
SFPQ-209ENST00000485454 MYSM1Q5VVJ2 828 aa7.8□□□□□ -1.16
SFPQ-209ENST00000485454 RIC3Q7Z5B4 369 aa7.8□□□□□ -1.16
SFPQ-209ENST00000485454 DXOO77932 396 aaKnown RBP7.79□□□□□ -1.16
SFPQ-209ENST00000485454 MTMR2Q13614 643 aa7.79□□□□□ -1.16
SFPQ-209ENST00000485454 RSPH6AQ9H0K4 717 aa7.79□□□□□ -1.16
SFPQ-209ENST00000485454 SPDYE5A6NIY4 337 aa7.78□□□□□ -1.16
SFPQ-209ENST00000485454 JUNDP17535 347 aa7.78□□□□□ -1.16
SFPQ-209ENST00000485454 FOXC1Q12948 553 aa7.78□□□□□ -1.16
SFPQ-209ENST00000485454 DDRGK1Q96HY6 314 aa7.78□□□□□ -1.16
SFPQ-209ENST00000485454 RPIAP49247 311 aa7.77□□□□□ -1.17
SFPQ-209ENST00000485454 FAM117AQ9C073 453 aa7.77□□□□□ -1.17
SFPQ-209ENST00000485454 PCDHB15Q9Y5E8 787 aa7.77□□□□□ -1.17
SFPQ-209ENST00000485454 NEUROD2Q15784 382 aa7.76□□□□□ -1.17
SFPQ-209ENST00000485454 TUSC1Q2TAM9 212 aa7.76□□□□□ -1.17
SFPQ-209ENST00000485454 PRPF38BQ5VTL8 546 aaKnown RBP7.76□□□□□ -1.17
SFPQ-209ENST00000485454 ZBTB3Q9H5J0 574 aa7.76□□□□□ -1.17
SFPQ-209ENST00000485454 LIMD1Q9UGP4 676 aa7.76□□□□□ -1.17
SFPQ-209ENST00000485454 ZBTB24O43167 697 aaPredicted RBP7.75□□□□□ -1.17
SFPQ-209ENST00000485454 CD2BP2O95400 341 aaKnown RBP7.75□□□□□ -1.17
SFPQ-209ENST00000485454 HRCP23327 699 aa7.75□□□□□ -1.17
SFPQ-209ENST00000485454 CLK2P49760 499 aaKnown RBP7.75□□□□□ -1.17
SFPQ-209ENST00000485454 CSPP1Q1MSJ5 1256 aa7.75□□□□□ -1.17
SFPQ-209ENST00000485454 PRR7Q8TB68 274 aa7.75□□□□□ -1.17
SFPQ-209ENST00000485454 PKD2L1Q9P0L9 805 aa7.75□□□□□ -1.17
SFPQ-209ENST00000485454 CCDC24Q8N4L8 307 aa7.74□□□□□ -1.17
SFPQ-209ENST00000485454 ZNF775Q96BV0 537 aaPredicted RBP7.74□□□□□ -1.17
SFPQ-209ENST00000485454 PLEKHG3A1L390 1219 aa7.73□□□□□ -1.17
SFPQ-209ENST00000485454 DESI1Q6ICB0 168 aa7.73□□□□□ -1.17
SFPQ-209ENST00000485454 CABLES1Q8TDN4 633 aa7.73□□□□□ -1.17
SFPQ-209ENST00000485454 POLR3EQ9NVU0 708 aa7.73□□□□□ -1.17
SFPQ-209ENST00000485454 BRPF1P55201 1214 aaPredicted RBP7.72□□□□□ -1.17
SFPQ-209ENST00000485454 SKIV2LQ15477 1246 aaKnown RBP7.72□□□□□ -1.17
SFPQ-209ENST00000485454 QPCTQ16769 361 aa7.72□□□□□ -1.17
SFPQ-209ENST00000485454 SH3D19Q5HYK7 790 aa7.72□□□□□ -1.17
SFPQ-209ENST00000485454 NUDT12Q9BQG2 462 aa7.72□□□□□ -1.17
SFPQ-209ENST00000485454 NUTM2BA6NNL0 878 aaPredicted RBP7.71□□□□□ -1.18
SFPQ-209ENST00000485454 NUTM2EB1AL46 878 aaPredicted RBP7.71□□□□□ -1.18
SFPQ-209ENST00000485454 CFAP99D6REC4 459 aa7.71□□□□□ -1.18
SFPQ-209ENST00000485454 ST8SIA5O15466 376 aa7.71□□□□□ -1.18
SFPQ-209ENST00000485454 LILRB3O75022 631 aa7.71□□□□□ -1.18
SFPQ-209ENST00000485454 PTPRNQ16849 979 aa7.71□□□□□ -1.18
SFPQ-209ENST00000485454 NUTM2DQ5VT03 806 aaPredicted RBP7.71□□□□□ -1.18
SFPQ-209ENST00000485454 NUTM2AQ8IVF1 878 aaPredicted RBP7.71□□□□□ -1.18
SFPQ-209ENST00000485454 CYP4X1Q8N118 509 aa7.71□□□□□ -1.18
SFPQ-209ENST00000485454 AAASQ9NRG9 546 aa7.71□□□□□ -1.18
SFPQ-209ENST00000485454 POTECB2RU33 542 aa7.7□□□□□ -1.18
SFPQ-209ENST00000485454 CCNYL3P0C7X3 344 aa7.7□□□□□ -1.18
SFPQ-209ENST00000485454 TOR4AQ9NXH8 423 aa7.7□□□□□ -1.18
SFPQ-209ENST00000485454 PRKCSHP14314 528 aaPredicted RBP7.69□□□□□ -1.18
SFPQ-209ENST00000485454 TRIM32Q13049 653 aa7.69□□□□□ -1.18
SFPQ-209ENST00000485454 RTL5Q5HYW3 569 aaPredicted RBP7.68□□□□□ -1.18
SFPQ-209ENST00000485454 LYPD8Q6UX82 237 aa7.68□□□□□ -1.18
SFPQ-209ENST00000485454 CRIPAKQ8N1N5 446 aa7.68□□□□□ -1.18
SFPQ-209ENST00000485454 EVA1BQ9NVM1 165 aa7.68□□□□□ -1.18
SFPQ-209ENST00000485454 ATP1B4Q9UN42 357 aaPredicted RBP7.68□□□□□ -1.18
SFPQ-209ENST00000485454 TTC24A2A3L6 582 aaPredicted RBP7.67□□□□□ -1.18
SFPQ-209ENST00000485454 AVPP01185 164 aa7.67□□□□□ -1.18
SFPQ-209ENST00000485454 PTCRAQ6ISU1 281 aaPredicted RBP7.67□□□□□ -1.18
SFPQ-209ENST00000485454 PROCA1Q8NCQ7 364 aaPredicted RBP7.67□□□□□ -1.18
SFPQ-209ENST00000485454 IL27Q8NEV9 243 aa7.67□□□□□ -1.18
SFPQ-209ENST00000485454 TSC1Q92574 1164 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms