RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 RIMS2Q9UQ26 1411 aa19.48■□□□□ 0.71
TTC3-219ENST00000485402 PANK3Q9H999 370 aa19.48■□□□□ 0.71
TTC3-219ENST00000485402 RALBP1Q15311 655 aa19.47■□□□□ 0.71
TTC3-219ENST00000485402 KIAA1210Q9ULL0 1709 aa19.46■□□□□ 0.71
TTC3-219ENST00000485402 IQGAP1P46940 1657 aa19.46■□□□□ 0.71
TTC3-219ENST00000485402 CDCA8Q53HL2 280 aa19.46■□□□□ 0.71
TTC3-219ENST00000485402 HDGFP51858 240 aaKnown RBP19.44■□□□□ 0.7
TTC3-219ENST00000485402 PPM1GO15355 546 aaPredicted RBP19.44■□□□□ 0.7
TTC3-219ENST00000485402 NLRP13Q86W25 1043 aa19.44■□□□□ 0.7
TTC3-219ENST00000485402 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.44■□□□□ 0.7
TTC3-219ENST00000485402 ZFYVE9O95405 1425 aa19.44■□□□□ 0.7
TTC3-219ENST00000485402 POGKQ9P215 609 aa19.43■□□□□ 0.7
TTC3-219ENST00000485402 BRPF3Q9ULD4 1205 aa19.43■□□□□ 0.7
TTC3-219ENST00000485402 C20orf194Q5TEA3 1177 aa19.42■□□□□ 0.7
TTC3-219ENST00000485402 FER1L4A9Z1Z3 1794 aa19.41■□□□□ 0.7
TTC3-219ENST00000485402 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
TTC3-219ENST00000485402 ADGRB1O14514 1584 aa19.41■□□□□ 0.7
TTC3-219ENST00000485402 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
TTC3-219ENST00000485402 RGS3P49796 1198 aa19.4■□□□□ 0.7
TTC3-219ENST00000485402 PRAM1Q96QH2 718 aa19.4■□□□□ 0.7
TTC3-219ENST00000485402 KTN1Q86UP2 1357 aaKnown RBP19.39■□□□□ 0.69
TTC3-219ENST00000485402 SETBP1Q9Y6X0 1596 aa19.39■□□□□ 0.69
TTC3-219ENST00000485402 SLC24A1O60721 1099 aa19.39■□□□□ 0.69
TTC3-219ENST00000485402 LTKP29376 864 aa19.39■□□□□ 0.69
TTC3-219ENST00000485402 MINK1Q8N4C8 1332 aaPredicted RBP19.39■□□□□ 0.69
TTC3-219ENST00000485402 TMEM2Q9UHN6 1383 aa19.38■□□□□ 0.69
TTC3-219ENST00000485402 EIF5BO60841 1220 aaKnown RBP19.38■□□□□ 0.69
TTC3-219ENST00000485402 EID1Q9Y6B2 187 aa19.38■□□□□ 0.69
TTC3-219ENST00000485402 C3P01024 1663 aa19.38■□□□□ 0.69
TTC3-219ENST00000485402 MS4A1P11836 297 aa19.37■□□□□ 0.69
TTC3-219ENST00000485402 PER1O15534 1290 aaPredicted RBP19.37■□□□□ 0.69
TTC3-219ENST00000485402 SLC26A8Q96RN1 970 aa19.37■□□□□ 0.69
TTC3-219ENST00000485402 KNSTRNQ9Y448 316 aa19.37■□□□□ 0.69
TTC3-219ENST00000485402 WAPLQ7Z5K2 1190 aa19.36■□□□□ 0.69
TTC3-219ENST00000485402 USP35Q9P2H5 1018 aa19.36■□□□□ 0.69
TTC3-219ENST00000485402 LRPPRCP42704 1394 aaKnown RBP19.36■□□□□ 0.69
TTC3-219ENST00000485402 THEMISQ8N1K5 641 aaPredicted RBP19.36■□□□□ 0.69
TTC3-219ENST00000485402 DDRGK1Q96HY6 314 aa19.36■□□□□ 0.69
TTC3-219ENST00000485402 YTHDC2Q9H6S0 1430 aaKnown RBP19.35■□□□□ 0.69
TTC3-219ENST00000485402 PDE3BQ13370 1112 aa19.35■□□□□ 0.69
TTC3-219ENST00000485402 NFKBIBQ15653 356 aa19.35■□□□□ 0.69
TTC3-219ENST00000485402 CABP2Q9NPB3 220 aa19.35■□□□□ 0.69
TTC3-219ENST00000485402 ALKQ9UM73 1620 aa19.35■□□□□ 0.69
TTC3-219ENST00000485402 SRPK2P78362 688 aaKnown RBP19.34■□□□□ 0.69
TTC3-219ENST00000485402 NLRP1Q9C000 1473 aa19.34■□□□□ 0.69
TTC3-219ENST00000485402 SLC12A5Q9H2X9 1139 aa19.33■□□□□ 0.69
TTC3-219ENST00000485402 EVC2Q86UK5 1308 aa19.33■□□□□ 0.68
TTC3-219ENST00000485402 GSE1Q14687 1217 aa19.33■□□□□ 0.68
TTC3-219ENST00000485402 ASXL1Q8IXJ9 1541 aa19.32■□□□□ 0.68
TTC3-219ENST00000485402 METP08581 1390 aa19.32■□□□□ 0.68
TTC3-219ENST00000485402 RIMS1Q86UR5 1692 aaKnown RBP19.32■□□□□ 0.68
TTC3-219ENST00000485402 UBR1Q8IWV7 1749 aa19.3■□□□□ 0.68
TTC3-219ENST00000485402 FRAT1Q92837 279 aaPredicted RBP19.3■□□□□ 0.68
TTC3-219ENST00000485402 ADAMTS8Q9UP79 889 aa19.3■□□□□ 0.68
TTC3-219ENST00000485402 SBNO2Q9Y2G9 1366 aa19.29■□□□□ 0.68
TTC3-219ENST00000485402 PTPRMP28827 1452 aa19.29■□□□□ 0.68
TTC3-219ENST00000485402 QRICH2Q9H0J4 1663 aa19.28■□□□□ 0.68
TTC3-219ENST00000485402 WDR43Q15061 677 aaKnown RBP eCLIP19.27■□□□□ 0.68
TTC3-219ENST00000485402 PLEKHH1Q9ULM0 1364 aa19.27■□□□□ 0.67
TTC3-219ENST00000485402 KDM5AP29375 1690 aaKnown RBP19.26■□□□□ 0.67
TTC3-219ENST00000485402 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
TTC3-219ENST00000485402 CARD14Q9BXL6 1004 aa19.25■□□□□ 0.67
TTC3-219ENST00000485402 FRAT2O75474 233 aaPredicted RBP19.25■□□□□ 0.67
TTC3-219ENST00000485402 ARXQ96QS3 562 aa19.25■□□□□ 0.67
TTC3-219ENST00000485402 CDK19Q9BWU1 502 aa19.25■□□□□ 0.67
TTC3-219ENST00000485402 MYO3AQ8NEV4 1616 aa19.24■□□□□ 0.67
TTC3-219ENST00000485402 CCDC146Q8IYE0 955 aa19.24■□□□□ 0.67
TTC3-219ENST00000485402 AMER1Q5JTC6 1135 aaPredicted RBP19.23■□□□□ 0.67
TTC3-219ENST00000485402 ABCC11Q96J66 1382 aa19.22■□□□□ 0.67
TTC3-219ENST00000485402 PLEKHG1Q9ULL1 1385 aa19.22■□□□□ 0.67
TTC3-219ENST00000485402 NRXN3Q9Y4C0 1643 aa19.2■□□□□ 0.66
TTC3-219ENST00000485402 NUTM2FA1L443 756 aa19.2■□□□□ 0.66
TTC3-219ENST00000485402 TNNT2P45379 298 aaPredicted RBP19.2■□□□□ 0.66
TTC3-219ENST00000485402 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
TTC3-219ENST00000485402 ADAMTS13Q76LX8 1427 aa19.2■□□□□ 0.66
TTC3-219ENST00000485402 ANKLE2Q86XL3 938 aa19.2■□□□□ 0.66
TTC3-219ENST00000485402 PARD3Q8TEW0 1356 aa19.2■□□□□ 0.66
TTC3-219ENST00000485402 TULP4Q9NRJ4 1543 aa19.2■□□□□ 0.66
TTC3-219ENST00000485402 ADAMTSL3P82987 1691 aa19.19■□□□□ 0.66
TTC3-219ENST00000485402 AMOTL2Q9Y2J4 779 aa19.19■□□□□ 0.66
TTC3-219ENST00000485402 CENPQQ7L2Z9 268 aaPredicted RBP19.18■□□□□ 0.66
TTC3-219ENST00000485402 CABP1Q9NZU7 370 aa19.17■□□□□ 0.66
TTC3-219ENST00000485402 MYOM1P52179 1685 aa19.17■□□□□ 0.66
TTC3-219ENST00000485402 CEP170BQ9Y4F5 1589 aaPredicted RBP19.17■□□□□ 0.66
TTC3-219ENST00000485402 NSD3Q9BZ95 1437 aa19.16■□□□□ 0.66
TTC3-219ENST00000485402 GOLGA2Q08379 1002 aa19.16■□□□□ 0.66
TTC3-219ENST00000485402 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.16■□□□□ 0.66
TTC3-219ENST00000485402 TBX22Q9Y458 520 aa19.16■□□□□ 0.66
TTC3-219ENST00000485402 ROBO2Q9HCK4 1378 aa19.15■□□□□ 0.66
TTC3-219ENST00000485402 SETD1BQ9UPS6 1966 aaKnown RBP19.15■□□□□ 0.66
TTC3-219ENST00000485402 ARHGAP23Q9P227 1491 aa19.15■□□□□ 0.66
TTC3-219ENST00000485402 SLKQ9H2G2 1235 aaPredicted RBP19.15■□□□□ 0.66
TTC3-219ENST00000485402 SLIT1O75093 1534 aa19.15■□□□□ 0.66
TTC3-219ENST00000485402 CANXP27824 592 aaKnown RBP19.14■□□□□ 0.65
TTC3-219ENST00000485402 C8orf34Q49A92 452 aa19.14■□□□□ 0.65
TTC3-219ENST00000485402 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.65
TTC3-219ENST00000485402 WASLO00401 505 aaPredicted RBP19.14■□□□□ 0.65
TTC3-219ENST00000485402 PPP2R1AP30153 589 aa19.14■□□□□ 0.65
TTC3-219ENST00000485402 NCKAP5LQ9HCH0 1330 aa19.14■□□□□ 0.65
TTC3-219ENST00000485402 BCAR3O75815 825 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms