RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 DDX17Q92841 729 aaKnown RBP15.47■□□□□ 0.07
DDX56-212ENST00000485367 NHSL1Q5SYE7 1610 aa15.47■□□□□ 0.07
DDX56-212ENST00000485367 NRXN1Q9ULB1 1477 aa15.47■□□□□ 0.07
DDX56-212ENST00000485367 TECPR2O15040 1411 aa15.46■□□□□ 0.07
DDX56-212ENST00000485367 YTHDC2Q9H6S0 1430 aaKnown RBP15.46■□□□□ 0.07
DDX56-212ENST00000485367 ORAI2Q96SN7 254 aa15.46■□□□□ 0.07
DDX56-212ENST00000485367 KDM2AQ9Y2K7 1162 aa15.46■□□□□ 0.07
DDX56-212ENST00000485367 SPATA31A6Q5VVP1 1343 aa15.46■□□□□ 0.06
DDX56-212ENST00000485367 KNDC1Q76NI1 1749 aa15.46■□□□□ 0.06
DDX56-212ENST00000485367 SHPRHQ149N8 1683 aa15.45■□□□□ 0.06
DDX56-212ENST00000485367 DCAF11Q8TEB1 546 aa15.45■□□□□ 0.06
DDX56-212ENST00000485367 GTF3C3Q9Y5Q9 886 aa15.45■□□□□ 0.06
DDX56-212ENST00000485367 PLEKHH1Q9ULM0 1364 aa15.45■□□□□ 0.06
DDX56-212ENST00000485367 LAMC1P11047 1609 aa15.44■□□□□ 0.06
DDX56-212ENST00000485367 DHX57Q6P158 1386 aaKnown RBP15.44■□□□□ 0.06
DDX56-212ENST00000485367 MEX3CQ5U5Q3 659 aaKnown RBP15.44■□□□□ 0.06
DDX56-212ENST00000485367 LRRC59Q96AG4 307 aaKnown RBP15.44■□□□□ 0.06
DDX56-212ENST00000485367 CDC42BPGQ6DT37 1551 aa15.43■□□□□ 0.06
DDX56-212ENST00000485367 NUTM2BA6NNL0 878 aaPredicted RBP15.43■□□□□ 0.06
DDX56-212ENST00000485367 NUTM2EB1AL46 878 aaPredicted RBP15.43■□□□□ 0.06
DDX56-212ENST00000485367 NUTM2AQ8IVF1 878 aaPredicted RBP15.43■□□□□ 0.06
DDX56-212ENST00000485367 LRP6O75581 1613 aa15.43■□□□□ 0.06
DDX56-212ENST00000485367 NUTM2FA1L443 756 aa15.41■□□□□ 0.06
DDX56-212ENST00000485367 ESCO1Q5FWF5 840 aa15.41■□□□□ 0.06
DDX56-212ENST00000485367 POTEAQ6S8J7 498 aa15.41■□□□□ 0.06
DDX56-212ENST00000485367 SIRT1Q96EB6 747 aa15.41■□□□□ 0.06
DDX56-212ENST00000485367 SAFB2Q14151 953 aaKnown RBP eCLIP15.39■□□□□ 0.05
DDX56-212ENST00000485367 PRAM1Q96QH2 718 aa15.39■□□□□ 0.05
DDX56-212ENST00000485367 PNPLA6Q8IY17 1366 aa15.38■□□□□ 0.05
DDX56-212ENST00000485367 STAC3Q96MF2 364 aa15.38■□□□□ 0.05
DDX56-212ENST00000485367 POGKQ9P215 609 aa15.38■□□□□ 0.05
DDX56-212ENST00000485367 SOS2Q07890 1332 aaPredicted RBP15.37■□□□□ 0.05
DDX56-212ENST00000485367 FMN2Q9NZ56 1722 aa15.37■□□□□ 0.05
DDX56-212ENST00000485367 TRAK1Q9UPV9 953 aa15.36■□□□□ 0.05
DDX56-212ENST00000485367 ADGRB1O14514 1584 aa15.36■□□□□ 0.05
DDX56-212ENST00000485367 FOXO3O43524 673 aa15.36■□□□□ 0.05
DDX56-212ENST00000485367 NPHP3Q7Z494 1330 aa15.35■□□□□ 0.05
DDX56-212ENST00000485367 XPCQ01831 940 aaPredicted RBP15.35■□□□□ 0.05
DDX56-212ENST00000485367 DLC1Q96QB1 1528 aa15.35■□□□□ 0.05
DDX56-212ENST00000485367 ZNF772Q68DY9 489 aaPredicted RBP15.34■□□□□ 0.05
DDX56-212ENST00000485367 RGPD8O14715 1765 aaPredicted RBP15.33■□□□□ 0.04
DDX56-212ENST00000485367 ADAMTS2O95450 1211 aa15.32■□□□□ 0.04
DDX56-212ENST00000485367 C8orf37Q96NL8 207 aa15.32■□□□□ 0.04
DDX56-212ENST00000485367 PXDNQ92626 1479 aa15.32■□□□□ 0.04
DDX56-212ENST00000485367 HIRIP3Q9BW71 556 aaPredicted RBP15.31■□□□□ 0.04
DDX56-212ENST00000485367 AFF2P51816 1311 aa15.31■□□□□ 0.04
DDX56-212ENST00000485367 MINK1Q8N4C8 1332 aaPredicted RBP15.31■□□□□ 0.04
DDX56-212ENST00000485367 KIF1AQ12756 1690 aa15.3■□□□□ 0.04
DDX56-212ENST00000485367 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
DDX56-212ENST00000485367 PHF8Q9UPP1 1060 aa15.29■□□□□ 0.04
DDX56-212ENST00000485367 KRT28Q7Z3Y7 464 aa15.29■□□□□ 0.04
DDX56-212ENST00000485367 NGLY1Q96IV0 654 aa15.29■□□□□ 0.04
DDX56-212ENST00000485367 COL22A1Q8NFW1 1626 aaPredicted RBP15.27■□□□□ 0.04
DDX56-212ENST00000485367 SIN3AQ96ST3 1273 aa15.27■□□□□ 0.04
DDX56-212ENST00000485367 ADGRB2O60241 1585 aa15.27■□□□□ 0.04
DDX56-212ENST00000485367 RXRBP28702 533 aa15.26■□□□□ 0.03
DDX56-212ENST00000485367 ARHGEF28Q8N1W1 1705 aaKnown RBP15.26■□□□□ 0.03
DDX56-212ENST00000485367 KIAA1210Q9ULL0 1709 aa15.26■□□□□ 0.03
DDX56-212ENST00000485367 ANKARQ7Z5J8 1434 aa15.26■□□□□ 0.03
DDX56-212ENST00000485367 PMFBP1Q8TBY8 1022 aa15.26■□□□□ 0.03
DDX56-212ENST00000485367 USP32Q8NFA0 1604 aa15.26■□□□□ 0.03
DDX56-212ENST00000485367 PSME1Q06323 249 aa15.25■□□□□ 0.03
DDX56-212ENST00000485367 NBPF1Q3BBV0 1214 aa15.25■□□□□ 0.03
DDX56-212ENST00000485367 L3MBTL2Q969R5 705 aa15.25■□□□□ 0.03
DDX56-212ENST00000485367 SPATA31A3Q5VYP0 1347 aa15.25■□□□□ 0.03
DDX56-212ENST00000485367 WASLO00401 505 aaPredicted RBP15.24■□□□□ 0.03
DDX56-212ENST00000485367 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
DDX56-212ENST00000485367 EIF3AQ14152 1382 aaKnown RBP15.24■□□□□ 0.03
DDX56-212ENST00000485367 PRR36Q9H6K5 1346 aa15.23■□□□□ 0.03
DDX56-212ENST00000485367 PLEKHG5O94827 1062 aa15.22■□□□□ 0.03
DDX56-212ENST00000485367 LMOD2Q6P5Q4 547 aa15.22■□□□□ 0.03
DDX56-212ENST00000485367 TULP4Q9NRJ4 1543 aa15.22■□□□□ 0.03
DDX56-212ENST00000485367 USP21Q9UK80 565 aa15.21■□□□□ 0.03
DDX56-212ENST00000485367 TNS3Q68CZ2 1445 aa15.21■□□□□ 0.02
DDX56-212ENST00000485367 MARF1Q9Y4F3 1742 aaKnown RBP15.21■□□□□ 0.02
DDX56-212ENST00000485367 SBNO1A3KN83 1393 aa15.2■□□□□ 0.02
DDX56-212ENST00000485367 CLSPNQ9HAW4 1339 aa15.2■□□□□ 0.02
DDX56-212ENST00000485367 RBM6P78332 1123 aaKnown RBP15.2■□□□□ 0.02
DDX56-212ENST00000485367 FNBP4Q8N3X1 1017 aaPredicted RBP15.2■□□□□ 0.02
DDX56-212ENST00000485367 HAP1P54257 671 aaPredicted RBP15.19■□□□□ 0.02
DDX56-212ENST00000485367 NUDT16Q96DE0 195 aaKnown RBP15.19■□□□□ 0.02
DDX56-212ENST00000485367 CDK19Q9BWU1 502 aa15.19■□□□□ 0.02
DDX56-212ENST00000485367 GPRASP1Q5JY77 1395 aa15.19■□□□□ 0.02
DDX56-212ENST00000485367 NGDNQ8NEJ9 315 aaKnown RBP15.19■□□□□ 0.02
DDX56-212ENST00000485367 CABLES1Q8TDN4 633 aa15.19■□□□□ 0.02
DDX56-212ENST00000485367 TRPC5Q9UL62 973 aaPredicted RBP15.18■□□□□ 0.02
DDX56-212ENST00000485367 CDK12Q9NYV4 1490 aaPredicted RBP15.18■□□□□ 0.02
DDX56-212ENST00000485367 ARHGEF10O15013 1369 aa15.17■□□□□ 0.02
DDX56-212ENST00000485367 ITSN1Q15811 1721 aa15.17■□□□□ 0.02
DDX56-212ENST00000485367 CENPJQ9HC77 1338 aaPredicted RBP15.16■□□□□ 0.02
DDX56-212ENST00000485367 ATP7BP35670 1465 aa15.16■□□□□ 0.02
DDX56-212ENST00000485367 TRPM3Q9HCF6 1732 aaPredicted RBP15.15■□□□□ 0.02
DDX56-212ENST00000485367 PAK3O75914 559 aaPredicted RBP15.15■□□□□ 0.02
DDX56-212ENST00000485367 BCL9LQ86UU0 1499 aa15.14■□□□□ 0.01
DDX56-212ENST00000485367 TRPM1Q7Z4N2 1603 aa15.14■□□□□ 0.01
DDX56-212ENST00000485367 RGS12O14924 1447 aa15.14■□□□□ 0.01
DDX56-212ENST00000485367 ATRNO75882 1429 aa15.14■□□□□ 0.01
DDX56-212ENST00000485367 QRICH2Q9H0J4 1663 aa15.13■□□□□ 0.01
DDX56-212ENST00000485367 SRPK2P78362 688 aaKnown RBP15.13■□□□□ 0.01
DDX56-212ENST00000485367 ABCA3Q99758 1704 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms