RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 TERF2IPQ9NYB0 399 aa24.94■■□□□ 1.58
NECTIN3-206ENST00000485303 LRPPRCP42704 1394 aaKnown RBP24.94■■□□□ 1.58
NECTIN3-206ENST00000485303 NSD3Q9BZ95 1437 aa24.93■■□□□ 1.58
NECTIN3-206ENST00000485303 C3P01024 1663 aa24.92■■□□□ 1.58
NECTIN3-206ENST00000485303 AMER1Q5JTC6 1135 aaPredicted RBP24.92■■□□□ 1.58
NECTIN3-206ENST00000485303 NCKAP5LQ9HCH0 1330 aa24.91■■□□□ 1.58
NECTIN3-206ENST00000485303 GGNBP2Q9H3C7 697 aa24.91■■□□□ 1.58
NECTIN3-206ENST00000485303 SBNO2Q9Y2G9 1366 aa24.9■■□□□ 1.58
NECTIN3-206ENST00000485303 PPM1GO15355 546 aaPredicted RBP24.9■■□□□ 1.58
NECTIN3-206ENST00000485303 PPP2R1AP30153 589 aa24.89■■□□□ 1.58
NECTIN3-206ENST00000485303 ASXL1Q8IXJ9 1541 aa24.89■■□□□ 1.58
NECTIN3-206ENST00000485303 CGNL1Q0VF96 1302 aa24.89■■□□□ 1.57
NECTIN3-206ENST00000485303 KDM5AP29375 1690 aaKnown RBP24.89■■□□□ 1.57
NECTIN3-206ENST00000485303 PLEKHG5O94827 1062 aa24.88■■□□□ 1.57
NECTIN3-206ENST00000485303 QRICH2Q9H0J4 1663 aa24.87■■□□□ 1.57
NECTIN3-206ENST00000485303 WASLO00401 505 aaPredicted RBP24.87■■□□□ 1.57
NECTIN3-206ENST00000485303 HSPA2P54652 639 aa24.87■■□□□ 1.57
NECTIN3-206ENST00000485303 PNISRQ8TF01 805 aaKnown RBP24.87■■□□□ 1.57
NECTIN3-206ENST00000485303 ABCC11Q96J66 1382 aa24.86■■□□□ 1.57
NECTIN3-206ENST00000485303 PTPRMP28827 1452 aa24.86■■□□□ 1.57
NECTIN3-206ENST00000485303 PLEKHG1Q9ULL1 1385 aa24.86■■□□□ 1.57
NECTIN3-206ENST00000485303 ATAD2Q6PL18 1390 aa24.85■■□□□ 1.57
NECTIN3-206ENST00000485303 BRD4O60885 1362 aaPredicted RBP24.85■■□□□ 1.57
NECTIN3-206ENST00000485303 SOX12O15370 315 aa24.85■■□□□ 1.57
NECTIN3-206ENST00000485303 NUDT16Q96DE0 195 aaKnown RBP24.85■■□□□ 1.57
NECTIN3-206ENST00000485303 PARD3Q8TEW0 1356 aa24.85■■□□□ 1.57
NECTIN3-206ENST00000485303 KCNA6P17658 529 aa24.84■■□□□ 1.57
NECTIN3-206ENST00000485303 NEFLP07196 543 aa24.83■■□□□ 1.57
NECTIN3-206ENST00000485303 TBX22Q9Y458 520 aa24.83■■□□□ 1.57
NECTIN3-206ENST00000485303 ROBO2Q9HCK4 1378 aa24.82■■□□□ 1.56
NECTIN3-206ENST00000485303 PMFBP1Q8TBY8 1022 aa24.82■■□□□ 1.56
NECTIN3-206ENST00000485303 UBR1Q8IWV7 1749 aa24.81■■□□□ 1.56
NECTIN3-206ENST00000485303 ADAMTS13Q76LX8 1427 aa24.79■■□□□ 1.56
NECTIN3-206ENST00000485303 TULP4Q9NRJ4 1543 aa24.79■■□□□ 1.56
NECTIN3-206ENST00000485303 CCDC146Q8IYE0 955 aa24.78■■□□□ 1.56
NECTIN3-206ENST00000485303 A0A1W2PP64 1363 aa24.78■■□□□ 1.56
NECTIN3-206ENST00000485303 CCDC61Q9Y6R9 512 aa24.78■■□□□ 1.56
NECTIN3-206ENST00000485303 NGDNQ8NEJ9 315 aaKnown RBP24.77■■□□□ 1.56
NECTIN3-206ENST00000485303 ARHGEF28Q8N1W1 1705 aaKnown RBP24.77■■□□□ 1.56
NECTIN3-206ENST00000485303 ANKRD36BQ8N2N9 1353 aa24.76■■□□□ 1.55
NECTIN3-206ENST00000485303 ADAMTS8Q9UP79 889 aa24.75■■□□□ 1.55
NECTIN3-206ENST00000485303 MTHFSP49914 203 aa24.74■■□□□ 1.55
NECTIN3-206ENST00000485303 CFAP53Q96M91 514 aa24.74■■□□□ 1.55
NECTIN3-206ENST00000485303 CEP170BQ9Y4F5 1589 aaPredicted RBP24.74■■□□□ 1.55
NECTIN3-206ENST00000485303 IRX6P78412 446 aaPredicted RBP24.73■■□□□ 1.55
NECTIN3-206ENST00000485303 U2SURPO15042 1029 aaKnown RBP24.73■■□□□ 1.55
NECTIN3-206ENST00000485303 FBLN1P23142 703 aa24.73■■□□□ 1.55
NECTIN3-206ENST00000485303 NEUROD2Q15784 382 aa24.73■■□□□ 1.55
NECTIN3-206ENST00000485303 PAK3O75914 559 aaPredicted RBP24.71■■□□□ 1.55
NECTIN3-206ENST00000485303 MYO3AQ8NEV4 1616 aa24.71■■□□□ 1.55
NECTIN3-206ENST00000485303 PPIP5K1Q6PFW1 1433 aa24.71■■□□□ 1.55
NECTIN3-206ENST00000485303 PUS7Q96PZ0 661 aaKnown RBP24.71■■□□□ 1.55
NECTIN3-206ENST00000485303 SUPT16HQ9Y5B9 1047 aaKnown RBP24.7■■□□□ 1.54
NECTIN3-206ENST00000485303 FKBP8Q14318 412 aa24.7■■□□□ 1.54
NECTIN3-206ENST00000485303 PROSER2Q86WR7 435 aaPredicted RBP24.69■■□□□ 1.54
NECTIN3-206ENST00000485303 NME9Q86XW9 330 aa24.69■■□□□ 1.54
NECTIN3-206ENST00000485303 PTPRUQ92729 1446 aa24.68■■□□□ 1.54
NECTIN3-206ENST00000485303 FYB1O15117 783 aa24.68■■□□□ 1.54
NECTIN3-206ENST00000485303 ZBED9Q6R2W3 1325 aa24.67■■□□□ 1.54
NECTIN3-206ENST00000485303 LMOD2Q6P5Q4 547 aa24.67■■□□□ 1.54
NECTIN3-206ENST00000485303 ZRANB1Q9UGI0 708 aa24.67■■□□□ 1.54
NECTIN3-206ENST00000485303 SETD1BQ9UPS6 1966 aaKnown RBP24.66■■□□□ 1.54
NECTIN3-206ENST00000485303 U2AF1L5P0DN76 240 aaPredicted RBP24.66■■□□□ 1.54
NECTIN3-206ENST00000485303 U2AF1Q01081 240 aaKnown RBP eCLIP24.66■■□□□ 1.54
NECTIN3-206ENST00000485303 NUTM2GQ5VZR2 741 aa24.66■■□□□ 1.54
NECTIN3-206ENST00000485303 PRR36Q9H6K5 1346 aa24.65■■□□□ 1.54
NECTIN3-206ENST00000485303 NRXN3Q9Y4C0 1643 aa24.65■■□□□ 1.54
NECTIN3-206ENST00000485303 ZBTB7CA1YPR0 619 aa24.64■■□□□ 1.54
NECTIN3-206ENST00000485303 ARHGAP23Q9P227 1491 aa24.64■■□□□ 1.54
NECTIN3-206ENST00000485303 PELP1Q8IZL8 1130 aaKnown RBP24.64■■□□□ 1.53
NECTIN3-206ENST00000485303 COG3Q96JB2 828 aa24.64■■□□□ 1.53
NECTIN3-206ENST00000485303 ACEP12821 1306 aa24.64■■□□□ 1.53
NECTIN3-206ENST00000485303 NINLQ9Y2I6 1382 aa24.64■■□□□ 1.53
NECTIN3-206ENST00000485303 SLIT1O75093 1534 aa24.64■■□□□ 1.53
NECTIN3-206ENST00000485303 SIRT1Q96EB6 747 aa24.63■■□□□ 1.53
NECTIN3-206ENST00000485303 MYOM1P52179 1685 aa24.63■■□□□ 1.53
NECTIN3-206ENST00000485303 FAM135BQ49AJ0 1406 aa24.63■■□□□ 1.53
NECTIN3-206ENST00000485303 ADAMTSL3P82987 1691 aa24.63■■□□□ 1.53
NECTIN3-206ENST00000485303 ESCO1Q5FWF5 840 aa24.61■■□□□ 1.53
NECTIN3-206ENST00000485303 NPHP4O75161 1426 aaPredicted RBP24.61■■□□□ 1.53
NECTIN3-206ENST00000485303 RRP7AQ9Y3A4 280 aaKnown RBP24.6■■□□□ 1.53
NECTIN3-206ENST00000485303 DLC1Q96QB1 1528 aa24.6■■□□□ 1.53
NECTIN3-206ENST00000485303 APAF1O14727 1248 aa24.59■■□□□ 1.53
NECTIN3-206ENST00000485303 NPC1L1Q9UHC9 1359 aa24.59■■□□□ 1.53
NECTIN3-206ENST00000485303 KDM4FA0A1W2PPD8 638 aa24.58■■□□□ 1.53
NECTIN3-206ENST00000485303 NUDCQ9Y266 331 aa24.58■■□□□ 1.53
NECTIN3-206ENST00000485303 XPCQ01831 940 aaPredicted RBP24.57■■□□□ 1.52
NECTIN3-206ENST00000485303 RRS1Q15050 365 aaKnown RBP24.57■■□□□ 1.52
NECTIN3-206ENST00000485303 ZNF692Q9BU19 519 aaPredicted RBP24.57■■□□□ 1.52
NECTIN3-206ENST00000485303 TECPR2O15040 1411 aa24.55■■□□□ 1.52
NECTIN3-206ENST00000485303 CDCA7LQ96GN5 454 aa24.54■■□□□ 1.52
NECTIN3-206ENST00000485303 EMILIN1Q9Y6C2 1016 aa24.53■■□□□ 1.52
NECTIN3-206ENST00000485303 PSME1Q06323 249 aa24.52■■□□□ 1.52
NECTIN3-206ENST00000485303 NEFMP07197 916 aa24.51■■□□□ 1.51
NECTIN3-206ENST00000485303 NLRP6P59044 892 aa24.51■■□□□ 1.51
NECTIN3-206ENST00000485303 NSD2O96028 1365 aa24.51■■□□□ 1.51
NECTIN3-206ENST00000485303 SETD1AO15047 1707 aaKnown RBP24.5■■□□□ 1.51
NECTIN3-206ENST00000485303 TTC21BQ7Z4L5 1316 aa24.49■■□□□ 1.51
NECTIN3-206ENST00000485303 MED14O60244 1454 aa24.49■■□□□ 1.51
NECTIN3-206ENST00000485303 DIAPH1O60610 1272 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms