RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 USP21Q9UK80 565 aa20.77■□□□□ 0.92
NUP188-206ENST00000485158 TRPC5Q9UL62 973 aaPredicted RBP20.77■□□□□ 0.92
NUP188-206ENST00000485158 MYOM2P54296 1465 aa20.76■□□□□ 0.91
NUP188-206ENST00000485158 ATAD2Q6PL18 1390 aa20.75■□□□□ 0.91
NUP188-206ENST00000485158 ATRNO75882 1429 aa20.75■□□□□ 0.91
NUP188-206ENST00000485158 EP400Q96L91 3159 aa20.74■□□□□ 0.91
NUP188-206ENST00000485158 PXDNQ92626 1479 aa20.74■□□□□ 0.91
NUP188-206ENST00000485158 NPHP3Q7Z494 1330 aa20.74■□□□□ 0.91
NUP188-206ENST00000485158 TECPR2O15040 1411 aa20.73■□□□□ 0.91
NUP188-206ENST00000485158 SLC4A1APQ9BWU0 796 aaKnown RBP20.72■□□□□ 0.91
NUP188-206ENST00000485158 BCL9LQ86UU0 1499 aa20.71■□□□□ 0.91
NUP188-206ENST00000485158 ESCO1Q5FWF5 840 aa20.68■□□□□ 0.9
NUP188-206ENST00000485158 SPATA31E1Q6ZUB1 1445 aa20.68■□□□□ 0.9
NUP188-206ENST00000485158 LRPPRCP42704 1394 aaKnown RBP20.67■□□□□ 0.9
NUP188-206ENST00000485158 ABCC11Q96J66 1382 aa20.67■□□□□ 0.9
NUP188-206ENST00000485158 MARF1Q9Y4F3 1742 aaKnown RBP20.67■□□□□ 0.9
NUP188-206ENST00000485158 FOXO3O43524 673 aa20.66■□□□□ 0.9
NUP188-206ENST00000485158 CCDC125Q86Z20 511 aa20.66■□□□□ 0.9
NUP188-206ENST00000485158 ADGRF5Q8IZF2 1346 aa20.66■□□□□ 0.9
NUP188-206ENST00000485158 ANKRD30BQ9BXX2 1392 aa20.66■□□□□ 0.9
NUP188-206ENST00000485158 CCDC144AA2RUR9 1427 aa20.63■□□□□ 0.89
NUP188-206ENST00000485158 GJD4Q96KN9 370 aaPredicted RBP20.63■□□□□ 0.89
NUP188-206ENST00000485158 KNDC1Q76NI1 1749 aa20.63■□□□□ 0.89
NUP188-206ENST00000485158 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.63■□□□□ 0.89
NUP188-206ENST00000485158 IFT172Q9UG01 1749 aa20.63■□□□□ 0.89
NUP188-206ENST00000485158 FOXD1Q16676 465 aa20.62■□□□□ 0.89
NUP188-206ENST00000485158 PIK3C2GO75747 1445 aa20.61■□□□□ 0.89
NUP188-206ENST00000485158 WAPLQ7Z5K2 1190 aa20.61■□□□□ 0.89
NUP188-206ENST00000485158 SIRT1Q96EB6 747 aa20.61■□□□□ 0.89
NUP188-206ENST00000485158 SLIT2O94813 1529 aa20.61■□□□□ 0.89
NUP188-206ENST00000485158 SPATA31A3Q5VYP0 1347 aa20.59■□□□□ 0.89
NUP188-206ENST00000485158 FMN2Q9NZ56 1722 aa20.59■□□□□ 0.89
NUP188-206ENST00000485158 XPCQ01831 940 aaPredicted RBP20.59■□□□□ 0.89
NUP188-206ENST00000485158 PLEKHH1Q9ULM0 1364 aa20.59■□□□□ 0.89
NUP188-206ENST00000485158 KIF1AQ12756 1690 aa20.58■□□□□ 0.89
NUP188-206ENST00000485158 ZRANB1Q9UGI0 708 aa20.58■□□□□ 0.89
NUP188-206ENST00000485158 UNC5CLQ8IV45 518 aa20.57■□□□□ 0.88
NUP188-206ENST00000485158 STK26Q9P289 416 aa20.57■□□□□ 0.88
NUP188-206ENST00000485158 GLI3P10071 1580 aa20.56■□□□□ 0.88
NUP188-206ENST00000485158 YTHDC2Q9H6S0 1430 aaKnown RBP20.56■□□□□ 0.88
NUP188-206ENST00000485158 RGL3Q3MIN7 710 aa20.56■□□□□ 0.88
NUP188-206ENST00000485158 TMEM132EQ6IEE7 984 aa20.55■□□□□ 0.88
NUP188-206ENST00000485158 MPHOSPH9Q99550 1183 aa20.55■□□□□ 0.88
NUP188-206ENST00000485158 RALGAPBQ86X10 1494 aa20.55■□□□□ 0.88
NUP188-206ENST00000485158 USP32Q8NFA0 1604 aa20.54■□□□□ 0.88
NUP188-206ENST00000485158 NRXN1Q9ULB1 1477 aa20.54■□□□□ 0.88
NUP188-206ENST00000485158 NUTM2FA1L443 756 aa20.53■□□□□ 0.88
NUP188-206ENST00000485158 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
NUP188-206ENST00000485158 KRT28Q7Z3Y7 464 aa20.52■□□□□ 0.88
NUP188-206ENST00000485158 C14orf93Q9H972 538 aaKnown RBP20.52■□□□□ 0.88
NUP188-206ENST00000485158 TNS3Q68CZ2 1445 aa20.51■□□□□ 0.87
NUP188-206ENST00000485158 ONECUT3O60422 494 aaPredicted RBP20.5■□□□□ 0.87
NUP188-206ENST00000485158 SBNO1A3KN83 1393 aa20.49■□□□□ 0.87
NUP188-206ENST00000485158 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
NUP188-206ENST00000485158 VPS72Q15906 364 aa20.48■□□□□ 0.87
NUP188-206ENST00000485158 PHF8Q9UPP1 1060 aa20.48■□□□□ 0.87
NUP188-206ENST00000485158 PSME1Q06323 249 aa20.47■□□□□ 0.87
NUP188-206ENST00000485158 NWD2Q9ULI1 1742 aa20.47■□□□□ 0.87
NUP188-206ENST00000485158 DHX57Q6P158 1386 aaKnown RBP20.46■□□□□ 0.87
NUP188-206ENST00000485158 RGPD8O14715 1765 aaPredicted RBP20.45■□□□□ 0.86
NUP188-206ENST00000485158 BRWD3Q6RI45 1802 aa20.45■□□□□ 0.86
NUP188-206ENST00000485158 ARHGEF10O15013 1369 aa20.45■□□□□ 0.86
NUP188-206ENST00000485158 DLC1Q96QB1 1528 aa20.44■□□□□ 0.86
NUP188-206ENST00000485158 ANKARQ7Z5J8 1434 aa20.44■□□□□ 0.86
NUP188-206ENST00000485158 PLCH1Q4KWH8 1693 aa20.43■□□□□ 0.86
NUP188-206ENST00000485158 SEPT12Q8IYM1 358 aa20.43■□□□□ 0.86
NUP188-206ENST00000485158 ABCA3Q99758 1704 aa20.43■□□□□ 0.86
NUP188-206ENST00000485158 CFAP70Q5T0N1 1121 aa20.42■□□□□ 0.86
NUP188-206ENST00000485158 CABLES1Q8TDN4 633 aa20.42■□□□□ 0.86
NUP188-206ENST00000485158 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
NUP188-206ENST00000485158 PRAM1Q96QH2 718 aa20.4■□□□□ 0.86
NUP188-206ENST00000485158 ADGRB1O14514 1584 aa20.38■□□□□ 0.85
NUP188-206ENST00000485158 FAM83GA6ND36 823 aa20.38■□□□□ 0.85
NUP188-206ENST00000485158 HAP1P54257 671 aaPredicted RBP20.38■□□□□ 0.85
NUP188-206ENST00000485158 KRT27Q7Z3Y8 459 aa20.38■□□□□ 0.85
NUP188-206ENST00000485158 DEFB132Q7Z7B7 95 aa20.38■□□□□ 0.85
NUP188-206ENST00000485158 TRPM3Q9HCF6 1732 aaPredicted RBP20.36■□□□□ 0.85
NUP188-206ENST00000485158 SF3B2Q13435 895 aaKnown RBP20.36■□□□□ 0.85
NUP188-206ENST00000485158 NRAPQ86VF7 1730 aa20.35■□□□□ 0.85
NUP188-206ENST00000485158 ALS2Q96Q42 1657 aa20.34■□□□□ 0.85
NUP188-206ENST00000485158 LRP5O75197 1615 aa20.34■□□□□ 0.85
NUP188-206ENST00000485158 SAFB2Q14151 953 aaKnown RBP eCLIP20.33■□□□□ 0.85
NUP188-206ENST00000485158 PMFBP1Q8TBY8 1022 aa20.33■□□□□ 0.85
NUP188-206ENST00000485158 POGKQ9P215 609 aa20.33■□□□□ 0.85
NUP188-206ENST00000485158 EIF3AQ14152 1382 aaKnown RBP20.33■□□□□ 0.84
NUP188-206ENST00000485158 LMOD2Q6P5Q4 547 aa20.32■□□□□ 0.84
NUP188-206ENST00000485158 CCDC9Q9Y3X0 531 aaKnown RBP20.31■□□□□ 0.84
NUP188-206ENST00000485158 TULP4Q9NRJ4 1543 aa20.31■□□□□ 0.84
NUP188-206ENST00000485158 COL14A1Q05707 1796 aaKnown RBP20.31■□□□□ 0.84
NUP188-206ENST00000485158 PRR36Q9H6K5 1346 aa20.3■□□□□ 0.84
NUP188-206ENST00000485158 BTG4Q9NY30 223 aa20.3■□□□□ 0.84
NUP188-206ENST00000485158 GPRASP1Q5JY77 1395 aa20.3■□□□□ 0.84
NUP188-206ENST00000485158 CRYBG1Q9Y4K1 1723 aa20.28■□□□□ 0.84
NUP188-206ENST00000485158 STAC3Q96MF2 364 aa20.28■□□□□ 0.84
NUP188-206ENST00000485158 SPATA31A5Q5VU36 1347 aa20.27■□□□□ 0.84
NUP188-206ENST00000485158 SPATA31A7Q8IWB4 1347 aa20.27■□□□□ 0.84
NUP188-206ENST00000485158 WASLO00401 505 aaPredicted RBP20.27■□□□□ 0.84
NUP188-206ENST00000485158 BAG6P46379 1132 aa20.27■□□□□ 0.84
NUP188-206ENST00000485158 FAM98CQ17RN3 349 aaKnown RBP20.27■□□□□ 0.84
NUP188-206ENST00000485158 TRAK1Q9UPV9 953 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms