RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 PRPF38BQ5VTL8 546 aaKnown RBP8.07□□□□□ -1.12
TM9SF3-205ENST00000485093 GFRA3O60609 400 aa8.06□□□□□ -1.12
TM9SF3-205ENST00000485093 RNF40O75150 1001 aa8.06□□□□□ -1.12
TM9SF3-205ENST00000485093 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
TM9SF3-205ENST00000485093 PUS10Q3MIT2 529 aaKnown RBP8.06□□□□□ -1.12
TM9SF3-205ENST00000485093 BLOC1S3Q6QNY0 202 aa8.06□□□□□ -1.12
TM9SF3-205ENST00000485093 FDX1P10109 184 aa8.05□□□□□ -1.12
TM9SF3-205ENST00000485093 GUCA2AQ02747 115 aa8.05□□□□□ -1.12
TM9SF3-205ENST00000485093 GRIPAP1Q4V328 841 aa8.05□□□□□ -1.12
TM9SF3-205ENST00000485093 MTRQ99707 1265 aa8.05□□□□□ -1.12
TM9SF3-205ENST00000485093 POLR3EQ9NVU0 708 aa8.05□□□□□ -1.12
TM9SF3-205ENST00000485093 PCDHB3Q9Y5E6 796 aa8.05□□□□□ -1.12
TM9SF3-205ENST00000485093 ZPR1O75312 459 aa8.04□□□□□ -1.12
TM9SF3-205ENST00000485093 ZNF787Q6DD87 383 aa8.04□□□□□ -1.12
TM9SF3-205ENST00000485093 HRCP23327 699 aa8.03□□□□□ -1.12
TM9SF3-205ENST00000485093 QPCTQ16769 361 aa8.03□□□□□ -1.12
TM9SF3-205ENST00000485093 ZNF516Q92618 1163 aa8.03□□□□□ -1.12
TM9SF3-205ENST00000485093 LOC100996750A0A140TA64 210 aa8.02□□□□□ -1.13
TM9SF3-205ENST00000485093 FAM160A2Q8N612 972 aaPredicted RBP8.02□□□□□ -1.13
TM9SF3-205ENST00000485093 KRTAP4-6Q9BYQ5 205 aa8.02□□□□□ -1.13
TM9SF3-205ENST00000485093 IL21Q9HBE4 155 aa8.02□□□□□ -1.13
TM9SF3-205ENST00000485093 NRG2O14511 850 aaPredicted RBP8.01□□□□□ -1.13
TM9SF3-205ENST00000485093 NR1I2O75469 434 aa8.01□□□□□ -1.13
TM9SF3-205ENST00000485093 RTL5Q5HYW3 569 aaPredicted RBP8.01□□□□□ -1.13
TM9SF3-205ENST00000485093 RNF19BQ6ZMZ0 732 aa8.01□□□□□ -1.13
TM9SF3-205ENST00000485093 SPDYE5A6NIY4 337 aa8□□□□□ -1.13
TM9SF3-205ENST00000485093 DESI1Q6ICB0 168 aa8□□□□□ -1.13
TM9SF3-205ENST00000485093 SYMPKQ92797 1274 aaKnown RBP8□□□□□ -1.13
TM9SF3-205ENST00000485093 Q3C1V9 767 aa7.99□□□□□ -1.13
TM9SF3-205ENST00000485093 PCMTD1Q96MG8 357 aaPredicted RBP7.99□□□□□ -1.13
TM9SF3-205ENST00000485093 MMP16P51512 607 aa7.98□□□□□ -1.13
TM9SF3-205ENST00000485093 MTMR2Q13614 643 aa7.98□□□□□ -1.13
TM9SF3-205ENST00000485093 MSS51Q4VC12 460 aa7.98□□□□□ -1.13
TM9SF3-205ENST00000485093 RETREG3Q86VR2 466 aa7.98□□□□□ -1.13
TM9SF3-205ENST00000485093 CABLES1Q8TDN4 633 aa7.98□□□□□ -1.13
TM9SF3-205ENST00000485093 ZBTB3Q9H5J0 574 aa7.98□□□□□ -1.13
TM9SF3-205ENST00000485093 CFAP99D6REC4 459 aa7.97□□□□□ -1.13
TM9SF3-205ENST00000485093 FMNL1O95466 1100 aaPredicted RBP7.97□□□□□ -1.13
TM9SF3-205ENST00000485093 COPS2P61201 443 aa7.97□□□□□ -1.13
TM9SF3-205ENST00000485093 NKX2-3Q8TAU0 364 aa7.97□□□□□ -1.13
TM9SF3-205ENST00000485093 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
TM9SF3-205ENST00000485093 RFC5P40937 340 aa7.96□□□□□ -1.14
TM9SF3-205ENST00000485093 KCNC4Q03721 635 aa7.96□□□□□ -1.14
TM9SF3-205ENST00000485093 SPSB2Q99619 263 aa7.96□□□□□ -1.14
TM9SF3-205ENST00000485093 SOCS7O14512 581 aa7.95□□□□□ -1.14
TM9SF3-205ENST00000485093 ADH1BP00325 375 aa7.95□□□□□ -1.14
TM9SF3-205ENST00000485093 DXOO77932 396 aaKnown RBP7.94□□□□□ -1.14
TM9SF3-205ENST00000485093 BANK1Q8NDB2 785 aa7.94□□□□□ -1.14
TM9SF3-205ENST00000485093 TLL1O43897 1013 aa7.93□□□□□ -1.14
TM9SF3-205ENST00000485093 TMEM259Q4ZIN3 620 aa7.93□□□□□ -1.14
TM9SF3-205ENST00000485093 PRR7Q8TB68 274 aa7.93□□□□□ -1.14
TM9SF3-205ENST00000485093 LYPD8Q6UX82 237 aa7.92□□□□□ -1.14
TM9SF3-205ENST00000485093 C6orf229H3BNL8 230 aa7.91□□□□□ -1.14
TM9SF3-205ENST00000485093 CTDSPL2Q05D32 466 aa7.91□□□□□ -1.14
TM9SF3-205ENST00000485093 JUNDP17535 347 aa7.9□□□□□ -1.14
TM9SF3-205ENST00000485093 CSPP1Q1MSJ5 1256 aa7.9□□□□□ -1.14
TM9SF3-205ENST00000485093 GTF3C3Q9Y5Q9 886 aa7.9□□□□□ -1.14
TM9SF3-205ENST00000485093 PER1O15534 1290 aaPredicted RBP7.89□□□□□ -1.15
TM9SF3-205ENST00000485093 F12P00748 615 aaPredicted RBP7.89□□□□□ -1.15
TM9SF3-205ENST00000485093 NUTM2BA6NNL0 878 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-205ENST00000485093 NUTM2EB1AL46 878 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-205ENST00000485093 LCE2AQ5TA79 106 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-205ENST00000485093 NUTM2DQ5VT03 806 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-205ENST00000485093 NUTM2AQ8IVF1 878 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-205ENST00000485093 EMID1Q96A84 441 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-205ENST00000485093 GJD4Q96KN9 370 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-205ENST00000485093 SLC6A16Q9GZN6 736 aa7.88□□□□□ -1.15
TM9SF3-205ENST00000485093 PRDM9Q9NQV7 894 aa7.88□□□□□ -1.15
TM9SF3-205ENST00000485093 EVA1BQ9NVM1 165 aa7.88□□□□□ -1.15
TM9SF3-205ENST00000485093 PTPRNQ16849 979 aa7.87□□□□□ -1.15
TM9SF3-205ENST00000485093 PPP1R18Q6NYC8 613 aa7.87□□□□□ -1.15
TM9SF3-205ENST00000485093 RNF223E7ERA6 249 aa7.86□□□□□ -1.15
TM9SF3-205ENST00000485093 GPR37L1O60883 481 aa7.86□□□□□ -1.15
TM9SF3-205ENST00000485093 S1PR4O95977 384 aa7.86□□□□□ -1.15
TM9SF3-205ENST00000485093 MTMR14Q8NCE2 650 aa7.86□□□□□ -1.15
TM9SF3-205ENST00000485093 SNRKQ9NRH2 765 aa7.86□□□□□ -1.15
TM9SF3-205ENST00000485093 ANKLE1Q8NAG6 615 aa7.85□□□□□ -1.15
TM9SF3-205ENST00000485093 TRIM34Q9BYJ4 488 aa7.85□□□□□ -1.15
TM9SF3-205ENST00000485093 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.85□□□□□ -1.15
TM9SF3-205ENST00000485093 MCM6Q14566 821 aa7.84□□□□□ -1.15
TM9SF3-205ENST00000485093 PTCRAQ6ISU1 281 aaPredicted RBP7.84□□□□□ -1.15
TM9SF3-205ENST00000485093 USP17L8P0C7I0 530 aa7.83□□□□□ -1.16
TM9SF3-205ENST00000485093 PLA2G2CQ5R387 149 aa7.83□□□□□ -1.16
TM9SF3-205ENST00000485093 LRRN4Q8WUT4 740 aa7.83□□□□□ -1.16
TM9SF3-205ENST00000485093 PRKD2Q9BZL6 878 aa7.83□□□□□ -1.16
TM9SF3-205ENST00000485093 HMX1Q9NP08 348 aaPredicted RBP7.83□□□□□ -1.16
TM9SF3-205ENST00000485093 PPEF1O14829 653 aaPredicted RBP7.82□□□□□ -1.16
TM9SF3-205ENST00000485093 AP1G2O75843 785 aa7.82□□□□□ -1.16
TM9SF3-205ENST00000485093 KCNH2Q12809 1159 aa7.82□□□□□ -1.16
TM9SF3-205ENST00000485093 HELBQ8NG08 1087 aaPredicted RBP7.82□□□□□ -1.16
TM9SF3-205ENST00000485093 FLIIQ13045 1269 aa7.81□□□□□ -1.16
TM9SF3-205ENST00000485093 EPS8L1Q8TE68 723 aa7.81□□□□□ -1.16
TM9SF3-205ENST00000485093 V9GY48 417 aaPredicted RBP7.81□□□□□ -1.16
TM9SF3-205ENST00000485093 CCNYL3P0C7X3 344 aa7.8□□□□□ -1.16
TM9SF3-205ENST00000485093 NUDT12Q9BQG2 462 aa7.8□□□□□ -1.16
TM9SF3-205ENST00000485093 TREML4Q6UXN2 200 aa7.79□□□□□ -1.16
TM9SF3-205ENST00000485093 FCF1Q9Y324 198 aaKnown RBP7.79□□□□□ -1.16
TM9SF3-205ENST00000485093 LIAT1Q6ZQX7 453 aa7.78□□□□□ -1.16
TM9SF3-205ENST00000485093 GGCXP38435 758 aa7.77□□□□□ -1.17
TM9SF3-205ENST00000485093 RPIAP49247 311 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms