RNA–Protein interactions for RNA: ENST00000484814.1

YIF1A-207, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-207ENST00000484814 SLC4A1APQ9BWU0 796 aaKnown RBP31.86■■■□□ 2.69
YIF1A-207ENST00000484814 EP400Q96L91 3159 aa31.86■■■□□ 2.69
YIF1A-207ENST00000484814 IFT172Q9UG01 1749 aa31.86■■■□□ 2.69
YIF1A-207ENST00000484814 ADAMTS2O95450 1211 aa31.85■■■□□ 2.69
YIF1A-207ENST00000484814 FNBP4Q8N3X1 1017 aaPredicted RBP31.85■■■□□ 2.69
YIF1A-207ENST00000484814 SPATA31E1Q6ZUB1 1445 aa31.84■■■□□ 2.69
YIF1A-207ENST00000484814 NGLY1Q96IV0 654 aa31.84■■■□□ 2.69
YIF1A-207ENST00000484814 ATRNO75882 1429 aa31.83■■■□□ 2.69
YIF1A-207ENST00000484814 ADGRF5Q8IZF2 1346 aa31.8■■■□□ 2.68
YIF1A-207ENST00000484814 KNDC1Q76NI1 1749 aa31.8■■■□□ 2.68
YIF1A-207ENST00000484814 MARF1Q9Y4F3 1742 aaKnown RBP31.8■■■□□ 2.68
YIF1A-207ENST00000484814 USP21Q9UK80 565 aa31.77■■■□□ 2.68
YIF1A-207ENST00000484814 NPHP3Q7Z494 1330 aa31.76■■■□□ 2.68
YIF1A-207ENST00000484814 BCL9LQ86UU0 1499 aa31.76■■■□□ 2.67
YIF1A-207ENST00000484814 FOXD1Q16676 465 aa31.75■■■□□ 2.67
YIF1A-207ENST00000484814 TRPC5Q9UL62 973 aaPredicted RBP31.75■■■□□ 2.67
YIF1A-207ENST00000484814 LRPPRCP42704 1394 aaKnown RBP31.75■■■□□ 2.67
YIF1A-207ENST00000484814 ABCC11Q96J66 1382 aa31.74■■■□□ 2.67
YIF1A-207ENST00000484814 CCDC144AA2RUR9 1427 aa31.73■■■□□ 2.67
YIF1A-207ENST00000484814 PIK3C2GO75747 1445 aa31.73■■■□□ 2.67
YIF1A-207ENST00000484814 ATAD2Q6PL18 1390 aa31.72■■■□□ 2.67
YIF1A-207ENST00000484814 FMN2Q9NZ56 1722 aa31.72■■■□□ 2.67
YIF1A-207ENST00000484814 ANKRD30BQ9BXX2 1392 aa31.71■■■□□ 2.67
YIF1A-207ENST00000484814 ESCO1Q5FWF5 840 aa31.71■■■□□ 2.67
YIF1A-207ENST00000484814 PLEKHH1Q9ULM0 1364 aa31.69■■■□□ 2.66
YIF1A-207ENST00000484814 WAPLQ7Z5K2 1190 aa31.69■■■□□ 2.66
YIF1A-207ENST00000484814 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.69■■■□□ 2.66
YIF1A-207ENST00000484814 FOXO3O43524 673 aa31.67■■■□□ 2.66
YIF1A-207ENST00000484814 KIF1AQ12756 1690 aa31.64■■■□□ 2.66
YIF1A-207ENST00000484814 XPCQ01831 940 aaPredicted RBP31.63■■■□□ 2.65
YIF1A-207ENST00000484814 YTHDC2Q9H6S0 1430 aaKnown RBP31.63■■■□□ 2.65
YIF1A-207ENST00000484814 NRXN1Q9ULB1 1477 aa31.63■■■□□ 2.65
YIF1A-207ENST00000484814 SLIT2O94813 1529 aa31.62■■■□□ 2.65
YIF1A-207ENST00000484814 RGL3Q3MIN7 710 aa31.61■■■□□ 2.65
YIF1A-207ENST00000484814 TMEM132EQ6IEE7 984 aa31.61■■■□□ 2.65
YIF1A-207ENST00000484814 MPHOSPH9Q99550 1183 aa31.61■■■□□ 2.65
YIF1A-207ENST00000484814 STK26Q9P289 416 aa31.61■■■□□ 2.65
YIF1A-207ENST00000484814 SPATA31A3Q5VYP0 1347 aa31.59■■■□□ 2.65
YIF1A-207ENST00000484814 SIRT1Q96EB6 747 aa31.59■■■□□ 2.65
YIF1A-207ENST00000484814 GLI3P10071 1580 aa31.59■■■□□ 2.65
YIF1A-207ENST00000484814 USP32Q8NFA0 1604 aa31.57■■■□□ 2.64
YIF1A-207ENST00000484814 NUTM2FA1L443 756 aa31.56■■■□□ 2.64
YIF1A-207ENST00000484814 GJD4Q96KN9 370 aaPredicted RBP31.56■■■□□ 2.64
YIF1A-207ENST00000484814 RGPD8O14715 1765 aaPredicted RBP31.56■■■□□ 2.64
YIF1A-207ENST00000484814 C14orf93Q9H972 538 aaKnown RBP31.53■■■□□ 2.64
YIF1A-207ENST00000484814 RALGAPBQ86X10 1494 aa31.52■■■□□ 2.64
YIF1A-207ENST00000484814 ABCA3Q99758 1704 aa31.49■■■□□ 2.63
YIF1A-207ENST00000484814 UNC5CLQ8IV45 518 aa31.49■■■□□ 2.63
YIF1A-207ENST00000484814 TNS3Q68CZ2 1445 aa31.49■■■□□ 2.63
YIF1A-207ENST00000484814 CCDC125Q86Z20 511 aa31.48■■■□□ 2.63
YIF1A-207ENST00000484814 BRWD3Q6RI45 1802 aa31.47■■■□□ 2.63
YIF1A-207ENST00000484814 KRT28Q7Z3Y7 464 aa31.46■■■□□ 2.63
YIF1A-207ENST00000484814 NWD2Q9ULI1 1742 aa31.45■■■□□ 2.63
YIF1A-207ENST00000484814 DLC1Q96QB1 1528 aa31.44■■■□□ 2.62
YIF1A-207ENST00000484814 PLCH1Q4KWH8 1693 aa31.44■■■□□ 2.62
YIF1A-207ENST00000484814 ADGRB2O60241 1585 aa31.43■■■□□ 2.62
YIF1A-207ENST00000484814 SBNO1A3KN83 1393 aa31.43■■■□□ 2.62
YIF1A-207ENST00000484814 CFAP70Q5T0N1 1121 aa31.42■■■□□ 2.62
YIF1A-207ENST00000484814 PHF8Q9UPP1 1060 aa31.42■■■□□ 2.62
YIF1A-207ENST00000484814 ADGRB1O14514 1584 aa31.42■■■□□ 2.62
YIF1A-207ENST00000484814 DHX57Q6P158 1386 aaKnown RBP31.4■■■□□ 2.62
YIF1A-207ENST00000484814 ZRANB1Q9UGI0 708 aa31.38■■■□□ 2.61
YIF1A-207ENST00000484814 BLMP54132 1417 aaPredicted RBP31.38■■■□□ 2.61
YIF1A-207ENST00000484814 ANKARQ7Z5J8 1434 aa31.38■■■□□ 2.61
YIF1A-207ENST00000484814 ONECUT3O60422 494 aaPredicted RBP31.37■■■□□ 2.61
YIF1A-207ENST00000484814 TRPM3Q9HCF6 1732 aaPredicted RBP31.37■■■□□ 2.61
YIF1A-207ENST00000484814 ACIN1Q9UKV3 1341 aaKnown RBP31.36■■■□□ 2.61
YIF1A-207ENST00000484814 VPS72Q15906 364 aa31.36■■■□□ 2.61
YIF1A-207ENST00000484814 CABLES1Q8TDN4 633 aa31.35■■■□□ 2.61
YIF1A-207ENST00000484814 PRAM1Q96QH2 718 aa31.35■■■□□ 2.61
YIF1A-207ENST00000484814 NRAPQ86VF7 1730 aa31.33■■■□□ 2.61
YIF1A-207ENST00000484814 ARHGEF10O15013 1369 aa31.32■■■□□ 2.6
YIF1A-207ENST00000484814 PSME1Q06323 249 aa31.32■■■□□ 2.6
YIF1A-207ENST00000484814 ALS2Q96Q42 1657 aa31.32■■■□□ 2.6
YIF1A-207ENST00000484814 SEPT12Q8IYM1 358 aa31.29■■■□□ 2.6
YIF1A-207ENST00000484814 CRYBG1Q9Y4K1 1723 aa31.27■■■□□ 2.6
YIF1A-207ENST00000484814 SAFB2Q14151 953 aaKnown RBP eCLIP31.26■■■□□ 2.59
YIF1A-207ENST00000484814 FAM83GA6ND36 823 aa31.25■■■□□ 2.59
YIF1A-207ENST00000484814 PRR36Q9H6K5 1346 aa31.24■■■□□ 2.59
YIF1A-207ENST00000484814 RAB3GAP2Q9H2M9 1393 aa31.23■■■□□ 2.59
YIF1A-207ENST00000484814 DEFB132Q7Z7B7 95 aa31.23■■■□□ 2.59
YIF1A-207ENST00000484814 TULP4Q9NRJ4 1543 aa31.23■■■□□ 2.59
YIF1A-207ENST00000484814 PMFBP1Q8TBY8 1022 aa31.22■■■□□ 2.59
YIF1A-207ENST00000484814 COL14A1Q05707 1796 aaKnown RBP31.2■■■□□ 2.59
YIF1A-207ENST00000484814 HAP1P54257 671 aaPredicted RBP31.2■■■□□ 2.59
YIF1A-207ENST00000484814 POGKQ9P215 609 aa31.19■■■□□ 2.58
YIF1A-207ENST00000484814 KRT27Q7Z3Y8 459 aa31.17■■■□□ 2.58
YIF1A-207ENST00000484814 LMOD2Q6P5Q4 547 aa31.15■■■□□ 2.58
YIF1A-207ENST00000484814 LRP5O75197 1615 aa31.15■■■□□ 2.58
YIF1A-207ENST00000484814 EIF3AQ14152 1382 aaKnown RBP31.15■■■□□ 2.58
YIF1A-207ENST00000484814 HIRIP3Q9BW71 556 aaPredicted RBP31.14■■■□□ 2.58
YIF1A-207ENST00000484814 TRAK1Q9UPV9 953 aa31.14■■■□□ 2.58
YIF1A-207ENST00000484814 THSD7AQ9UPZ6 1657 aa31.13■■■□□ 2.57
YIF1A-207ENST00000484814 ARHGEF28Q8N1W1 1705 aaKnown RBP31.13■■■□□ 2.57
YIF1A-207ENST00000484814 WASLO00401 505 aaPredicted RBP31.12■■■□□ 2.57
YIF1A-207ENST00000484814 PLEKHG5O94827 1062 aa31.12■■■□□ 2.57
YIF1A-207ENST00000484814 ATP7BP35670 1465 aa31.11■■■□□ 2.57
YIF1A-207ENST00000484814 GPRASP1Q5JY77 1395 aa31.11■■■□□ 2.57
YIF1A-207ENST00000484814 MINK1Q8N4C8 1332 aaPredicted RBP31.11■■■□□ 2.57
YIF1A-207ENST00000484814 BTG4Q9NY30 223 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms