RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 STRCQ7RTU9 1775 aa28.38■■■□□ 2.13
VCPKMT-203ENST00000484763 TULP4Q9NRJ4 1543 aa28.38■■■□□ 2.13
VCPKMT-203ENST00000484763 WAPLQ7Z5K2 1190 aa28.36■■■□□ 2.13
VCPKMT-203ENST00000484763 EVC2Q86UK5 1308 aa28.34■■■□□ 2.13
VCPKMT-203ENST00000484763 MINK1Q8N4C8 1332 aaPredicted RBP28.33■■■□□ 2.13
VCPKMT-203ENST00000484763 NWD1Q149M9 1564 aa28.33■■■□□ 2.13
VCPKMT-203ENST00000484763 MYOM1P52179 1685 aa28.31■■■□□ 2.12
VCPKMT-203ENST00000484763 ADGRB2O60241 1585 aa28.29■■■□□ 2.12
VCPKMT-203ENST00000484763 KCNA6P17658 529 aa28.29■■■□□ 2.12
VCPKMT-203ENST00000484763 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.28■■■□□ 2.12
VCPKMT-203ENST00000484763 PUS7Q96PZ0 661 aaKnown RBP28.27■■■□□ 2.12
VCPKMT-203ENST00000484763 NKTRP30414 1462 aaKnown RBP28.22■■■□□ 2.11
VCPKMT-203ENST00000484763 SRPK2P78362 688 aaKnown RBP28.21■■■□□ 2.11
VCPKMT-203ENST00000484763 CDK19Q9BWU1 502 aa28.2■■■□□ 2.11
VCPKMT-203ENST00000484763 CABP2Q9NPB3 220 aa28.2■■■□□ 2.11
VCPKMT-203ENST00000484763 ATAD2Q6PL18 1390 aa28.2■■■□□ 2.1
VCPKMT-203ENST00000484763 WASLO00401 505 aaPredicted RBP28.18■■■□□ 2.1
VCPKMT-203ENST00000484763 STRCP1A6NGW2 1772 aa28.17■■■□□ 2.1
VCPKMT-203ENST00000484763 NALCNQ8IZF0 1738 aa28.16■■■□□ 2.1
VCPKMT-203ENST00000484763 NINLQ9Y2I6 1382 aa28.16■■■□□ 2.1
VCPKMT-203ENST00000484763 PANK3Q9H999 370 aa28.14■■■□□ 2.1
VCPKMT-203ENST00000484763 DMRT2Q9Y5R5 561 aa28.13■■■□□ 2.09
VCPKMT-203ENST00000484763 TMC1Q8TDI8 760 aa28.12■■■□□ 2.09
VCPKMT-203ENST00000484763 CDC42BPGQ6DT37 1551 aa28.11■■■□□ 2.09
VCPKMT-203ENST00000484763 ADGRL3Q9HAR2 1447 aa28.11■■■□□ 2.09
VCPKMT-203ENST00000484763 ANP32CO43423 234 aa28.11■■■□□ 2.09
VCPKMT-203ENST00000484763 ATP7BP35670 1465 aa28.1■■■□□ 2.09
VCPKMT-203ENST00000484763 MIER1Q8N108 512 aa28.1■■■□□ 2.09
VCPKMT-203ENST00000484763 SLC12A5Q9H2X9 1139 aa28.08■■■□□ 2.09
VCPKMT-203ENST00000484763 FMN2Q9NZ56 1722 aa28.08■■■□□ 2.09
VCPKMT-203ENST00000484763 TOPAZ1Q8N9V7 1692 aa28.07■■■□□ 2.08
VCPKMT-203ENST00000484763 PROSER2Q86WR7 435 aaPredicted RBP28.07■■■□□ 2.08
VCPKMT-203ENST00000484763 PER1O15534 1290 aaPredicted RBP28.06■■■□□ 2.08
VCPKMT-203ENST00000484763 ANKRD36BQ8N2N9 1353 aa28.06■■■□□ 2.08
VCPKMT-203ENST00000484763 NUDT16Q96DE0 195 aaKnown RBP28.05■■■□□ 2.08
VCPKMT-203ENST00000484763 ITSN1Q15811 1721 aa28.05■■■□□ 2.08
VCPKMT-203ENST00000484763 USP32Q8NFA0 1604 aa28.04■■■□□ 2.08
VCPKMT-203ENST00000484763 RBM33Q96EV2 1170 aaKnown RBP28.04■■■□□ 2.08
VCPKMT-203ENST00000484763 PPIP5K1Q6PFW1 1433 aa28.04■■■□□ 2.08
VCPKMT-203ENST00000484763 NCOA3Q9Y6Q9 1424 aa28.03■■■□□ 2.08
VCPKMT-203ENST00000484763 PRR36Q9H6K5 1346 aa28.02■■■□□ 2.08
VCPKMT-203ENST00000484763 ANKARQ7Z5J8 1434 aa28.02■■■□□ 2.08
VCPKMT-203ENST00000484763 C14orf37Q86TY3 774 aa28.02■■■□□ 2.08
VCPKMT-203ENST00000484763 KNSTRNQ9Y448 316 aa28.02■■■□□ 2.08
VCPKMT-203ENST00000484763 CCDC61Q9Y6R9 512 aa28.02■■■□□ 2.08
VCPKMT-203ENST00000484763 CD163L1Q9NR16 1453 aa28.01■■■□□ 2.07
VCPKMT-203ENST00000484763 ZNF335Q9H4Z2 1342 aaPredicted RBP28.01■■■□□ 2.07
VCPKMT-203ENST00000484763 CABP1Q9NZU7 370 aa28■■■□□ 2.07
VCPKMT-203ENST00000484763 A0A1W2PP64 1363 aa28■■■□□ 2.07
VCPKMT-203ENST00000484763 TMEM94Q12767 1356 aa28■■■□□ 2.07
VCPKMT-203ENST00000484763 TERF2IPQ9NYB0 399 aa27.99■■■□□ 2.07
VCPKMT-203ENST00000484763 RGPD8O14715 1765 aaPredicted RBP27.98■■■□□ 2.07
VCPKMT-203ENST00000484763 PRKRIP1Q9H875 184 aaPredicted RBP27.98■■■□□ 2.07
VCPKMT-203ENST00000484763 NSD3Q9BZ95 1437 aa27.98■■■□□ 2.07
VCPKMT-203ENST00000484763 CARD14Q9BXL6 1004 aa27.97■■■□□ 2.07
VCPKMT-203ENST00000484763 XIRP1Q702N8 1843 aaKnown RBP27.97■■■□□ 2.07
VCPKMT-203ENST00000484763 NUTM2FA1L443 756 aa27.96■■■□□ 2.07
VCPKMT-203ENST00000484763 AEBP2Q6ZN18 517 aaPredicted RBP27.96■■■□□ 2.07
VCPKMT-203ENST00000484763 HDGFL2Q7Z4V5 671 aaPredicted RBP27.96■■■□□ 2.07
VCPKMT-203ENST00000484763 KTN1Q86UP2 1357 aaKnown RBP27.95■■■□□ 2.07
VCPKMT-203ENST00000484763 AKAP12Q02952 1782 aa27.95■■■□□ 2.07
VCPKMT-203ENST00000484763 LRRC7Q96NW7 1537 aa27.95■■■□□ 2.06
VCPKMT-203ENST00000484763 DCCP43146 1447 aa27.94■■■□□ 2.06
VCPKMT-203ENST00000484763 NPC1L1Q9UHC9 1359 aa27.94■■■□□ 2.06
VCPKMT-203ENST00000484763 C19orf44Q9H6X5 657 aa27.93■■■□□ 2.06
VCPKMT-203ENST00000484763 MON2Q7Z3U7 1717 aa27.93■■■□□ 2.06
VCPKMT-203ENST00000484763 AMER1Q5JTC6 1135 aaPredicted RBP27.92■■■□□ 2.06
VCPKMT-203ENST00000484763 CPSF1Q10570 1443 aaKnown RBP27.92■■■□□ 2.06
VCPKMT-203ENST00000484763 PLEKHG3A1L390 1219 aa27.9■■■□□ 2.06
VCPKMT-203ENST00000484763 CNGB1Q14028 1251 aaPredicted RBP27.9■■■□□ 2.06
VCPKMT-203ENST00000484763 RALBP1Q15311 655 aa27.89■■■□□ 2.06
VCPKMT-203ENST00000484763 CC2D1BQ5T0F9 858 aaKnown RBP27.89■■■□□ 2.06
VCPKMT-203ENST00000484763 PARD3Q8TEW0 1356 aa27.89■■■□□ 2.06
VCPKMT-203ENST00000484763 MSH6P52701 1360 aa27.88■■■□□ 2.05
VCPKMT-203ENST00000484763 CGNL1Q0VF96 1302 aa27.88■■■□□ 2.05
VCPKMT-203ENST00000484763 CCER2I3L3R5 266 aa27.86■■■□□ 2.05
VCPKMT-203ENST00000484763 EDC4Q6P2E9 1401 aaKnown RBP27.85■■■□□ 2.05
VCPKMT-203ENST00000484763 ACEP12821 1306 aa27.85■■■□□ 2.05
VCPKMT-203ENST00000484763 KIF20BQ96Q89 1820 aa27.85■■■□□ 2.05
VCPKMT-203ENST00000484763 ZNF692Q9BU19 519 aaPredicted RBP27.85■■■□□ 2.05
VCPKMT-203ENST00000484763 POLR3AO14802 1390 aaPredicted RBP27.84■■■□□ 2.05
VCPKMT-203ENST00000484763 NSD2O96028 1365 aa27.84■■■□□ 2.05
VCPKMT-203ENST00000484763 NRKQ7Z2Y5 1582 aa27.84■■■□□ 2.05
VCPKMT-203ENST00000484763 ATF3P18847 181 aa27.84■■■□□ 2.05
VCPKMT-203ENST00000484763 ANKRD26Q9UPS8 1709 aa27.82■■■□□ 2.04
VCPKMT-203ENST00000484763 CADPS2Q86UW7 1296 aa27.81■■■□□ 2.04
VCPKMT-203ENST00000484763 PMFBP1Q8TBY8 1022 aa27.81■■■□□ 2.04
VCPKMT-203ENST00000484763 MST1RQ04912 1400 aa27.81■■■□□ 2.04
VCPKMT-203ENST00000484763 C1orf167Q5SNV9 1468 aa27.81■■■□□ 2.04
VCPKMT-203ENST00000484763 USP6P35125 1406 aa27.8■■■□□ 2.04
VCPKMT-203ENST00000484763 LTBP4Q8N2S1 1624 aa27.8■■■□□ 2.04
VCPKMT-203ENST00000484763 MYBBP1AQ9BQG0 1328 aaKnown RBP27.8■■■□□ 2.04
VCPKMT-203ENST00000484763 KIF1AQ12756 1690 aa27.8■■■□□ 2.04
VCPKMT-203ENST00000484763 NGDNQ8NEJ9 315 aaKnown RBP27.79■■■□□ 2.04
VCPKMT-203ENST00000484763 PHF8Q9UPP1 1060 aa27.78■■■□□ 2.04
VCPKMT-203ENST00000484763 ESCO1Q5FWF5 840 aa27.77■■■□□ 2.04
VCPKMT-203ENST00000484763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.74■■■□□ 2.03
VCPKMT-203ENST00000484763 SSH2Q76I76 1423 aa27.74■■■□□ 2.03
VCPKMT-203ENST00000484763 FYB1O15117 783 aa27.73■■■□□ 2.03
VCPKMT-203ENST00000484763 MORC1Q86VD1 984 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms