RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 DDX17Q92841 729 aaKnown RBP17.04■□□□□ 0.32
SCFD1-206ENST00000484733 ORAI2Q96SN7 254 aa17.03■□□□□ 0.32
SCFD1-206ENST00000484733 CDK12Q9NYV4 1490 aaPredicted RBP17.02■□□□□ 0.31
SCFD1-206ENST00000484733 SIRT1Q96EB6 747 aa17.02■□□□□ 0.31
SCFD1-206ENST00000484733 NRXN1Q9ULB1 1477 aa17.01■□□□□ 0.31
SCFD1-206ENST00000484733 AFF2P51816 1311 aa17■□□□□ 0.31
SCFD1-206ENST00000484733 RXRBP28702 533 aa17■□□□□ 0.31
SCFD1-206ENST00000484733 MYOM2P54296 1465 aa16.99■□□□□ 0.31
SCFD1-206ENST00000484733 C14orf93Q9H972 538 aaKnown RBP16.99■□□□□ 0.31
SCFD1-206ENST00000484733 COL22A1Q8NFW1 1626 aaPredicted RBP16.99■□□□□ 0.31
SCFD1-206ENST00000484733 YTHDC2Q9H6S0 1430 aaKnown RBP16.98■□□□□ 0.31
SCFD1-206ENST00000484733 RAB3GAP2Q9H2M9 1393 aa16.98■□□□□ 0.31
SCFD1-206ENST00000484733 WAPLQ7Z5K2 1190 aa16.97■□□□□ 0.31
SCFD1-206ENST00000484733 STK26Q9P289 416 aa16.97■□□□□ 0.31
SCFD1-206ENST00000484733 NPHP3Q7Z494 1330 aa16.97■□□□□ 0.31
SCFD1-206ENST00000484733 TMEM132EQ6IEE7 984 aa16.97■□□□□ 0.31
SCFD1-206ENST00000484733 ESCO1Q5FWF5 840 aa16.96■□□□□ 0.3
SCFD1-206ENST00000484733 PXDNQ92626 1479 aa16.95■□□□□ 0.3
SCFD1-206ENST00000484733 FMN2Q9NZ56 1722 aa16.95■□□□□ 0.3
SCFD1-206ENST00000484733 PLEKHH1Q9ULM0 1364 aa16.95■□□□□ 0.3
SCFD1-206ENST00000484733 HRCP23327 699 aa16.95■□□□□ 0.3
SCFD1-206ENST00000484733 C8orf37Q96NL8 207 aa16.95■□□□□ 0.3
SCFD1-206ENST00000484733 DHX57Q6P158 1386 aaKnown RBP16.94■□□□□ 0.3
SCFD1-206ENST00000484733 QTRT2Q9H974 415 aaKnown RBP16.93■□□□□ 0.3
SCFD1-206ENST00000484733 RBM6P78332 1123 aaKnown RBP16.92■□□□□ 0.3
SCFD1-206ENST00000484733 KIF1AQ12756 1690 aa16.92■□□□□ 0.3
SCFD1-206ENST00000484733 UPF1Q92900 1129 aaKnown RBP eCLIP16.92■□□□□ 0.3
SCFD1-206ENST00000484733 CFAP70Q5T0N1 1121 aa16.91■□□□□ 0.3
SCFD1-206ENST00000484733 NGLY1Q96IV0 654 aa16.91■□□□□ 0.3
SCFD1-206ENST00000484733 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
SCFD1-206ENST00000484733 ADAMTS2O95450 1211 aa16.91■□□□□ 0.3
SCFD1-206ENST00000484733 FNBP4Q8N3X1 1017 aaPredicted RBP16.9■□□□□ 0.3
SCFD1-206ENST00000484733 FOXO3O43524 673 aa16.9■□□□□ 0.3
SCFD1-206ENST00000484733 STAC3Q96MF2 364 aa16.89■□□□□ 0.29
SCFD1-206ENST00000484733 MARF1Q9Y4F3 1742 aaKnown RBP16.88■□□□□ 0.29
SCFD1-206ENST00000484733 RGS12O14924 1447 aa16.87■□□□□ 0.29
SCFD1-206ENST00000484733 USP21Q9UK80 565 aa16.87■□□□□ 0.29
SCFD1-206ENST00000484733 ADGRB1O14514 1584 aa16.87■□□□□ 0.29
SCFD1-206ENST00000484733 NUTM2FA1L443 756 aa16.86■□□□□ 0.29
SCFD1-206ENST00000484733 TRPC5Q9UL62 973 aaPredicted RBP16.86■□□□□ 0.29
SCFD1-206ENST00000484733 SPATA31A3Q5VYP0 1347 aa16.86■□□□□ 0.29
SCFD1-206ENST00000484733 ATRNO75882 1429 aa16.86■□□□□ 0.29
SCFD1-206ENST00000484733 ADGRB2O60241 1585 aa16.85■□□□□ 0.29
SCFD1-206ENST00000484733 PRAM1Q96QH2 718 aa16.85■□□□□ 0.29
SCFD1-206ENST00000484733 XPCQ01831 940 aaPredicted RBP16.84■□□□□ 0.29
SCFD1-206ENST00000484733 RGPD8O14715 1765 aaPredicted RBP16.84■□□□□ 0.29
SCFD1-206ENST00000484733 KRT28Q7Z3Y7 464 aa16.84■□□□□ 0.29
SCFD1-206ENST00000484733 PHF8Q9UPP1 1060 aa16.84■□□□□ 0.29
SCFD1-206ENST00000484733 ANKARQ7Z5J8 1434 aa16.83■□□□□ 0.29
SCFD1-206ENST00000484733 PSME1Q06323 249 aa16.82■□□□□ 0.28
SCFD1-206ENST00000484733 BCL9LQ86UU0 1499 aa16.82■□□□□ 0.28
SCFD1-206ENST00000484733 SBNO1A3KN83 1393 aa16.82■□□□□ 0.28
SCFD1-206ENST00000484733 POGKQ9P215 609 aa16.81■□□□□ 0.28
SCFD1-206ENST00000484733 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.81■□□□□ 0.28
SCFD1-206ENST00000484733 DCAF11Q8TEB1 546 aa16.8■□□□□ 0.28
SCFD1-206ENST00000484733 TNS3Q68CZ2 1445 aa16.8■□□□□ 0.28
SCFD1-206ENST00000484733 USP32Q8NFA0 1604 aa16.8■□□□□ 0.28
SCFD1-206ENST00000484733 EIF3AQ14152 1382 aaKnown RBP16.79■□□□□ 0.28
SCFD1-206ENST00000484733 SLIT2O94813 1529 aa16.79■□□□□ 0.28
SCFD1-206ENST00000484733 KDM2AQ9Y2K7 1162 aa16.78■□□□□ 0.28
SCFD1-206ENST00000484733 ATAD2Q6PL18 1390 aa16.78■□□□□ 0.28
SCFD1-206ENST00000484733 SAFB2Q14151 953 aaKnown RBP eCLIP16.78■□□□□ 0.28
SCFD1-206ENST00000484733 TRAK1Q9UPV9 953 aa16.78■□□□□ 0.28
SCFD1-206ENST00000484733 ARHGEF10O15013 1369 aa16.76■□□□□ 0.27
SCFD1-206ENST00000484733 UNC5CLQ8IV45 518 aa16.75■□□□□ 0.27
SCFD1-206ENST00000484733 GJD4Q96KN9 370 aaPredicted RBP16.75■□□□□ 0.27
SCFD1-206ENST00000484733 TULP4Q9NRJ4 1543 aa16.75■□□□□ 0.27
SCFD1-206ENST00000484733 WASLO00401 505 aaPredicted RBP16.74■□□□□ 0.27
SCFD1-206ENST00000484733 ABCA3Q99758 1704 aa16.74■□□□□ 0.27
SCFD1-206ENST00000484733 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
SCFD1-206ENST00000484733 ARHGEF28Q8N1W1 1705 aaKnown RBP16.73■□□□□ 0.27
SCFD1-206ENST00000484733 KIAA1210Q9ULL0 1709 aa16.73■□□□□ 0.27
SCFD1-206ENST00000484733 NWD2Q9ULI1 1742 aa16.72■□□□□ 0.27
SCFD1-206ENST00000484733 MINK1Q8N4C8 1332 aaPredicted RBP16.72■□□□□ 0.27
SCFD1-206ENST00000484733 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
SCFD1-206ENST00000484733 PRR36Q9H6K5 1346 aa16.72■□□□□ 0.27
SCFD1-206ENST00000484733 GLI3P10071 1580 aa16.71■□□□□ 0.27
SCFD1-206ENST00000484733 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.27
SCFD1-206ENST00000484733 HIRIP3Q9BW71 556 aaPredicted RBP16.71■□□□□ 0.27
SCFD1-206ENST00000484733 ALS2Q96Q42 1657 aa16.71■□□□□ 0.26
SCFD1-206ENST00000484733 GPRASP1Q5JY77 1395 aa16.7■□□□□ 0.26
SCFD1-206ENST00000484733 PLCH1Q4KWH8 1693 aa16.69■□□□□ 0.26
SCFD1-206ENST00000484733 HAP1P54257 671 aaPredicted RBP16.69■□□□□ 0.26
SCFD1-206ENST00000484733 CCDC125Q86Z20 511 aa16.69■□□□□ 0.26
SCFD1-206ENST00000484733 CABLES1Q8TDN4 633 aa16.69■□□□□ 0.26
SCFD1-206ENST00000484733 VPS72Q15906 364 aa16.69■□□□□ 0.26
SCFD1-206ENST00000484733 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
SCFD1-206ENST00000484733 LMOD2Q6P5Q4 547 aa16.67■□□□□ 0.26
SCFD1-206ENST00000484733 ONECUT3O60422 494 aaPredicted RBP16.66■□□□□ 0.26
SCFD1-206ENST00000484733 ATP7BP35670 1465 aa16.66■□□□□ 0.26
SCFD1-206ENST00000484733 FAM83GA6ND36 823 aa16.65■□□□□ 0.26
SCFD1-206ENST00000484733 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
SCFD1-206ENST00000484733 CRYBG1Q9Y4K1 1723 aa16.65■□□□□ 0.26
SCFD1-206ENST00000484733 NGDNQ8NEJ9 315 aaKnown RBP16.64■□□□□ 0.25
SCFD1-206ENST00000484733 COL14A1Q05707 1796 aaKnown RBP16.64■□□□□ 0.25
SCFD1-206ENST00000484733 NRAPQ86VF7 1730 aa16.64■□□□□ 0.25
SCFD1-206ENST00000484733 BRWD3Q6RI45 1802 aa16.63■□□□□ 0.25
SCFD1-206ENST00000484733 CDK19Q9BWU1 502 aa16.63■□□□□ 0.25
SCFD1-206ENST00000484733 TOPAZ1Q8N9V7 1692 aa16.63■□□□□ 0.25
SCFD1-206ENST00000484733 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms