RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
HLA-DQB1-208ENST00000484729 BCL9LQ86UU0 1499 aa23.21■■□□□ 1.31
HLA-DQB1-208ENST00000484729 MYOM2P54296 1465 aa23.2■■□□□ 1.3
HLA-DQB1-208ENST00000484729 ESCO1Q5FWF5 840 aa23.2■■□□□ 1.3
HLA-DQB1-208ENST00000484729 FOXD1Q16676 465 aa23.19■■□□□ 1.3
HLA-DQB1-208ENST00000484729 NPHP3Q7Z494 1330 aa23.17■■□□□ 1.3
HLA-DQB1-208ENST00000484729 FOXO3O43524 673 aa23.17■■□□□ 1.3
HLA-DQB1-208ENST00000484729 HFM1A2PYH4 1435 aa23.16■■□□□ 1.3
HLA-DQB1-208ENST00000484729 CCDC125Q86Z20 511 aa23.16■■□□□ 1.3
HLA-DQB1-208ENST00000484729 GJD4Q96KN9 370 aaPredicted RBP23.16■■□□□ 1.3
HLA-DQB1-208ENST00000484729 PXDNQ92626 1479 aa23.16■■□□□ 1.3
HLA-DQB1-208ENST00000484729 PRAG1Q86YV5 1406 aa23.15■■□□□ 1.3
HLA-DQB1-208ENST00000484729 NUTM2FA1L443 756 aa23.14■■□□□ 1.29
HLA-DQB1-208ENST00000484729 NAIPQ13075 1403 aa23.13■■□□□ 1.29
HLA-DQB1-208ENST00000484729 MARF1Q9Y4F3 1742 aaKnown RBP23.13■■□□□ 1.29
HLA-DQB1-208ENST00000484729 RPGRIP1LQ68CZ1 1315 aa23.1■■□□□ 1.29
HLA-DQB1-208ENST00000484729 CDC42BPGQ6DT37 1551 aa23.1■■□□□ 1.29
HLA-DQB1-208ENST00000484729 WAPLQ7Z5K2 1190 aa23.08■■□□□ 1.29
HLA-DQB1-208ENST00000484729 STK26Q9P289 416 aa23.08■■□□□ 1.29
HLA-DQB1-208ENST00000484729 PPLO60437 1756 aa23.07■■□□□ 1.28
HLA-DQB1-208ENST00000484729 RALGAPBQ86X10 1494 aa23.07■■□□□ 1.28
HLA-DQB1-208ENST00000484729 DEFB132Q7Z7B7 95 aa23.07■■□□□ 1.28
HLA-DQB1-208ENST00000484729 UNC5CLQ8IV45 518 aa23.07■■□□□ 1.28
HLA-DQB1-208ENST00000484729 GLI3P10071 1580 aa23.06■■□□□ 1.28
HLA-DQB1-208ENST00000484729 BLMP54132 1417 aaPredicted RBP23.05■■□□□ 1.28
HLA-DQB1-208ENST00000484729 LRPPRCP42704 1394 aaKnown RBP23.04■■□□□ 1.28
HLA-DQB1-208ENST00000484729 ADGRF5Q8IZF2 1346 aa23.04■■□□□ 1.28
HLA-DQB1-208ENST00000484729 SLIT2O94813 1529 aa23.03■■□□□ 1.28
HLA-DQB1-208ENST00000484729 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.03■■□□□ 1.28
HLA-DQB1-208ENST00000484729 SLC4A1APQ9BWU0 796 aaKnown RBP23.02■■□□□ 1.28
HLA-DQB1-208ENST00000484729 SPATA31A3Q5VYP0 1347 aa23.02■■□□□ 1.28
HLA-DQB1-208ENST00000484729 PLEKHH1Q9ULM0 1364 aa23.01■■□□□ 1.27
HLA-DQB1-208ENST00000484729 PLEKHG5O94827 1062 aa23.01■■□□□ 1.27
HLA-DQB1-208ENST00000484729 BRWD3Q6RI45 1802 aa23.01■■□□□ 1.27
HLA-DQB1-208ENST00000484729 TMEM132EQ6IEE7 984 aa23■■□□□ 1.27
HLA-DQB1-208ENST00000484729 SEPT12Q8IYM1 358 aa23■■□□□ 1.27
HLA-DQB1-208ENST00000484729 KRT28Q7Z3Y7 464 aa22.99■■□□□ 1.27
HLA-DQB1-208ENST00000484729 RGL3Q3MIN7 710 aa22.98■■□□□ 1.27
HLA-DQB1-208ENST00000484729 CABLES1Q8TDN4 633 aa22.98■■□□□ 1.27
HLA-DQB1-208ENST00000484729 SF3B2Q13435 895 aaKnown RBP22.97■■□□□ 1.27
HLA-DQB1-208ENST00000484729 TECPR2O15040 1411 aa22.97■■□□□ 1.27
HLA-DQB1-208ENST00000484729 USP32Q8NFA0 1604 aa22.97■■□□□ 1.27
HLA-DQB1-208ENST00000484729 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
HLA-DQB1-208ENST00000484729 CCDC9Q9Y3X0 531 aaKnown RBP22.95■■□□□ 1.26
HLA-DQB1-208ENST00000484729 FMN2Q9NZ56 1722 aa22.94■■□□□ 1.26
HLA-DQB1-208ENST00000484729 CCDC144AA2RUR9 1427 aa22.94■■□□□ 1.26
HLA-DQB1-208ENST00000484729 ABCC11Q96J66 1382 aa22.94■■□□□ 1.26
HLA-DQB1-208ENST00000484729 VPS72Q15906 364 aa22.94■■□□□ 1.26
HLA-DQB1-208ENST00000484729 KIF1AQ12756 1690 aa22.92■■□□□ 1.26
HLA-DQB1-208ENST00000484729 PSDA5PKW4 1024 aaPredicted RBP22.91■■□□□ 1.26
HLA-DQB1-208ENST00000484729 KRT27Q7Z3Y8 459 aa22.91■■□□□ 1.26
HLA-DQB1-208ENST00000484729 ONECUT3O60422 494 aaPredicted RBP22.9■■□□□ 1.26
HLA-DQB1-208ENST00000484729 LMOD2Q6P5Q4 547 aa22.9■■□□□ 1.26
HLA-DQB1-208ENST00000484729 PHF8Q9UPP1 1060 aa22.9■■□□□ 1.26
HLA-DQB1-208ENST00000484729 TNS3Q68CZ2 1445 aa22.9■■□□□ 1.26
HLA-DQB1-208ENST00000484729 KNDC1Q76NI1 1749 aa22.89■■□□□ 1.26
HLA-DQB1-208ENST00000484729 PLCH1Q4KWH8 1693 aa22.89■■□□□ 1.25
HLA-DQB1-208ENST00000484729 PSME1Q06323 249 aa22.88■■□□□ 1.25
HLA-DQB1-208ENST00000484729 SPATA31E1Q6ZUB1 1445 aa22.88■■□□□ 1.25
HLA-DQB1-208ENST00000484729 YTHDC2Q9H6S0 1430 aaKnown RBP22.88■■□□□ 1.25
HLA-DQB1-208ENST00000484729 RGPD8O14715 1765 aaPredicted RBP22.88■■□□□ 1.25
HLA-DQB1-208ENST00000484729 ANKRD30BQ9BXX2 1392 aa22.88■■□□□ 1.25
HLA-DQB1-208ENST00000484729 LRP5O75197 1615 aa22.87■■□□□ 1.25
HLA-DQB1-208ENST00000484729 A0A0G2JS52 829 aa22.87■■□□□ 1.25
HLA-DQB1-208ENST00000484729 MYT1Q01538 1121 aa22.87■■□□□ 1.25
HLA-DQB1-208ENST00000484729 FAM83GA6ND36 823 aa22.86■■□□□ 1.25
HLA-DQB1-208ENST00000484729 IFT172Q9UG01 1749 aa22.85■■□□□ 1.25
HLA-DQB1-208ENST00000484729 PIK3C2GO75747 1445 aa22.85■■□□□ 1.25
HLA-DQB1-208ENST00000484729 NWD2Q9ULI1 1742 aa22.85■■□□□ 1.25
HLA-DQB1-208ENST00000484729 ABCA3Q99758 1704 aa22.83■■□□□ 1.25
HLA-DQB1-208ENST00000484729 HRCP23327 699 aa22.83■■□□□ 1.25
HLA-DQB1-208ENST00000484729 BAG6P46379 1132 aa22.83■■□□□ 1.25
HLA-DQB1-208ENST00000484729 SAFB2Q14151 953 aaKnown RBP eCLIP22.83■■□□□ 1.25
HLA-DQB1-208ENST00000484729 FAM98CQ17RN3 349 aaKnown RBP22.83■■□□□ 1.25
HLA-DQB1-208ENST00000484729 SBNO1A3KN83 1393 aa22.83■■□□□ 1.25
HLA-DQB1-208ENST00000484729 NRXN1Q9ULB1 1477 aa22.81■■□□□ 1.24
HLA-DQB1-208ENST00000484729 PMFBP1Q8TBY8 1022 aa22.81■■□□□ 1.24
HLA-DQB1-208ENST00000484729 SIRT1Q96EB6 747 aa22.81■■□□□ 1.24
HLA-DQB1-208ENST00000484729 ARHGEF10O15013 1369 aa22.8■■□□□ 1.24
HLA-DQB1-208ENST00000484729 FAM182BQ5T319 152 aa22.8■■□□□ 1.24
HLA-DQB1-208ENST00000484729 EN1Q05925 392 aaPredicted RBP22.79■■□□□ 1.24
HLA-DQB1-208ENST00000484729 CFAP70Q5T0N1 1121 aa22.78■■□□□ 1.24
HLA-DQB1-208ENST00000484729 PRAM1Q96QH2 718 aa22.78■■□□□ 1.24
HLA-DQB1-208ENST00000484729 MPHOSPH9Q99550 1183 aa22.78■■□□□ 1.24
HLA-DQB1-208ENST00000484729 C14orf93Q9H972 538 aaKnown RBP22.78■■□□□ 1.24
HLA-DQB1-208ENST00000484729 BTG4Q9NY30 223 aa22.78■■□□□ 1.24
HLA-DQB1-208ENST00000484729 NRAPQ86VF7 1730 aa22.76■■□□□ 1.23
HLA-DQB1-208ENST00000484729 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
HLA-DQB1-208ENST00000484729 R3HDM1Q15032 1099 aaKnown RBP22.74■■□□□ 1.23
HLA-DQB1-208ENST00000484729 POGKQ9P215 609 aa22.71■■□□□ 1.23
HLA-DQB1-208ENST00000484729 HIRIP3Q9BW71 556 aaPredicted RBP22.7■■□□□ 1.22
HLA-DQB1-208ENST00000484729 RGPD1P0DJD0 1748 aa22.69■■□□□ 1.22
HLA-DQB1-208ENST00000484729 TRPM3Q9HCF6 1732 aaPredicted RBP22.69■■□□□ 1.22
HLA-DQB1-208ENST00000484729 ANKARQ7Z5J8 1434 aa22.69■■□□□ 1.22
HLA-DQB1-208ENST00000484729 SPATA31A5Q5VU36 1347 aa22.69■■□□□ 1.22
HLA-DQB1-208ENST00000484729 SPATA31A7Q8IWB4 1347 aa22.69■■□□□ 1.22
HLA-DQB1-208ENST00000484729 COL14A1Q05707 1796 aaKnown RBP22.68■■□□□ 1.22
HLA-DQB1-208ENST00000484729 EZH2Q15910 746 aaKnown RBP22.68■■□□□ 1.22
HLA-DQB1-208ENST00000484729 GPRASP1Q5JY77 1395 aa22.66■■□□□ 1.22
HLA-DQB1-208ENST00000484729 ALS2Q96Q42 1657 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms