RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 NUTM2AQ8IVF1 878 aaPredicted RBP20.23■□□□□ 0.83
ITGA4-210ENST00000484404 YTHDC2Q9H6S0 1430 aaKnown RBP20.23■□□□□ 0.83
ITGA4-210ENST00000484404 TECPR2O15040 1411 aa20.22■□□□□ 0.83
ITGA4-210ENST00000484404 MEX3CQ5U5Q3 659 aaKnown RBP20.22■□□□□ 0.83
ITGA4-210ENST00000484404 POTEAQ6S8J7 498 aa20.22■□□□□ 0.83
ITGA4-210ENST00000484404 ORAI2Q96SN7 254 aa20.22■□□□□ 0.83
ITGA4-210ENST00000484404 NUTM2FA1L443 756 aa20.21■□□□□ 0.83
ITGA4-210ENST00000484404 CFAP70Q5T0N1 1121 aa20.21■□□□□ 0.83
ITGA4-210ENST00000484404 SPATA31A6Q5VVP1 1343 aa20.19■□□□□ 0.82
ITGA4-210ENST00000484404 KDM2AQ9Y2K7 1162 aa20.18■□□□□ 0.82
ITGA4-210ENST00000484404 ABCC11Q96J66 1382 aa20.17■□□□□ 0.82
ITGA4-210ENST00000484404 SAFB2Q14151 953 aaKnown RBP eCLIP20.16■□□□□ 0.82
ITGA4-210ENST00000484404 PNPLA6Q8IY17 1366 aa20.16■□□□□ 0.82
ITGA4-210ENST00000484404 C14orf93Q9H972 538 aaKnown RBP20.15■□□□□ 0.82
ITGA4-210ENST00000484404 ADGRB1O14514 1584 aa20.14■□□□□ 0.81
ITGA4-210ENST00000484404 ESCO1Q5FWF5 840 aa20.14■□□□□ 0.81
ITGA4-210ENST00000484404 DCAF11Q8TEB1 546 aa20.14■□□□□ 0.81
ITGA4-210ENST00000484404 KIF1AQ12756 1690 aa20.13■□□□□ 0.81
ITGA4-210ENST00000484404 DHX57Q6P158 1386 aaKnown RBP20.13■□□□□ 0.81
ITGA4-210ENST00000484404 XPCQ01831 940 aaPredicted RBP20.13■□□□□ 0.81
ITGA4-210ENST00000484404 LRRC59Q96AG4 307 aaKnown RBP20.13■□□□□ 0.81
ITGA4-210ENST00000484404 ARHGEF28Q8N1W1 1705 aaKnown RBP20.13■□□□□ 0.81
ITGA4-210ENST00000484404 MARF1Q9Y4F3 1742 aaKnown RBP20.12■□□□□ 0.81
ITGA4-210ENST00000484404 COL22A1Q8NFW1 1626 aaPredicted RBP20.11■□□□□ 0.81
ITGA4-210ENST00000484404 PXDNQ92626 1479 aa20.11■□□□□ 0.81
ITGA4-210ENST00000484404 USP32Q8NFA0 1604 aa20.1■□□□□ 0.81
ITGA4-210ENST00000484404 HRCP23327 699 aa20.1■□□□□ 0.81
ITGA4-210ENST00000484404 DLC1Q96QB1 1528 aa20.09■□□□□ 0.81
ITGA4-210ENST00000484404 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
ITGA4-210ENST00000484404 SOS2Q07890 1332 aaPredicted RBP20.08■□□□□ 0.81
ITGA4-210ENST00000484404 C8orf37Q96NL8 207 aa20.07■□□□□ 0.8
ITGA4-210ENST00000484404 TRAK1Q9UPV9 953 aa20.07■□□□□ 0.8
ITGA4-210ENST00000484404 ADGRB2O60241 1585 aa20.07■□□□□ 0.8
ITGA4-210ENST00000484404 AFF2P51816 1311 aa20.06■□□□□ 0.8
ITGA4-210ENST00000484404 FOXO3O43524 673 aa20.06■□□□□ 0.8
ITGA4-210ENST00000484404 ADAMTS2O95450 1211 aa20.06■□□□□ 0.8
ITGA4-210ENST00000484404 POGKQ9P215 609 aa20.06■□□□□ 0.8
ITGA4-210ENST00000484404 NPHP3Q7Z494 1330 aa20.04■□□□□ 0.8
ITGA4-210ENST00000484404 HIRIP3Q9BW71 556 aaPredicted RBP20.04■□□□□ 0.8
ITGA4-210ENST00000484404 KIAA1210Q9ULL0 1709 aa20.04■□□□□ 0.8
ITGA4-210ENST00000484404 ABCA3Q99758 1704 aa20.03■□□□□ 0.8
ITGA4-210ENST00000484404 ZNF772Q68DY9 489 aaPredicted RBP20.03■□□□□ 0.8
ITGA4-210ENST00000484404 MINK1Q8N4C8 1332 aaPredicted RBP20.02■□□□□ 0.8
ITGA4-210ENST00000484404 PLEKHG5O94827 1062 aa20.01■□□□□ 0.79
ITGA4-210ENST00000484404 SIRT1Q96EB6 747 aa20■□□□□ 0.79
ITGA4-210ENST00000484404 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
ITGA4-210ENST00000484404 TRPM3Q9HCF6 1732 aaPredicted RBP19.97■□□□□ 0.79
ITGA4-210ENST00000484404 NGLY1Q96IV0 654 aa19.97■□□□□ 0.79
ITGA4-210ENST00000484404 PHF8Q9UPP1 1060 aa19.97■□□□□ 0.79
ITGA4-210ENST00000484404 TULP4Q9NRJ4 1543 aa19.97■□□□□ 0.79
ITGA4-210ENST00000484404 PMFBP1Q8TBY8 1022 aa19.96■□□□□ 0.79
ITGA4-210ENST00000484404 RXRBP28702 533 aa19.95■□□□□ 0.78
ITGA4-210ENST00000484404 KRT28Q7Z3Y7 464 aa19.95■□□□□ 0.78
ITGA4-210ENST00000484404 PLCH1Q4KWH8 1693 aa19.94■□□□□ 0.78
ITGA4-210ENST00000484404 QRICH2Q9H0J4 1663 aa19.94■□□□□ 0.78
ITGA4-210ENST00000484404 TNS3Q68CZ2 1445 aa19.93■□□□□ 0.78
ITGA4-210ENST00000484404 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
ITGA4-210ENST00000484404 SIN3AQ96ST3 1273 aa19.93■□□□□ 0.78
ITGA4-210ENST00000484404 PRR36Q9H6K5 1346 aa19.93■□□□□ 0.78
ITGA4-210ENST00000484404 RGS12O14924 1447 aa19.93■□□□□ 0.78
ITGA4-210ENST00000484404 TRPM1Q7Z4N2 1603 aa19.92■□□□□ 0.78
ITGA4-210ENST00000484404 TOPAZ1Q8N9V7 1692 aa19.92■□□□□ 0.78
ITGA4-210ENST00000484404 ALS2Q96Q42 1657 aa19.92■□□□□ 0.78
ITGA4-210ENST00000484404 LMOD2Q6P5Q4 547 aa19.92■□□□□ 0.78
ITGA4-210ENST00000484404 QTRT2Q9H974 415 aaKnown RBP19.92■□□□□ 0.78
ITGA4-210ENST00000484404 SPATA31A3Q5VYP0 1347 aa19.92■□□□□ 0.78
ITGA4-210ENST00000484404 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.91■□□□□ 0.78
ITGA4-210ENST00000484404 NBPF1Q3BBV0 1214 aa19.91■□□□□ 0.78
ITGA4-210ENST00000484404 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
ITGA4-210ENST00000484404 STAC3Q96MF2 364 aa19.9■□□□□ 0.78
ITGA4-210ENST00000484404 USP21Q9UK80 565 aa19.9■□□□□ 0.78
ITGA4-210ENST00000484404 ATP7BP35670 1465 aa19.89■□□□□ 0.77
ITGA4-210ENST00000484404 CABLES1Q8TDN4 633 aa19.89■□□□□ 0.77
ITGA4-210ENST00000484404 CRYBG1Q9Y4K1 1723 aa19.88■□□□□ 0.77
ITGA4-210ENST00000484404 CDK12Q9NYV4 1490 aaPredicted RBP19.88■□□□□ 0.77
ITGA4-210ENST00000484404 WASLO00401 505 aaPredicted RBP19.88■□□□□ 0.77
ITGA4-210ENST00000484404 PSME1Q06323 249 aa19.88■□□□□ 0.77
ITGA4-210ENST00000484404 EIF3AQ14152 1382 aaKnown RBP19.86■□□□□ 0.77
ITGA4-210ENST00000484404 HAP1P54257 671 aaPredicted RBP19.86■□□□□ 0.77
ITGA4-210ENST00000484404 RBM6P78332 1123 aaKnown RBP19.86■□□□□ 0.77
ITGA4-210ENST00000484404 L3MBTL2Q969R5 705 aa19.86■□□□□ 0.77
ITGA4-210ENST00000484404 ATRNO75882 1429 aa19.85■□□□□ 0.77
ITGA4-210ENST00000484404 BCL9LQ86UU0 1499 aa19.85■□□□□ 0.77
ITGA4-210ENST00000484404 SBNO1A3KN83 1393 aa19.84■□□□□ 0.77
ITGA4-210ENST00000484404 NWD2Q9ULI1 1742 aa19.84■□□□□ 0.77
ITGA4-210ENST00000484404 BRWD3Q6RI45 1802 aa19.83■□□□□ 0.77
ITGA4-210ENST00000484404 FNBP4Q8N3X1 1017 aaPredicted RBP19.83■□□□□ 0.77
ITGA4-210ENST00000484404 PHRF1Q9P1Y6 1649 aaKnown RBP19.83■□□□□ 0.76
ITGA4-210ENST00000484404 TRPC5Q9UL62 973 aaPredicted RBP19.82■□□□□ 0.76
ITGA4-210ENST00000484404 GLI3P10071 1580 aa19.82■□□□□ 0.76
ITGA4-210ENST00000484404 NRAPQ86VF7 1730 aa19.82■□□□□ 0.76
ITGA4-210ENST00000484404 GPRASP1Q5JY77 1395 aa19.82■□□□□ 0.76
ITGA4-210ENST00000484404 NGDNQ8NEJ9 315 aaKnown RBP19.81■□□□□ 0.76
ITGA4-210ENST00000484404 NUDT16Q96DE0 195 aaKnown RBP19.81■□□□□ 0.76
ITGA4-210ENST00000484404 CDK19Q9BWU1 502 aa19.81■□□□□ 0.76
ITGA4-210ENST00000484404 ARHGEF10O15013 1369 aa19.81■□□□□ 0.76
ITGA4-210ENST00000484404 PAK3O75914 559 aaPredicted RBP19.8■□□□□ 0.76
ITGA4-210ENST00000484404 UPF1Q92900 1129 aaKnown RBP eCLIP19.8■□□□□ 0.76
ITGA4-210ENST00000484404 SLIT2O94813 1529 aa19.8■□□□□ 0.76
ITGA4-210ENST00000484404 COL14A1Q05707 1796 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms