RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 DAAM2Q86T65 1068 aa11.4□□□□□ -0.58
ALMS1-204ENST00000484298 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.4□□□□□ -0.58
ALMS1-204ENST00000484298 V9GYY5 206 aaPredicted RBP11.4□□□□□ -0.58
ALMS1-204ENST00000484298 UQCRHLA0A096LP55 91 aa11.4□□□□□ -0.59
ALMS1-204ENST00000484298 UQCRHP07919 91 aa11.4□□□□□ -0.59
ALMS1-204ENST00000484298 KLHL34Q8N239 644 aa11.4□□□□□ -0.59
ALMS1-204ENST00000484298 SMC2O95347 1197 aa11.39□□□□□ -0.59
ALMS1-204ENST00000484298 HDGFP51858 240 aaKnown RBP11.39□□□□□ -0.59
ALMS1-204ENST00000484298 SMC3Q9UQE7 1217 aa11.39□□□□□ -0.59
ALMS1-204ENST00000484298 PDCP20941 246 aa11.39□□□□□ -0.59
ALMS1-204ENST00000484298 SDF4Q9BRK5 362 aa11.39□□□□□ -0.59
ALMS1-204ENST00000484298 CRACR2AQ9BSW2 395 aa11.39□□□□□ -0.59
ALMS1-204ENST00000484298 CFAP45Q9UL16 551 aa11.39□□□□□ -0.59
ALMS1-204ENST00000484298 ROCK2O75116 1388 aaKnown RBP11.39□□□□□ -0.59
ALMS1-204ENST00000484298 IRX3P78415 501 aaPredicted RBP11.39□□□□□ -0.59
ALMS1-204ENST00000484298 HDGFL2Q7Z4V5 671 aaPredicted RBP11.39□□□□□ -0.59
ALMS1-204ENST00000484298 GOLGA3Q08378 1498 aa11.39□□□□□ -0.59
ALMS1-204ENST00000484298 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
ALMS1-204ENST00000484298 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.38□□□□□ -0.59
ALMS1-204ENST00000484298 MSH5O43196 834 aa11.38□□□□□ -0.59
ALMS1-204ENST00000484298 TSPY26PQ9H489 355 aa11.38□□□□□ -0.59
ALMS1-204ENST00000484298 VPS37CA5D8V6 355 aaPredicted RBP11.38□□□□□ -0.59
ALMS1-204ENST00000484298 RILPL2Q969X0 211 aa11.38□□□□□ -0.59
ALMS1-204ENST00000484298 SRPK2P78362 688 aaKnown RBP11.38□□□□□ -0.59
ALMS1-204ENST00000484298 SMC1AQ14683 1233 aaKnown RBP11.38□□□□□ -0.59
ALMS1-204ENST00000484298 CPSF2Q9P2I0 782 aaKnown RBP11.38□□□□□ -0.59
ALMS1-204ENST00000484298 U2AF1L5P0DN76 240 aaPredicted RBP11.37□□□□□ -0.59
ALMS1-204ENST00000484298 U2AF1Q01081 240 aaKnown RBP eCLIP11.37□□□□□ -0.59
ALMS1-204ENST00000484298 PAIP2Q9BPZ3 127 aaKnown RBP11.37□□□□□ -0.59
ALMS1-204ENST00000484298 KIF3CO14782 793 aa11.37□□□□□ -0.59
ALMS1-204ENST00000484298 IPO4Q8TEX9 1081 aaKnown RBP11.37□□□□□ -0.59
ALMS1-204ENST00000484298 C6orf163Q5TEZ5 329 aa11.37□□□□□ -0.59
ALMS1-204ENST00000484298 ANO2Q9NQ90 1003 aa11.37□□□□□ -0.59
ALMS1-204ENST00000484298 WWC2Q6AWC2 1192 aa11.36□□□□□ -0.59
ALMS1-204ENST00000484298 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
ALMS1-204ENST00000484298 FBXW7Q969H0 707 aa11.36□□□□□ -0.59
ALMS1-204ENST00000484298 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
ALMS1-204ENST00000484298 ZWINTO95229 277 aa11.36□□□□□ -0.59
ALMS1-204ENST00000484298 STIM1Q13586 685 aa11.36□□□□□ -0.59
ALMS1-204ENST00000484298 CWC22Q9HCG8 908 aaKnown RBP11.36□□□□□ -0.59
ALMS1-204ENST00000484298 SPECC1LQ69YQ0 1117 aa11.35□□□□□ -0.59
ALMS1-204ENST00000484298 HMGB1P1B2RPK0 211 aaPredicted RBP11.35□□□□□ -0.59
ALMS1-204ENST00000484298 RBM10P98175 930 aaKnown RBP11.35□□□□□ -0.59
ALMS1-204ENST00000484298 DACH1Q9UI36 760 aa11.35□□□□□ -0.59
ALMS1-204ENST00000484298 KAT6BQ8WYB5 2073 aa11.35□□□□□ -0.59
ALMS1-204ENST00000484298 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
ALMS1-204ENST00000484298 CCDC192P0DO97 292 aa11.35□□□□□ -0.59
ALMS1-204ENST00000484298 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
ALMS1-204ENST00000484298 HSP90AB4PQ58FF6 505 aa11.35□□□□□ -0.59
ALMS1-204ENST00000484298 CBFA2T2O43439 604 aa11.34□□□□□ -0.59
ALMS1-204ENST00000484298 STK26Q9P289 416 aa11.34□□□□□ -0.59
ALMS1-204ENST00000484298 GCOM1H8Y6P7 765 aaPredicted RBP11.34□□□□□ -0.59
ALMS1-204ENST00000484298 MYZAPP0CAP1 466 aa11.34□□□□□ -0.59
ALMS1-204ENST00000484298 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
ALMS1-204ENST00000484298 INTS3Q68E01 1043 aaKnown RBP11.34□□□□□ -0.59
ALMS1-204ENST00000484298 SLC4A10Q6U841 1118 aa11.34□□□□□ -0.59
ALMS1-204ENST00000484298 BMS1Q14692 1282 aaKnown RBP11.34□□□□□ -0.59
ALMS1-204ENST00000484298 NFXL1Q6ZNB6 911 aa11.34□□□□□ -0.59
ALMS1-204ENST00000484298 JAKMIP3Q5VZ66 844 aa11.34□□□□□ -0.59
ALMS1-204ENST00000484298 DDX46Q7L014 1031 aaKnown RBP11.34□□□□□ -0.59
ALMS1-204ENST00000484298 AAMPQ13685 434 aa11.34□□□□□ -0.59
ALMS1-204ENST00000484298 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
ALMS1-204ENST00000484298 MNAT1P51948 309 aa11.33□□□□□ -0.6
ALMS1-204ENST00000484298 GTF2A1P52655 376 aaPredicted RBP11.33□□□□□ -0.6
ALMS1-204ENST00000484298 FAM193AP78312 1265 aa11.33□□□□□ -0.6
ALMS1-204ENST00000484298 LRRFIP2Q9Y608 721 aaKnown RBP11.33□□□□□ -0.6
ALMS1-204ENST00000484298 CGNQ9P2M7 1197 aaKnown RBP11.33□□□□□ -0.6
ALMS1-204ENST00000484298 NINLQ9Y2I6 1382 aa11.33□□□□□ -0.6
ALMS1-204ENST00000484298 CTR9Q6PD62 1173 aa11.32□□□□□ -0.6
ALMS1-204ENST00000484298 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
ALMS1-204ENST00000484298 ANKRD45Q5TZF3 282 aa11.32□□□□□ -0.6
ALMS1-204ENST00000484298 PSMA5P28066 241 aa11.32□□□□□ -0.6
ALMS1-204ENST00000484298 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
ALMS1-204ENST00000484298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
ALMS1-204ENST00000484298 RBM25P49756 843 aaKnown RBP11.32□□□□□ -0.6
ALMS1-204ENST00000484298 UBXN4Q92575 508 aa11.32□□□□□ -0.6
ALMS1-204ENST00000484298 PLEKHD1A6NEE1 506 aa11.32□□□□□ -0.6
ALMS1-204ENST00000484298 VGFO15240 615 aaPredicted RBP11.32□□□□□ -0.6
ALMS1-204ENST00000484298 DZIP1LQ8IYY4 767 aaKnown RBP11.32□□□□□ -0.6
ALMS1-204ENST00000484298 CCDC148Q8NFR7 591 aa11.32□□□□□ -0.6
ALMS1-204ENST00000484298 TIGD1Q96MW7 591 aa11.32□□□□□ -0.6
ALMS1-204ENST00000484298 CEP162Q5TB80 1403 aa11.32□□□□□ -0.6
ALMS1-204ENST00000484298 DNAAF4Q8WXU2 420 aa11.32□□□□□ -0.6
ALMS1-204ENST00000484298 CDK5RAP3Q96JB5 506 aa11.31□□□□□ -0.6
ALMS1-204ENST00000484298 NFKBIBQ15653 356 aa11.31□□□□□ -0.6
ALMS1-204ENST00000484298 TRIM21P19474 475 aaKnown RBP11.31□□□□□ -0.6
ALMS1-204ENST00000484298 NAP1L3Q99457 506 aaPredicted RBP11.31□□□□□ -0.6
ALMS1-204ENST00000484298 MCM2P49736 904 aa11.31□□□□□ -0.6
ALMS1-204ENST00000484298 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
ALMS1-204ENST00000484298 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
ALMS1-204ENST00000484298 ZNF396Q96N95 335 aaPredicted RBP11.31□□□□□ -0.6
ALMS1-204ENST00000484298 PDCL3Q9H2J4 239 aa11.31□□□□□ -0.6
ALMS1-204ENST00000484298 FAM184BQ9ULE4 1060 aa11.31□□□□□ -0.6
ALMS1-204ENST00000484298 SERPINC1P01008 464 aa11.3□□□□□ -0.6
ALMS1-204ENST00000484298 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
ALMS1-204ENST00000484298 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
ALMS1-204ENST00000484298 SUDS3Q9H7L9 328 aaPredicted RBP11.3□□□□□ -0.6
ALMS1-204ENST00000484298 DDX19BQ9UMR2 479 aa11.3□□□□□ -0.6
ALMS1-204ENST00000484298 SCRIBQ14160 1630 aa11.3□□□□□ -0.6
ALMS1-204ENST00000484298 CETN2P41208 172 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms