RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 PXDNQ92626 1479 aa19.46■□□□□ 0.71
DNMT3A-213ENST00000484184 HFM1A2PYH4 1435 aa19.45■□□□□ 0.7
DNMT3A-213ENST00000484184 ZRANB1Q9UGI0 708 aa19.44■□□□□ 0.7
DNMT3A-213ENST00000484184 MARF1Q9Y4F3 1742 aaKnown RBP19.43■□□□□ 0.7
DNMT3A-213ENST00000484184 CDC42BPGQ6DT37 1551 aa19.43■□□□□ 0.7
DNMT3A-213ENST00000484184 NPHP3Q7Z494 1330 aa19.42■□□□□ 0.7
DNMT3A-213ENST00000484184 NAIPQ13075 1403 aa19.42■□□□□ 0.7
DNMT3A-213ENST00000484184 ESCO1Q5FWF5 840 aa19.41■□□□□ 0.7
DNMT3A-213ENST00000484184 CCDC125Q86Z20 511 aa19.41■□□□□ 0.7
DNMT3A-213ENST00000484184 RPGRIP1LQ68CZ1 1315 aa19.41■□□□□ 0.7
DNMT3A-213ENST00000484184 PPLO60437 1756 aa19.41■□□□□ 0.7
DNMT3A-213ENST00000484184 FOXO3O43524 673 aa19.4■□□□□ 0.7
DNMT3A-213ENST00000484184 PPARGC1BQ86YN6 1023 aaKnown RBP19.4■□□□□ 0.7
DNMT3A-213ENST00000484184 GJD4Q96KN9 370 aaPredicted RBP19.4■□□□□ 0.7
DNMT3A-213ENST00000484184 XPCQ01831 940 aaPredicted RBP19.39■□□□□ 0.69
DNMT3A-213ENST00000484184 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.37■□□□□ 0.69
DNMT3A-213ENST00000484184 GLI3P10071 1580 aa19.36■□□□□ 0.69
DNMT3A-213ENST00000484184 SLIT2O94813 1529 aa19.36■□□□□ 0.69
DNMT3A-213ENST00000484184 FOXD1Q16676 465 aa19.36■□□□□ 0.69
DNMT3A-213ENST00000484184 TECPR2O15040 1411 aa19.34■□□□□ 0.69
DNMT3A-213ENST00000484184 WAPLQ7Z5K2 1190 aa19.34■□□□□ 0.69
DNMT3A-213ENST00000484184 RALGAPBQ86X10 1494 aa19.34■□□□□ 0.69
DNMT3A-213ENST00000484184 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
DNMT3A-213ENST00000484184 ADGRF5Q8IZF2 1346 aa19.33■□□□□ 0.69
DNMT3A-213ENST00000484184 UNC5CLQ8IV45 518 aa19.33■□□□□ 0.68
DNMT3A-213ENST00000484184 SPATA31A3Q5VYP0 1347 aa19.32■□□□□ 0.68
DNMT3A-213ENST00000484184 NUTM2FA1L443 756 aa19.32■□□□□ 0.68
DNMT3A-213ENST00000484184 BLMP54132 1417 aaPredicted RBP19.32■□□□□ 0.68
DNMT3A-213ENST00000484184 BRWD3Q6RI45 1802 aa19.32■□□□□ 0.68
DNMT3A-213ENST00000484184 LRPPRCP42704 1394 aaKnown RBP19.32■□□□□ 0.68
DNMT3A-213ENST00000484184 PLEKHH1Q9ULM0 1364 aa19.31■□□□□ 0.68
DNMT3A-213ENST00000484184 ABCC11Q96J66 1382 aa19.3■□□□□ 0.68
DNMT3A-213ENST00000484184 DEFB132Q7Z7B7 95 aa19.29■□□□□ 0.68
DNMT3A-213ENST00000484184 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
DNMT3A-213ENST00000484184 STK26Q9P289 416 aa19.29■□□□□ 0.68
DNMT3A-213ENST00000484184 FMN2Q9NZ56 1722 aa19.28■□□□□ 0.68
DNMT3A-213ENST00000484184 USP32Q8NFA0 1604 aa19.28■□□□□ 0.68
DNMT3A-213ENST00000484184 KNDC1Q76NI1 1749 aa19.27■□□□□ 0.68
DNMT3A-213ENST00000484184 SPATA31E1Q6ZUB1 1445 aa19.26■□□□□ 0.67
DNMT3A-213ENST00000484184 TMEM132EQ6IEE7 984 aa19.26■□□□□ 0.67
DNMT3A-213ENST00000484184 KIF1AQ12756 1690 aa19.26■□□□□ 0.67
DNMT3A-213ENST00000484184 IFT172Q9UG01 1749 aa19.25■□□□□ 0.67
DNMT3A-213ENST00000484184 ONECUT3O60422 494 aaPredicted RBP19.25■□□□□ 0.67
DNMT3A-213ENST00000484184 SEPT12Q8IYM1 358 aa19.25■□□□□ 0.67
DNMT3A-213ENST00000484184 CCDC144AA2RUR9 1427 aa19.25■□□□□ 0.67
DNMT3A-213ENST00000484184 KRT28Q7Z3Y7 464 aa19.24■□□□□ 0.67
DNMT3A-213ENST00000484184 VPS72Q15906 364 aa19.23■□□□□ 0.67
DNMT3A-213ENST00000484184 RGPD8O14715 1765 aaPredicted RBP19.22■□□□□ 0.67
DNMT3A-213ENST00000484184 CABLES1Q8TDN4 633 aa19.22■□□□□ 0.67
DNMT3A-213ENST00000484184 PIK3C2GO75747 1445 aa19.22■□□□□ 0.67
DNMT3A-213ENST00000484184 ANKRD30BQ9BXX2 1392 aa19.21■□□□□ 0.67
DNMT3A-213ENST00000484184 RGL3Q3MIN7 710 aa19.21■□□□□ 0.67
DNMT3A-213ENST00000484184 TNS3Q68CZ2 1445 aa19.21■□□□□ 0.67
DNMT3A-213ENST00000484184 YTHDC2Q9H6S0 1430 aaKnown RBP19.21■□□□□ 0.67
DNMT3A-213ENST00000484184 PLCH1Q4KWH8 1693 aa19.2■□□□□ 0.66
DNMT3A-213ENST00000484184 NWD2Q9ULI1 1742 aa19.2■□□□□ 0.66
DNMT3A-213ENST00000484184 SIRT1Q96EB6 747 aa19.2■□□□□ 0.66
DNMT3A-213ENST00000484184 LRP5O75197 1615 aa19.2■□□□□ 0.66
DNMT3A-213ENST00000484184 ABCA3Q99758 1704 aa19.19■□□□□ 0.66
DNMT3A-213ENST00000484184 PHF8Q9UPP1 1060 aa19.18■□□□□ 0.66
DNMT3A-213ENST00000484184 SBNO1A3KN83 1393 aa19.17■□□□□ 0.66
DNMT3A-213ENST00000484184 NRXN1Q9ULB1 1477 aa19.16■□□□□ 0.66
DNMT3A-213ENST00000484184 SF3B2Q13435 895 aaKnown RBP19.16■□□□□ 0.66
DNMT3A-213ENST00000484184 KRT27Q7Z3Y8 459 aa19.16■□□□□ 0.66
DNMT3A-213ENST00000484184 FAM83GA6ND36 823 aa19.15■□□□□ 0.66
DNMT3A-213ENST00000484184 C14orf93Q9H972 538 aaKnown RBP19.15■□□□□ 0.66
DNMT3A-213ENST00000484184 PSME1Q06323 249 aa19.14■□□□□ 0.65
DNMT3A-213ENST00000484184 HAP1P54257 671 aaPredicted RBP19.13■□□□□ 0.65
DNMT3A-213ENST00000484184 NRAPQ86VF7 1730 aa19.12■□□□□ 0.65
DNMT3A-213ENST00000484184 ARHGEF10O15013 1369 aa19.12■□□□□ 0.65
DNMT3A-213ENST00000484184 PLEKHG5O94827 1062 aa19.12■□□□□ 0.65
DNMT3A-213ENST00000484184 CCDC9Q9Y3X0 531 aaKnown RBP19.12■□□□□ 0.65
DNMT3A-213ENST00000484184 PSDA5PKW4 1024 aaPredicted RBP19.11■□□□□ 0.65
DNMT3A-213ENST00000484184 HRCP23327 699 aa19.11■□□□□ 0.65
DNMT3A-213ENST00000484184 MPHOSPH9Q99550 1183 aa19.11■□□□□ 0.65
DNMT3A-213ENST00000484184 CFAP70Q5T0N1 1121 aa19.1■□□□□ 0.65
DNMT3A-213ENST00000484184 TRPM3Q9HCF6 1732 aaPredicted RBP19.08■□□□□ 0.65
DNMT3A-213ENST00000484184 BAG6P46379 1132 aa19.08■□□□□ 0.64
DNMT3A-213ENST00000484184 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
DNMT3A-213ENST00000484184 LMOD2Q6P5Q4 547 aa19.08■□□□□ 0.64
DNMT3A-213ENST00000484184 PMFBP1Q8TBY8 1022 aa19.08■□□□□ 0.64
DNMT3A-213ENST00000484184 PRAM1Q96QH2 718 aa19.08■□□□□ 0.64
DNMT3A-213ENST00000484184 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.64
DNMT3A-213ENST00000484184 DHX57Q6P158 1386 aaKnown RBP19.07■□□□□ 0.64
DNMT3A-213ENST00000484184 SAFB2Q14151 953 aaKnown RBP eCLIP19.07■□□□□ 0.64
DNMT3A-213ENST00000484184 ALS2Q96Q42 1657 aa19.06■□□□□ 0.64
DNMT3A-213ENST00000484184 BTG4Q9NY30 223 aa19.06■□□□□ 0.64
DNMT3A-213ENST00000484184 EN1Q05925 392 aaPredicted RBP19.05■□□□□ 0.64
DNMT3A-213ENST00000484184 ADGRB2O60241 1585 aa19.05■□□□□ 0.64
DNMT3A-213ENST00000484184 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
DNMT3A-213ENST00000484184 DISP2A7MBM2 1401 aa19.04■□□□□ 0.64
DNMT3A-213ENST00000484184 FAM182BQ5T319 152 aa19.04■□□□□ 0.64
DNMT3A-213ENST00000484184 COL14A1Q05707 1796 aaKnown RBP19.04■□□□□ 0.64
DNMT3A-213ENST00000484184 SPATA31A5Q5VU36 1347 aa19.03■□□□□ 0.64
DNMT3A-213ENST00000484184 SPATA31A7Q8IWB4 1347 aa19.03■□□□□ 0.64
DNMT3A-213ENST00000484184 RGPD1P0DJD0 1748 aa19.03■□□□□ 0.64
DNMT3A-213ENST00000484184 A0A0G2JS52 829 aa19.03■□□□□ 0.64
DNMT3A-213ENST00000484184 MYT1Q01538 1121 aa19.03■□□□□ 0.64
DNMT3A-213ENST00000484184 THSD7AQ9UPZ6 1657 aa19.03■□□□□ 0.64
DNMT3A-213ENST00000484184 CRYBG1Q9Y4K1 1723 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms