RNA–Protein interactions for RNA: ENST00000483536.6

NOVA1-205, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 1 (best)

Gene NOVA1, Length 6,575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-205ENST00000483536 FLIIQ13045 1269 aa9.36□□□□□ -0.91
NOVA1-205ENST00000483536 VGLL3A8MV65 326 aa9.36□□□□□ -0.91
NOVA1-205ENST00000483536 TIGD1Q96MW7 591 aa9.36□□□□□ -0.91
NOVA1-205ENST00000483536 GSE1Q14687 1217 aa9.36□□□□□ -0.91
NOVA1-205ENST00000483536 STK31Q9BXU1 1019 aa9.35□□□□□ -0.91
NOVA1-205ENST00000483536 TMED8Q6PL24 325 aaPredicted RBP9.35□□□□□ -0.91
NOVA1-205ENST00000483536 PMFBP1Q8TBY8 1022 aa9.35□□□□□ -0.91
NOVA1-205ENST00000483536 ZNF853P0CG23 659 aa9.35□□□□□ -0.91
NOVA1-205ENST00000483536 NBPF9Q3BBW0 867 aa9.35□□□□□ -0.91
NOVA1-205ENST00000483536 FAM114A1Q8IWE2 563 aa9.35□□□□□ -0.91
NOVA1-205ENST00000483536 G3BP2Q9UN86 482 aaKnown RBP9.35□□□□□ -0.91
NOVA1-205ENST00000483536 SATB2Q9UPW6 733 aa9.35□□□□□ -0.91
NOVA1-205ENST00000483536 ZNF280DQ6N043 979 aa9.34□□□□□ -0.91
NOVA1-205ENST00000483536 ARL10Q8N8L6 244 aa9.34□□□□□ -0.91
NOVA1-205ENST00000483536 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.34□□□□□ -0.91
NOVA1-205ENST00000483536 MAGEC2Q9UBF1 373 aaPredicted RBP9.34□□□□□ -0.91
NOVA1-205ENST00000483536 ARIH1Q9Y4X5 557 aaPredicted RBP9.34□□□□□ -0.91
NOVA1-205ENST00000483536 MNAT1P51948 309 aa9.34□□□□□ -0.91
NOVA1-205ENST00000483536 BRPF1P55201 1214 aaPredicted RBP9.34□□□□□ -0.91
NOVA1-205ENST00000483536 MICAL1Q8TDZ2 1067 aa9.34□□□□□ -0.91
NOVA1-205ENST00000483536 CCDC85AQ96PX6 553 aaPredicted RBP9.34□□□□□ -0.91
NOVA1-205ENST00000483536 KCNJ4P48050 445 aa9.34□□□□□ -0.92
NOVA1-205ENST00000483536 MPHOSPH6Q99547 160 aaKnown RBP9.33□□□□□ -0.92
NOVA1-205ENST00000483536 IFT57Q9NWB7 429 aa9.33□□□□□ -0.92
NOVA1-205ENST00000483536 FMNL3Q8IVF7 1028 aa9.33□□□□□ -0.92
NOVA1-205ENST00000483536 GTPBP4Q9BZE4 634 aaKnown RBP9.33□□□□□ -0.92
NOVA1-205ENST00000483536 USP25Q9UHP3 1055 aa9.33□□□□□ -0.92
NOVA1-205ENST00000483536 KIF20AO95235 890 aa9.33□□□□□ -0.92
NOVA1-205ENST00000483536 GRIPAP1Q4V328 841 aa9.33□□□□□ -0.92
NOVA1-205ENST00000483536 CCDC92Q53HC0 331 aaPredicted RBP9.33□□□□□ -0.92
NOVA1-205ENST00000483536 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
NOVA1-205ENST00000483536 JAKMIP3Q5VZ66 844 aa9.32□□□□□ -0.92
NOVA1-205ENST00000483536 ISM2Q6H9L7 571 aa9.32□□□□□ -0.92
NOVA1-205ENST00000483536 RPUSD2Q8IZ73 545 aaKnown RBP9.32□□□□□ -0.92
NOVA1-205ENST00000483536 CENPHQ9H3R5 247 aa9.32□□□□□ -0.92
NOVA1-205ENST00000483536 MYO6Q9UM54 1294 aa9.32□□□□□ -0.92
NOVA1-205ENST00000483536 IKQ13123 557 aaPredicted RBP9.32□□□□□ -0.92
NOVA1-205ENST00000483536 PPP2R5AQ15172 486 aa9.32□□□□□ -0.92
NOVA1-205ENST00000483536 RNF214Q8ND24 703 aa9.32□□□□□ -0.92
NOVA1-205ENST00000483536 NBPF3Q9H094 633 aa9.32□□□□□ -0.92
NOVA1-205ENST00000483536 SMAP1Q8IYB5 467 aaPredicted RBP9.32□□□□□ -0.92
NOVA1-205ENST00000483536 NOC3LQ8WTT2 800 aaKnown RBP9.32□□□□□ -0.92
NOVA1-205ENST00000483536 VIMP08670 466 aaKnown RBP9.31□□□□□ -0.92
NOVA1-205ENST00000483536 CCDC47Q96A33 483 aaKnown RBP9.31□□□□□ -0.92
NOVA1-205ENST00000483536 HDAC9Q9UKV0 1011 aa9.31□□□□□ -0.92
NOVA1-205ENST00000483536 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
NOVA1-205ENST00000483536 NEXNQ0ZGT2 675 aa9.31□□□□□ -0.92
NOVA1-205ENST00000483536 MIER1Q8N108 512 aa9.31□□□□□ -0.92
NOVA1-205ENST00000483536 ARMC9Q7Z3E5 817 aa9.31□□□□□ -0.92
NOVA1-205ENST00000483536 SERPINA10Q9UK55 444 aa9.31□□□□□ -0.92
NOVA1-205ENST00000483536 NBPF20Q3BBV1 942 aa9.31□□□□□ -0.92
NOVA1-205ENST00000483536 TMTC2Q8N394 836 aa9.31□□□□□ -0.92
NOVA1-205ENST00000483536 ZKSCAN2Q63HK3 967 aa9.3□□□□□ -0.92
NOVA1-205ENST00000483536 CCDC73Q6ZRK6 1079 aa9.3□□□□□ -0.92
NOVA1-205ENST00000483536 DNAAF4Q8WXU2 420 aa9.3□□□□□ -0.92
NOVA1-205ENST00000483536 SPINK5Q9NQ38 1064 aaPredicted RBP9.3□□□□□ -0.92
NOVA1-205ENST00000483536 NUCB2P80303 420 aa9.3□□□□□ -0.92
NOVA1-205ENST00000483536 SEPT7Q16181 437 aaKnown RBP9.3□□□□□ -0.92
NOVA1-205ENST00000483536 SLC26A8Q96RN1 970 aa9.3□□□□□ -0.92
NOVA1-205ENST00000483536 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.3□□□□□ -0.92
NOVA1-205ENST00000483536 FEZ2Q9UHY8 353 aaPredicted RBP9.3□□□□□ -0.92
NOVA1-205ENST00000483536 TRIM17Q9Y577 477 aa9.3□□□□□ -0.92
NOVA1-205ENST00000483536 CHCHD4Q8N4Q1 142 aa9.29□□□□□ -0.92
NOVA1-205ENST00000483536 RPGRQ92834 1020 aaKnown RBP9.29□□□□□ -0.92
NOVA1-205ENST00000483536 MFSD4BQ5TF39 518 aa9.29□□□□□ -0.92
NOVA1-205ENST00000483536 KRBA2Q6ZNG9 492 aa9.29□□□□□ -0.92
NOVA1-205ENST00000483536 CTNNBL1Q8WYA6 563 aaPredicted RBP9.29□□□□□ -0.92
NOVA1-205ENST00000483536 MAP2K1Q02750 393 aaPredicted RBP9.29□□□□□ -0.92
NOVA1-205ENST00000483536 GET4Q7L5D6 327 aaPredicted RBP9.29□□□□□ -0.92
NOVA1-205ENST00000483536 ITPRIPQ8IWB1 547 aa9.29□□□□□ -0.92
NOVA1-205ENST00000483536 LRRC43Q8N309 656 aa9.29□□□□□ -0.92
NOVA1-205ENST00000483536 RNF216Q9NWF9 866 aaPredicted RBP9.29□□□□□ -0.92
NOVA1-205ENST00000483536 UBAP1Q9NZ09 502 aa9.29□□□□□ -0.92
NOVA1-205ENST00000483536 SMC3Q9UQE7 1217 aa9.29□□□□□ -0.92
NOVA1-205ENST00000483536 EIF3JO75822 258 aaKnown RBP9.28□□□□□ -0.92
NOVA1-205ENST00000483536 GOLGA6L9A6NEM1 432 aa9.28□□□□□ -0.92
NOVA1-205ENST00000483536 CHMP2AO43633 222 aa9.28□□□□□ -0.92
NOVA1-205ENST00000483536 S100BP04271 92 aaPredicted RBP9.28□□□□□ -0.92
NOVA1-205ENST00000483536 ZNF131P52739 623 aa9.28□□□□□ -0.92
NOVA1-205ENST00000483536 STK3Q13188 491 aa9.28□□□□□ -0.92
NOVA1-205ENST00000483536 CAGE1Q8TC20 777 aa9.28□□□□□ -0.92
NOVA1-205ENST00000483536 R3HCC1Q9Y3T6 440 aaKnown RBP9.28□□□□□ -0.92
NOVA1-205ENST00000483536 GTF2F1P35269 517 aaKnown RBP eCLIP9.28□□□□□ -0.92
NOVA1-205ENST00000483536 MAP2K2P36507 400 aa9.28□□□□□ -0.92
NOVA1-205ENST00000483536 CALR3Q96L12 384 aaKnown RBP9.28□□□□□ -0.92
NOVA1-205ENST00000483536 MSL3Q8N5Y2 521 aaKnown RBP9.28□□□□□ -0.92
NOVA1-205ENST00000483536 ZNF280CQ8ND82 737 aa9.28□□□□□ -0.92
NOVA1-205ENST00000483536 SHTN1A0MZ66 631 aa9.28□□□□□ -0.92
NOVA1-205ENST00000483536 H0YC42 278 aa9.27□□□□□ -0.92
NOVA1-205ENST00000483536 CCDC65Q8IXS2 484 aa9.27□□□□□ -0.92
NOVA1-205ENST00000483536 ZBTB22O15209 634 aa9.27□□□□□ -0.93
NOVA1-205ENST00000483536 SATB1Q01826 763 aa9.27□□□□□ -0.93
NOVA1-205ENST00000483536 RBBP5Q15291 538 aaKnown RBP9.27□□□□□ -0.93
NOVA1-205ENST00000483536 CCDC144CPQ8IYA2 1237 aa9.27□□□□□ -0.93
NOVA1-205ENST00000483536 HDGFL2Q7Z4V5 671 aaPredicted RBP9.27□□□□□ -0.93
NOVA1-205ENST00000483536 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
NOVA1-205ENST00000483536 SEPT8Q92599 483 aa9.27□□□□□ -0.93
NOVA1-205ENST00000483536 PCMTD1Q96MG8 357 aaPredicted RBP9.27□□□□□ -0.93
NOVA1-205ENST00000483536 FAM184BQ9ULE4 1060 aa9.27□□□□□ -0.93
NOVA1-205ENST00000483536 NMIQ13287 307 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms