RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 TRAK1Q9UPV9 953 aa19.3■□□□□ 0.68
SSR1-208ENST00000483409 TRPM1Q7Z4N2 1603 aa19.29■□□□□ 0.68
SSR1-208ENST00000483409 SAFB2Q14151 953 aaKnown RBP eCLIP19.29■□□□□ 0.68
SSR1-208ENST00000483409 PRAM1Q96QH2 718 aa19.29■□□□□ 0.68
SSR1-208ENST00000483409 SIRT1Q96EB6 747 aa19.28■□□□□ 0.68
SSR1-208ENST00000483409 TONSLQ96HA7 1378 aa19.28■□□□□ 0.68
SSR1-208ENST00000483409 FMN2Q9NZ56 1722 aa19.27■□□□□ 0.68
SSR1-208ENST00000483409 NBPF1Q3BBV0 1214 aa19.26■□□□□ 0.67
SSR1-208ENST00000483409 BRINP3Q76B58 766 aa19.26■□□□□ 0.67
SSR1-208ENST00000483409 POGKQ9P215 609 aa19.26■□□□□ 0.67
SSR1-208ENST00000483409 C1orf167Q5SNV9 1468 aa19.26■□□□□ 0.67
SSR1-208ENST00000483409 AHDC1Q5TGY3 1603 aaPredicted RBP19.25■□□□□ 0.67
SSR1-208ENST00000483409 RGPD8O14715 1765 aaPredicted RBP19.24■□□□□ 0.67
SSR1-208ENST00000483409 COL16A1Q07092 1604 aaPredicted RBP19.24■□□□□ 0.67
SSR1-208ENST00000483409 NHSL1Q5SYE7 1610 aa19.24■□□□□ 0.67
SSR1-208ENST00000483409 NUTM2FA1L443 756 aa19.22■□□□□ 0.67
SSR1-208ENST00000483409 ADGRB2O60241 1585 aa19.22■□□□□ 0.67
SSR1-208ENST00000483409 NBPF8Q3BBV2 869 aa19.21■□□□□ 0.67
SSR1-208ENST00000483409 MINK1Q8N4C8 1332 aaPredicted RBP19.2■□□□□ 0.66
SSR1-208ENST00000483409 ORAI2Q96SN7 254 aa19.19■□□□□ 0.66
SSR1-208ENST00000483409 HIRIP3Q9BW71 556 aaPredicted RBP19.19■□□□□ 0.66
SSR1-208ENST00000483409 ROCK2O75116 1388 aaKnown RBP19.19■□□□□ 0.66
SSR1-208ENST00000483409 DDX17Q92841 729 aaKnown RBP19.18■□□□□ 0.66
SSR1-208ENST00000483409 QRICH2Q9H0J4 1663 aa19.17■□□□□ 0.66
SSR1-208ENST00000483409 ESCO1Q5FWF5 840 aa19.17■□□□□ 0.66
SSR1-208ENST00000483409 MED1Q15648 1581 aaPredicted RBP19.17■□□□□ 0.66
SSR1-208ENST00000483409 CLSPNQ9HAW4 1339 aa19.17■□□□□ 0.66
SSR1-208ENST00000483409 USP32Q8NFA0 1604 aa19.17■□□□□ 0.66
SSR1-208ENST00000483409 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
SSR1-208ENST00000483409 KIF1AQ12756 1690 aa19.14■□□□□ 0.66
SSR1-208ENST00000483409 RALGAPBQ86X10 1494 aa19.14■□□□□ 0.65
SSR1-208ENST00000483409 SHPRHQ149N8 1683 aa19.14■□□□□ 0.65
SSR1-208ENST00000483409 JCADQ9P266 1359 aa19.13■□□□□ 0.65
SSR1-208ENST00000483409 CENPJQ9HC77 1338 aaPredicted RBP19.12■□□□□ 0.65
SSR1-208ENST00000483409 TULP4Q9NRJ4 1543 aa19.11■□□□□ 0.65
SSR1-208ENST00000483409 GPRASP1Q5JY77 1395 aa19.11■□□□□ 0.65
SSR1-208ENST00000483409 WASLO00401 505 aaPredicted RBP19.11■□□□□ 0.65
SSR1-208ENST00000483409 ANKARQ7Z5J8 1434 aa19.1■□□□□ 0.65
SSR1-208ENST00000483409 DISP3Q9P2K9 1392 aa19.1■□□□□ 0.65
SSR1-208ENST00000483409 ITSN1Q15811 1721 aa19.1■□□□□ 0.65
SSR1-208ENST00000483409 EIF3AQ14152 1382 aaKnown RBP19.09■□□□□ 0.65
SSR1-208ENST00000483409 NPHP3Q7Z494 1330 aa19.08■□□□□ 0.65
SSR1-208ENST00000483409 PRR36Q9H6K5 1346 aa19.08■□□□□ 0.65
SSR1-208ENST00000483409 FOXO3O43524 673 aa19.08■□□□□ 0.64
SSR1-208ENST00000483409 CARD11Q9BXL7 1154 aa19.08■□□□□ 0.64
SSR1-208ENST00000483409 SOS2Q07890 1332 aaPredicted RBP19.07■□□□□ 0.64
SSR1-208ENST00000483409 XPCQ01831 940 aaPredicted RBP19.07■□□□□ 0.64
SSR1-208ENST00000483409 PHF8Q9UPP1 1060 aa19.07■□□□□ 0.64
SSR1-208ENST00000483409 PXDNQ92626 1479 aa19.07■□□□□ 0.64
SSR1-208ENST00000483409 ATP7BP35670 1465 aa19.06■□□□□ 0.64
SSR1-208ENST00000483409 LRRC59Q96AG4 307 aaKnown RBP19.06■□□□□ 0.64
SSR1-208ENST00000483409 TOPAZ1Q8N9V7 1692 aa19.05■□□□□ 0.64
SSR1-208ENST00000483409 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
SSR1-208ENST00000483409 PMFBP1Q8TBY8 1022 aa19.04■□□□□ 0.64
SSR1-208ENST00000483409 PNPLA6Q8IY17 1366 aa19.04■□□□□ 0.64
SSR1-208ENST00000483409 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
SSR1-208ENST00000483409 LRP6O75581 1613 aa19.03■□□□□ 0.64
SSR1-208ENST00000483409 NUDT16Q96DE0 195 aaKnown RBP19.02■□□□□ 0.64
SSR1-208ENST00000483409 SPATA31A6Q5VVP1 1343 aa19.01■□□□□ 0.63
SSR1-208ENST00000483409 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
SSR1-208ENST00000483409 NUTM2BA6NNL0 878 aaPredicted RBP19■□□□□ 0.63
SSR1-208ENST00000483409 NUTM2EB1AL46 878 aaPredicted RBP19■□□□□ 0.63
SSR1-208ENST00000483409 SRPK2P78362 688 aaKnown RBP19■□□□□ 0.63
SSR1-208ENST00000483409 KRT28Q7Z3Y7 464 aa19■□□□□ 0.63
SSR1-208ENST00000483409 NUTM2AQ8IVF1 878 aaPredicted RBP19■□□□□ 0.63
SSR1-208ENST00000483409 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
SSR1-208ENST00000483409 CABP2Q9NPB3 220 aa18.99■□□□□ 0.63
SSR1-208ENST00000483409 TRPM3Q9HCF6 1732 aaPredicted RBP18.99■□□□□ 0.63
SSR1-208ENST00000483409 PSME1Q06323 249 aa18.98■□□□□ 0.63
SSR1-208ENST00000483409 EVC2Q86UK5 1308 aa18.98■□□□□ 0.63
SSR1-208ENST00000483409 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
SSR1-208ENST00000483409 MEX3CQ5U5Q3 659 aaKnown RBP18.96■□□□□ 0.63
SSR1-208ENST00000483409 CCDC61Q9Y6R9 512 aa18.96■□□□□ 0.63
SSR1-208ENST00000483409 TNS3Q68CZ2 1445 aa18.96■□□□□ 0.63
SSR1-208ENST00000483409 PPIP5K1Q6PFW1 1433 aa18.95■□□□□ 0.62
SSR1-208ENST00000483409 SPATA31A3Q5VYP0 1347 aa18.95■□□□□ 0.62
SSR1-208ENST00000483409 SBNO2Q9Y2G9 1366 aa18.94■□□□□ 0.62
SSR1-208ENST00000483409 ALS2Q96Q42 1657 aa18.94■□□□□ 0.62
SSR1-208ENST00000483409 SBNO1A3KN83 1393 aa18.93■□□□□ 0.62
SSR1-208ENST00000483409 MARF1Q9Y4F3 1742 aaKnown RBP18.93■□□□□ 0.62
SSR1-208ENST00000483409 USP47Q96K76 1375 aa18.93■□□□□ 0.62
SSR1-208ENST00000483409 ABCA3Q99758 1704 aa18.92■□□□□ 0.62
SSR1-208ENST00000483409 ST20-MTHFSA0A0A6YYL1 179 aa18.92■□□□□ 0.62
SSR1-208ENST00000483409 LMOD2Q6P5Q4 547 aa18.92■□□□□ 0.62
SSR1-208ENST00000483409 ACEP12821 1306 aa18.92■□□□□ 0.62
SSR1-208ENST00000483409 POLR3AO14802 1390 aaPredicted RBP18.92■□□□□ 0.62
SSR1-208ENST00000483409 PLEKHG3A1L390 1219 aa18.9■□□□□ 0.62
SSR1-208ENST00000483409 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
SSR1-208ENST00000483409 ADAMTS2O95450 1211 aa18.9■□□□□ 0.62
SSR1-208ENST00000483409 RGS17Q9UGC6 210 aaPredicted RBP18.9■□□□□ 0.62
SSR1-208ENST00000483409 AKAP12Q02952 1782 aa18.89■□□□□ 0.61
SSR1-208ENST00000483409 CABP1Q9NZU7 370 aa18.89■□□□□ 0.61
SSR1-208ENST00000483409 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
SSR1-208ENST00000483409 PAK3O75914 559 aaPredicted RBP18.88■□□□□ 0.61
SSR1-208ENST00000483409 ILDR2Q71H61 639 aa18.88■□□□□ 0.61
SSR1-208ENST00000483409 TESK2Q96S53 571 aa18.88■□□□□ 0.61
SSR1-208ENST00000483409 ATAD2Q6PL18 1390 aa18.88■□□□□ 0.61
SSR1-208ENST00000483409 C8orf37Q96NL8 207 aa18.87■□□□□ 0.61
SSR1-208ENST00000483409 CRYBG1Q9Y4K1 1723 aa18.86■□□□□ 0.61
SSR1-208ENST00000483409 CABLES1Q8TDN4 633 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms