RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 MST1RQ04912 1400 aa13.9□□□□□ -0.18
APTX-226ENST00000483148 PNPLA6Q8IY17 1366 aa13.89□□□□□ -0.19
APTX-226ENST00000483148 ADAMTS2O95450 1211 aa13.88□□□□□ -0.19
APTX-226ENST00000483148 TRPM2O94759 1503 aa13.88□□□□□ -0.19
APTX-226ENST00000483148 NGLY1Q96IV0 654 aa13.88□□□□□ -0.19
APTX-226ENST00000483148 TIMELESSQ9UNS1 1208 aa13.88□□□□□ -0.19
APTX-226ENST00000483148 DCCP43146 1447 aa13.88□□□□□ -0.19
APTX-226ENST00000483148 NHSL1Q5SYE7 1610 aa13.87□□□□□ -0.19
APTX-226ENST00000483148 METP08581 1390 aa13.87□□□□□ -0.19
APTX-226ENST00000483148 E9PCH4 1651 aa13.87□□□□□ -0.19
APTX-226ENST00000483148 ANP32CO43423 234 aa13.85□□□□□ -0.19
APTX-226ENST00000483148 XRN1Q8IZH2 1706 aaKnown RBP13.84□□□□□ -0.19
APTX-226ENST00000483148 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
APTX-226ENST00000483148 MPHOSPH9Q99550 1183 aa13.83□□□□□ -0.19
APTX-226ENST00000483148 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.19
APTX-226ENST00000483148 USP21Q9UK80 565 aa13.83□□□□□ -0.2
APTX-226ENST00000483148 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
APTX-226ENST00000483148 ORAI2Q96SN7 254 aa13.82□□□□□ -0.2
APTX-226ENST00000483148 DDX10Q13206 875 aaKnown RBP13.81□□□□□ -0.2
APTX-226ENST00000483148 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
APTX-226ENST00000483148 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
APTX-226ENST00000483148 FNBP4Q8N3X1 1017 aaPredicted RBP13.81□□□□□ -0.2
APTX-226ENST00000483148 ADGRL3Q9HAR2 1447 aa13.81□□□□□ -0.2
APTX-226ENST00000483148 TRPC5Q9UL62 973 aaPredicted RBP13.8□□□□□ -0.2
APTX-226ENST00000483148 SETBP1Q9Y6X0 1596 aa13.8□□□□□ -0.2
APTX-226ENST00000483148 C1orf167Q5SNV9 1468 aa13.8□□□□□ -0.2
APTX-226ENST00000483148 SOS2Q07890 1332 aaPredicted RBP13.8□□□□□ -0.2
APTX-226ENST00000483148 ZNF326Q5BKZ1 582 aaKnown RBP13.79□□□□□ -0.2
APTX-226ENST00000483148 PPP4R2Q9NY27 417 aa13.79□□□□□ -0.2
APTX-226ENST00000483148 NOP58Q9Y2X3 529 aaKnown RBP13.78□□□□□ -0.2
APTX-226ENST00000483148 ATRNO75882 1429 aa13.77□□□□□ -0.2
APTX-226ENST00000483148 SPHKAPQ2M3C7 1700 aa13.77□□□□□ -0.2
APTX-226ENST00000483148 NALCNQ8IZF0 1738 aa13.77□□□□□ -0.21
APTX-226ENST00000483148 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
APTX-226ENST00000483148 ROBO2Q9HCK4 1378 aa13.74□□□□□ -0.21
APTX-226ENST00000483148 PTCH1Q13635 1447 aa13.74□□□□□ -0.21
APTX-226ENST00000483148 LAMC1P11047 1609 aa13.74□□□□□ -0.21
APTX-226ENST00000483148 BCL9LQ86UU0 1499 aa13.73□□□□□ -0.21
APTX-226ENST00000483148 ANKRD30BQ9BXX2 1392 aa13.73□□□□□ -0.21
APTX-226ENST00000483148 CCDC125Q86Z20 511 aa13.73□□□□□ -0.21
APTX-226ENST00000483148 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.21
APTX-226ENST00000483148 CLTCL1P53675 1640 aa13.71□□□□□ -0.22
APTX-226ENST00000483148 XPCQ01831 940 aaPredicted RBP13.71□□□□□ -0.22
APTX-226ENST00000483148 NEXMIFQ5QGS0 1516 aa13.7□□□□□ -0.22
APTX-226ENST00000483148 MYOM2P54296 1465 aa13.7□□□□□ -0.22
APTX-226ENST00000483148 RTL5Q5HYW3 569 aaPredicted RBP13.69□□□□□ -0.22
APTX-226ENST00000483148 DEFB132Q7Z7B7 95 aa13.69□□□□□ -0.22
APTX-226ENST00000483148 UBE2Q2Q8WVN8 375 aa13.69□□□□□ -0.22
APTX-226ENST00000483148 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
APTX-226ENST00000483148 ESCO1Q5FWF5 840 aa13.68□□□□□ -0.22
APTX-226ENST00000483148 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
APTX-226ENST00000483148 FOXO3O43524 673 aa13.68□□□□□ -0.22
APTX-226ENST00000483148 EP400Q96L91 3159 aa13.66□□□□□ -0.22
APTX-226ENST00000483148 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
APTX-226ENST00000483148 PXDNQ92626 1479 aa13.65□□□□□ -0.22
APTX-226ENST00000483148 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
APTX-226ENST00000483148 VGFO15240 615 aaPredicted RBP13.65□□□□□ -0.22
APTX-226ENST00000483148 UNC5CLQ8IV45 518 aa13.65□□□□□ -0.22
APTX-226ENST00000483148 KIF1BO60333 1816 aa13.64□□□□□ -0.23
APTX-226ENST00000483148 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
APTX-226ENST00000483148 BLMP54132 1417 aaPredicted RBP13.64□□□□□ -0.23
APTX-226ENST00000483148 RALGAPBQ86X10 1494 aa13.64□□□□□ -0.23
APTX-226ENST00000483148 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
APTX-226ENST00000483148 SPATA31E1Q6ZUB1 1445 aa13.63□□□□□ -0.23
APTX-226ENST00000483148 GLI3P10071 1580 aa13.63□□□□□ -0.23
APTX-226ENST00000483148 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
APTX-226ENST00000483148 NBR1Q14596 966 aa13.62□□□□□ -0.23
APTX-226ENST00000483148 SEPT12Q8IYM1 358 aa13.62□□□□□ -0.23
APTX-226ENST00000483148 IPO9Q96P70 1041 aaKnown RBP13.62□□□□□ -0.23
APTX-226ENST00000483148 PRAG1Q86YV5 1406 aa13.62□□□□□ -0.23
APTX-226ENST00000483148 SLIT2O94813 1529 aa13.61□□□□□ -0.23
APTX-226ENST00000483148 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
APTX-226ENST00000483148 WAPLQ7Z5K2 1190 aa13.61□□□□□ -0.23
APTX-226ENST00000483148 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
APTX-226ENST00000483148 SIN3AQ96ST3 1273 aa13.6□□□□□ -0.23
APTX-226ENST00000483148 PSDA5PKW4 1024 aaPredicted RBP13.59□□□□□ -0.23
APTX-226ENST00000483148 ADRA2BP18089 450 aa13.59□□□□□ -0.23
APTX-226ENST00000483148 STK26Q9P289 416 aa13.59□□□□□ -0.23
APTX-226ENST00000483148 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
APTX-226ENST00000483148 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
APTX-226ENST00000483148 WASHC2AQ641Q2 1341 aa13.59□□□□□ -0.23
APTX-226ENST00000483148 C11orf95C9JLR9 678 aaPredicted RBP13.58□□□□□ -0.23
APTX-226ENST00000483148 ONECUT3O60422 494 aaPredicted RBP13.58□□□□□ -0.23
APTX-226ENST00000483148 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.23
APTX-226ENST00000483148 RPGRIP1LQ68CZ1 1315 aa13.58□□□□□ -0.24
APTX-226ENST00000483148 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
APTX-226ENST00000483148 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
APTX-226ENST00000483148 CABLES1Q8TDN4 633 aa13.58□□□□□ -0.24
APTX-226ENST00000483148 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.24
APTX-226ENST00000483148 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
APTX-226ENST00000483148 IRX6P78412 446 aaPredicted RBP13.57□□□□□ -0.24
APTX-226ENST00000483148 KRT28Q7Z3Y7 464 aa13.57□□□□□ -0.24
APTX-226ENST00000483148 CDC42BPGQ6DT37 1551 aa13.57□□□□□ -0.24
APTX-226ENST00000483148 VPS72Q15906 364 aa13.56□□□□□ -0.24
APTX-226ENST00000483148 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
APTX-226ENST00000483148 LRPPRCP42704 1394 aaKnown RBP13.56□□□□□ -0.24
APTX-226ENST00000483148 PLEKHH1Q9ULM0 1364 aa13.56□□□□□ -0.24
APTX-226ENST00000483148 KRT27Q7Z3Y8 459 aa13.55□□□□□ -0.24
APTX-226ENST00000483148 IFT172Q9UG01 1749 aa13.55□□□□□ -0.24
APTX-226ENST00000483148 PPLO60437 1756 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms