RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 C22orf23Q9BZE7 217 aa14.95□□□□□ -0.02
VTI1A-205ENST00000483122 CCDC144AA2RUR9 1427 aa14.95□□□□□ -0.02
VTI1A-205ENST00000483122 SCAPERQ9BY12 1400 aa14.95□□□□□ -0.02
VTI1A-205ENST00000483122 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
VTI1A-205ENST00000483122 ISY1Q9ULR0 285 aaKnown RBP14.95□□□□□ -0.02
VTI1A-205ENST00000483122 MFAP1P55081 439 aaKnown RBP14.94□□□□□ -0.02
VTI1A-205ENST00000483122 RICTORQ6R327 1708 aa14.94□□□□□ -0.02
VTI1A-205ENST00000483122 NINLQ9Y2I6 1382 aa14.94□□□□□ -0.02
VTI1A-205ENST00000483122 PRDM4Q9UKN5 801 aa14.94□□□□□ -0.02
VTI1A-205ENST00000483122 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
VTI1A-205ENST00000483122 ZMYM3Q14202 1370 aa14.93□□□□□ -0.02
VTI1A-205ENST00000483122 PIK3C2GO75747 1445 aa14.93□□□□□ -0.02
VTI1A-205ENST00000483122 RLBP1P12271 317 aa14.93□□□□□ -0.02
VTI1A-205ENST00000483122 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
VTI1A-205ENST00000483122 POGZQ7Z3K3 1410 aa14.93□□□□□ -0.02
VTI1A-205ENST00000483122 ZNF518AQ6AHZ1 1483 aa14.93□□□□□ -0.02
VTI1A-205ENST00000483122 CCDC141Q6ZP82 1450 aa14.93□□□□□ -0.02
VTI1A-205ENST00000483122 RBM10P98175 930 aaKnown RBP14.92□□□□□ -0.02
VTI1A-205ENST00000483122 FAM135AQ9P2D6 1515 aa14.92□□□□□ -0.02
VTI1A-205ENST00000483122 HNRNPMP52272 730 aaKnown RBP eCLIP14.91□□□□□ -0.02
VTI1A-205ENST00000483122 SHANK2Q9UPX8 1470 aa14.91□□□□□ -0.02
VTI1A-205ENST00000483122 RIPK4P57078 832 aa14.91□□□□□ -0.02
VTI1A-205ENST00000483122 PLXNC1O60486 1568 aa14.9□□□□□ -0.02
VTI1A-205ENST00000483122 FRMPD1Q5SYB0 1578 aa14.9□□□□□ -0.02
VTI1A-205ENST00000483122 HSCBQ8IWL3 235 aa14.9□□□□□ -0.02
VTI1A-205ENST00000483122 TNPO1Q92973 898 aaKnown RBP14.9□□□□□ -0.02
VTI1A-205ENST00000483122 TRAPPC8Q9Y2L5 1435 aa14.9□□□□□ -0.02
VTI1A-205ENST00000483122 PLA2R1Q13018 1463 aa14.9□□□□□ -0.02
VTI1A-205ENST00000483122 DDIT3P35638 169 aa14.9□□□□□ -0.02
VTI1A-205ENST00000483122 ASXL1Q8IXJ9 1541 aa14.89□□□□□ -0.03
VTI1A-205ENST00000483122 TSPY4P0CV99 314 aa14.88□□□□□ -0.03
VTI1A-205ENST00000483122 TSPY10P0CW01 314 aa14.88□□□□□ -0.03
VTI1A-205ENST00000483122 MAST1Q9Y2H9 1570 aa14.88□□□□□ -0.03
VTI1A-205ENST00000483122 NCOA3Q9Y6Q9 1424 aa14.88□□□□□ -0.03
VTI1A-205ENST00000483122 RARSP54136 660 aaKnown RBP14.88□□□□□ -0.03
VTI1A-205ENST00000483122 OFD1O75665 1012 aa14.87□□□□□ -0.03
VTI1A-205ENST00000483122 WWC1Q8IX03 1113 aa14.87□□□□□ -0.03
VTI1A-205ENST00000483122 BCL2L13Q9BXK5 485 aa14.87□□□□□ -0.03
VTI1A-205ENST00000483122 RWDD1Q9H446 243 aaPredicted RBP14.87□□□□□ -0.03
VTI1A-205ENST00000483122 EIF2AK4Q9P2K8 1649 aaKnown RBP14.87□□□□□ -0.03
VTI1A-205ENST00000483122 HECW2Q9P2P5 1572 aa14.87□□□□□ -0.03
VTI1A-205ENST00000483122 ZSCAN30Q86W11 494 aa14.86□□□□□ -0.03
VTI1A-205ENST00000483122 INO80Q9ULG1 1556 aaPredicted RBP14.86□□□□□ -0.03
VTI1A-205ENST00000483122 CCDC173Q0VFZ6 552 aa14.86□□□□□ -0.03
VTI1A-205ENST00000483122 PPP1R9BQ96SB3 815 aa14.86□□□□□ -0.03
VTI1A-205ENST00000483122 AFAP1Q8N556 730 aa14.85□□□□□ -0.03
VTI1A-205ENST00000483122 MLH3Q9UHC1 1453 aa14.85□□□□□ -0.03
VTI1A-205ENST00000483122 RAPGEF3O95398 923 aa14.85□□□□□ -0.03
VTI1A-205ENST00000483122 SYNMO15061 1565 aa14.85□□□□□ -0.03
VTI1A-205ENST00000483122 ZFYVE16Q7Z3T8 1539 aa14.84□□□□□ -0.03
VTI1A-205ENST00000483122 ATP7AQ04656 1500 aa14.84□□□□□ -0.03
VTI1A-205ENST00000483122 RNF17Q9BXT8 1623 aaKnown RBP14.84□□□□□ -0.03
VTI1A-205ENST00000483122 AAMPQ13685 434 aa14.84□□□□□ -0.03
VTI1A-205ENST00000483122 FAM13BQ9NYF5 915 aa14.84□□□□□ -0.03
VTI1A-205ENST00000483122 SPAG9O60271 1321 aaKnown RBP14.83□□□□□ -0.03
VTI1A-205ENST00000483122 NASPP49321 788 aaPredicted RBP14.83□□□□□ -0.04
VTI1A-205ENST00000483122 NEUROD2Q15784 382 aa14.83□□□□□ -0.04
VTI1A-205ENST00000483122 GBP4Q96PP9 640 aa14.83□□□□□ -0.04
VTI1A-205ENST00000483122 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.04
VTI1A-205ENST00000483122 RAB3GAP1Q15042 981 aa14.83□□□□□ -0.04
VTI1A-205ENST00000483122 SKOR2Q2VWA4 1001 aaPredicted RBP14.83□□□□□ -0.04
VTI1A-205ENST00000483122 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.83□□□□□ -0.04
VTI1A-205ENST00000483122 R3HCC1Q9Y3T6 440 aaKnown RBP14.83□□□□□ -0.04
VTI1A-205ENST00000483122 SMC5Q8IY18 1101 aa14.82□□□□□ -0.04
VTI1A-205ENST00000483122 RRP7AQ9Y3A4 280 aaKnown RBP14.82□□□□□ -0.04
VTI1A-205ENST00000483122 MSNP26038 577 aaKnown RBP14.82□□□□□ -0.04
VTI1A-205ENST00000483122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.043e-8■■■■□ 22
VTI1A-205ENST00000483122 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
VTI1A-205ENST00000483122 MYOM1P52179 1685 aa14.82□□□□□ -0.04
VTI1A-205ENST00000483122 NGEFQ8N5V2 710 aa14.81□□□□□ -0.04
VTI1A-205ENST00000483122 NPC1L1Q9UHC9 1359 aa14.8□□□□□ -0.04
VTI1A-205ENST00000483122 HSP90AB1P08238 724 aaKnown RBP14.8□□□□□ -0.04
VTI1A-205ENST00000483122 SNX21Q969T3 373 aa14.8□□□□□ -0.04
VTI1A-205ENST00000483122 CIZ1Q9ULV3 898 aaPredicted RBP14.8□□□□□ -0.04
VTI1A-205ENST00000483122 TERF1P54274 439 aa14.8□□□□□ -0.04
VTI1A-205ENST00000483122 ABCA6Q8N139 1617 aa14.79□□□□□ -0.04
VTI1A-205ENST00000483122 ARHGEF40Q8TER5 1519 aa14.79□□□□□ -0.04
VTI1A-205ENST00000483122 A0A0U1RQG5 324 aaPredicted RBP14.79□□□□□ -0.04
VTI1A-205ENST00000483122 ARID3AQ99856 593 aa14.79□□□□□ -0.04
VTI1A-205ENST00000483122 IQGAP1P46940 1657 aa14.79□□□□□ -0.04
VTI1A-205ENST00000483122 MVPQ14764 893 aaKnown RBP14.78□□□□□ -0.04
VTI1A-205ENST00000483122 DIP2CQ9Y2E4 1556 aa14.78□□□□□ -0.04
VTI1A-205ENST00000483122 RBM25P49756 843 aaKnown RBP14.78□□□□□ -0.04
VTI1A-205ENST00000483122 MAP7D2Q96T17 732 aa14.77□□□□□ -0.04
VTI1A-205ENST00000483122 CD2BP2O95400 341 aaKnown RBP14.77□□□□□ -0.05
VTI1A-205ENST00000483122 SSFA2P28290 1259 aa14.77□□□□□ -0.05
VTI1A-205ENST00000483122 CDCA8Q53HL2 280 aa14.77□□□□□ -0.05
VTI1A-205ENST00000483122 UQCRHLA0A096LP55 91 aa14.76□□□□□ -0.05
VTI1A-205ENST00000483122 UQCRHP07919 91 aa14.76□□□□□ -0.05
VTI1A-205ENST00000483122 ANP32BQ92688 251 aaKnown RBP14.76□□□□□ -0.05
VTI1A-205ENST00000483122 PTMSP20962 102 aa14.76□□□□□ -0.05
VTI1A-205ENST00000483122 XPCQ01831 940 aaPredicted RBP14.76□□□□□ -0.05
VTI1A-205ENST00000483122 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.76□□□□□ -0.05
VTI1A-205ENST00000483122 YEATS2Q9ULM3 1422 aa14.76□□□□□ -0.05
VTI1A-205ENST00000483122 REREQ9P2R6 1566 aa14.75□□□□□ -0.05
VTI1A-205ENST00000483122 DUOX2Q9NRD8 1548 aa14.75□□□□□ -0.05
VTI1A-205ENST00000483122 DDX49Q9Y6V7 483 aaKnown RBP14.74□□□□□ -0.05
VTI1A-205ENST00000483122 UNC13BO14795 1591 aa14.74□□□□□ -0.05
VTI1A-205ENST00000483122 SMAP1Q8IYB5 467 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-205ENST00000483122 TCP11L2Q8N4U5 519 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms