RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 REPIN1Q9BWE0 567 aaKnown RBP7.41□□□□□ -1.22
R3HDM1-216ENST00000483065 SMARCA5O60264 1052 aaPredicted RBP7.4□□□□□ -1.22
R3HDM1-216ENST00000483065 ZNF326Q5BKZ1 582 aaKnown RBP7.4□□□□□ -1.22
R3HDM1-216ENST00000483065 MS4A4AQ96JQ5 239 aa7.4□□□□□ -1.22
R3HDM1-216ENST00000483065 PPP1R12CQ9BZL4 782 aa7.4□□□□□ -1.22
R3HDM1-216ENST00000483065 POM121CA8CG34 1229 aa7.39□□□□□ -1.23
R3HDM1-216ENST00000483065 WIPF1O43516 503 aa7.39□□□□□ -1.23
R3HDM1-216ENST00000483065 CFAP70Q5T0N1 1121 aa7.39□□□□□ -1.23
R3HDM1-216ENST00000483065 MTMR14Q8NCE2 650 aa7.39□□□□□ -1.23
R3HDM1-216ENST00000483065 BCL2L13Q9BXK5 485 aa7.39□□□□□ -1.23
R3HDM1-216ENST00000483065 TUSC1Q2TAM9 212 aa7.38□□□□□ -1.23
R3HDM1-216ENST00000483065 WNT2BQ93097 391 aa7.38□□□□□ -1.23
R3HDM1-216ENST00000483065 FAM217BQ9NTX9 383 aaPredicted RBP7.38□□□□□ -1.23
R3HDM1-216ENST00000483065 VPS9D1Q9Y2B5 631 aa7.38□□□□□ -1.23
R3HDM1-216ENST00000483065 NDUFB9Q9Y6M9 179 aa7.38□□□□□ -1.23
R3HDM1-216ENST00000483065 SOX11P35716 441 aa7.37□□□□□ -1.23
R3HDM1-216ENST00000483065 SRPK2P78362 688 aaKnown RBP7.37□□□□□ -1.23
R3HDM1-216ENST00000483065 FOXK1P85037 733 aa7.37□□□□□ -1.23
R3HDM1-216ENST00000483065 CWC22Q9HCG8 908 aaKnown RBP7.37□□□□□ -1.23
R3HDM1-216ENST00000483065 KIAA1522Q9P206 1035 aaPredicted RBP7.37□□□□□ -1.23
R3HDM1-216ENST00000483065 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
R3HDM1-216ENST00000483065 VAMP1P23763 118 aa7.36□□□□□ -1.23
R3HDM1-216ENST00000483065 DSG2Q14126 1118 aa7.36□□□□□ -1.23
R3HDM1-216ENST00000483065 TXNDC2Q86VQ3 553 aa7.36□□□□□ -1.23
R3HDM1-216ENST00000483065 ANKRD62A6NC57 917 aa7.35□□□□□ -1.23
R3HDM1-216ENST00000483065 TMEM88BA6NKF7 163 aa7.35□□□□□ -1.23
R3HDM1-216ENST00000483065 OATP04181 439 aa7.35□□□□□ -1.23
R3HDM1-216ENST00000483065 ZNF16P17020 682 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-216ENST00000483065 LMOD1P29536 600 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-216ENST00000483065 FAM9AQ8IZU1 332 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-216ENST00000483065 TBC1D2BQ9UPU7 963 aa7.35□□□□□ -1.23
R3HDM1-216ENST00000483065 PCDHGA4Q9Y5G9 962 aa7.35□□□□□ -1.23
R3HDM1-216ENST00000483065 CADPSQ9ULU8 1353 aa7.34□□□□□ -1.23
R3HDM1-216ENST00000483065 ARID4AP29374 1257 aaPredicted RBP7.34□□□□□ -1.23
R3HDM1-216ENST00000483065 PSMD1Q99460 953 aa7.34□□□□□ -1.23
R3HDM1-216ENST00000483065 TBC1D2Q9BYX2 928 aa7.34□□□□□ -1.23
R3HDM1-216ENST00000483065 PRKD2Q9BZL6 878 aa7.34□□□□□ -1.23
R3HDM1-216ENST00000483065 PALM3A6NDB9 673 aaPredicted RBP7.33□□□□□ -1.24
R3HDM1-216ENST00000483065 WFS1O76024 890 aa7.33□□□□□ -1.24
R3HDM1-216ENST00000483065 KCNC4Q03721 635 aa7.33□□□□□ -1.24
R3HDM1-216ENST00000483065 PDZRN3Q9UPQ7 1066 aa7.33□□□□□ -1.24
R3HDM1-216ENST00000483065 BHMG1C9JSJ3 638 aaPredicted RBP7.32□□□□□ -1.24
R3HDM1-216ENST00000483065 RIC3Q7Z5B4 369 aa7.32□□□□□ -1.24
R3HDM1-216ENST00000483065 GIPC2Q8TF65 315 aa7.32□□□□□ -1.24
R3HDM1-216ENST00000483065 GOLGA8CPA6NN73 597 aa7.31□□□□□ -1.24
R3HDM1-216ENST00000483065 DNAJC14Q6Y2X3 702 aaPredicted RBP7.31□□□□□ -1.24
R3HDM1-216ENST00000483065 DHX37Q8IY37 1157 aaKnown RBP7.31□□□□□ -1.24
R3HDM1-216ENST00000483065 HIRIP3Q9BW71 556 aaPredicted RBP7.31□□□□□ -1.24
R3HDM1-216ENST00000483065 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
R3HDM1-216ENST00000483065 PPP1R1BQ9UD71 204 aaPredicted RBP7.31□□□□□ -1.24
R3HDM1-216ENST00000483065 AP1G2O75843 785 aa7.3□□□□□ -1.24
R3HDM1-216ENST00000483065 CC2D2BQ6DHV5 1058 aa7.3□□□□□ -1.24
R3HDM1-216ENST00000483065 PLPP6Q8IY26 295 aa7.3□□□□□ -1.24
R3HDM1-216ENST00000483065 DDX12PQ92771 950 aa7.3□□□□□ -1.24
R3HDM1-216ENST00000483065 GJA5P36382 358 aa7.29□□□□□ -1.24
R3HDM1-216ENST00000483065 ITGAEP38570 1179 aa7.29□□□□□ -1.24
R3HDM1-216ENST00000483065 MARSP56192 900 aaKnown RBP7.29□□□□□ -1.24
R3HDM1-216ENST00000483065 ELOAQ14241 798 aaKnown RBP7.29□□□□□ -1.24
R3HDM1-216ENST00000483065 NAALADL2Q58DX5 795 aa7.29□□□□□ -1.24
R3HDM1-216ENST00000483065 NOL8Q76FK4 1167 aaKnown RBP7.29□□□□□ -1.24
R3HDM1-216ENST00000483065 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
R3HDM1-216ENST00000483065 PNMA1Q8ND90 353 aa7.28□□□□□ -1.24
R3HDM1-216ENST00000483065 UBE2Q2Q8WVN8 375 aa7.28□□□□□ -1.24
R3HDM1-216ENST00000483065 V9GY48 417 aaPredicted RBP7.28□□□□□ -1.24
R3HDM1-216ENST00000483065 CARNS1A5YM72 827 aa7.27□□□□□ -1.25
R3HDM1-216ENST00000483065 SLC34A2O95436 690 aa7.27□□□□□ -1.25
R3HDM1-216ENST00000483065 NOP9Q86U38 636 aaKnown RBP7.27□□□□□ -1.25
R3HDM1-216ENST00000483065 CERS3Q8IU89 383 aa7.27□□□□□ -1.25
R3HDM1-216ENST00000483065 TFIP11Q9UBB9 837 aaKnown RBP7.27□□□□□ -1.25
R3HDM1-216ENST00000483065 ZC3H4Q9UPT8 1303 aaKnown RBP7.27□□□□□ -1.25
R3HDM1-216ENST00000483065 CLSTN1O94985 981 aa7.26□□□□□ -1.25
R3HDM1-216ENST00000483065 USP17L8P0C7I0 530 aa7.26□□□□□ -1.25
R3HDM1-216ENST00000483065 KRTAP1-3Q8IUG1 177 aa7.26□□□□□ -1.25
R3HDM1-216ENST00000483065 ALG2Q9H553 416 aa7.26□□□□□ -1.25
R3HDM1-216ENST00000483065 SPTLC1O15269 473 aa7.25□□□□□ -1.25
R3HDM1-216ENST00000483065 SEMA3FQ13275 785 aa7.25□□□□□ -1.25
R3HDM1-216ENST00000483065 NUTM1Q86Y26 1132 aa7.25□□□□□ -1.25
R3HDM1-216ENST00000483065 ADAMTS19Q8TE59 1207 aa7.25□□□□□ -1.25
R3HDM1-216ENST00000483065 EPAS1Q99814 870 aa7.25□□□□□ -1.25
R3HDM1-216ENST00000483065 LIMD1Q9UGP4 676 aa7.25□□□□□ -1.25
R3HDM1-216ENST00000483065 TMA7Q9Y2S6 64 aaKnown RBP7.25□□□□□ -1.25
R3HDM1-216ENST00000483065 SOWAHDA6NJG2 315 aa7.24□□□□□ -1.25
R3HDM1-216ENST00000483065 XP32Q5T750 250 aa7.24□□□□□ -1.25
R3HDM1-216ENST00000483065 METTL3Q86U44 580 aaKnown RBP7.24□□□□□ -1.25
R3HDM1-216ENST00000483065 KCNK17Q96T54 332 aa7.24□□□□□ -1.25
R3HDM1-216ENST00000483065 SLC4A5Q9BY07 1137 aa7.24□□□□□ -1.25
R3HDM1-216ENST00000483065 BCCIPQ9P287 314 aaKnown RBP eCLIP7.24□□□□□ -1.25
R3HDM1-216ENST00000483065 MAFBQ9Y5Q3 323 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-216ENST00000483065 PLEKHD1A6NEE1 506 aa7.23□□□□□ -1.25
R3HDM1-216ENST00000483065 NUTM2BA6NNL0 878 aaPredicted RBP7.23□□□□□ -1.25
R3HDM1-216ENST00000483065 NUTM2EB1AL46 878 aaPredicted RBP7.23□□□□□ -1.25
R3HDM1-216ENST00000483065 NUTM2DQ5VT03 806 aaPredicted RBP7.23□□□□□ -1.25
R3HDM1-216ENST00000483065 NUTM2AQ8IVF1 878 aaPredicted RBP7.23□□□□□ -1.25
R3HDM1-216ENST00000483065 CERKQ8TCT0 537 aa7.23□□□□□ -1.25
R3HDM1-216ENST00000483065 BIN2Q9UBW5 565 aaPredicted RBP7.23□□□□□ -1.25
R3HDM1-216ENST00000483065 KDM4FA0A1W2PPD8 638 aa7.22□□□□□ -1.25
R3HDM1-216ENST00000483065 CDCA8Q53HL2 280 aa7.22□□□□□ -1.25
R3HDM1-216ENST00000483065 PRPF38BQ5VTL8 546 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-216ENST00000483065 MRPL50Q8N5N7 158 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-216ENST00000483065 KCNH8Q96L42 1107 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms